; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS028253 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028253
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-induced protein 15A-like
Genome locationscaffold47:1108597..1108899
RNA-Seq ExpressionMS028253
SyntenyMS028253
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022135745.1 auxin-induced protein 15A-like [Momordica charantia]3.8e-4283.84Show/hide
Query:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLND
        MGFRLPSI+HAK SLRRS ++GNGASP++ D PKGYFTVY GEGQKKRFVIPLSYLNQP FQDLLSQAEEEFGY+HPMGGITIPC+E+IF+NLT SLND
Subjt:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLND

XP_022135746.1 auxin-induced protein 15A-like [Momordica charantia]1.3e-50100Show/hide
Query:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLNDS
        MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLNDS
Subjt:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLNDS

XP_022952256.1 indole-3-acetic acid-induced protein ARG7-like [Cucurbita moschata]1.8e-4489.9Show/hide
Query:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLND
        MGFRLPSIIHAKPSLR ST+SGNGASPK +DVPKGYFTVYVGEGQKKRFVIPLSYLNQP FQDLLSQAEEEFGYDHPMGGITIPCNED FVNL RS ++
Subjt:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLND

XP_022969518.1 auxin-induced protein X10A-like [Cucurbita maxima]2.9e-4284Show/hide
Query:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLNDS
        MGFRLP I+HAK SL+RS++SGNGAS K++DVPKGYFTVYVGE QKKRFVIPLSYLNQPSFQDLLSQAEEEFGY+HPMGGIT+PC+ED F++LTRSLNDS
Subjt:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLNDS

XP_023554216.1 indole-3-acetic acid-induced protein ARG7-like [Cucurbita pepo subsp. pepo]8.2e-4590.91Show/hide
Query:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLND
        MGFRLPSIIHAKPSLRRST+SGNGASPK LDVPKGYFTVYVGEGQKK FVIPLSYLNQP FQDLLSQAEEEFGYDHPMGGITIPCNED FVNL RS ++
Subjt:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLND

TrEMBL top hitse value%identityAlignment
A0A6J1C1L6 auxin-induced protein 15A-like6.3e-51100Show/hide
Query:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLNDS
        MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLNDS
Subjt:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLNDS

A0A6J1C1X1 auxin-induced protein 15A-like1.8e-4283.84Show/hide
Query:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLND
        MGFRLPSI+HAK SLRRS ++GNGASP++ D PKGYFTVY GEGQKKRFVIPLSYLNQP FQDLLSQAEEEFGY+HPMGGITIPC+E+IF+NLT SLND
Subjt:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLND

A0A6J1C5R3 auxin-induced protein 15A-like2.4e-4283Show/hide
Query:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLNDS
        MGFRLP I+HAK SLRRS+++GNGASPK++DVPKGYFTVYVGE QKKRFVIPLSYLN+PSFQDLL QAEEEFGYDHPMGGITIPC+ED F++LT+SLN+S
Subjt:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLNDS

A0A6J1GJR3 indole-3-acetic acid-induced protein ARG7-like8.8e-4589.9Show/hide
Query:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLND
        MGFRLPSIIHAKPSLR ST+SGNGASPK +DVPKGYFTVYVGEGQKKRFVIPLSYLNQP FQDLLSQAEEEFGYDHPMGGITIPCNED FVNL RS ++
Subjt:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLND

A0A6J1I180 auxin-induced protein X10A-like1.4e-4284Show/hide
Query:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLNDS
        MGFRLP I+HAK SL+RS++SGNGAS K++DVPKGYFTVYVGE QKKRFVIPLSYLNQPSFQDLLSQAEEEFGY+HPMGGIT+PC+ED F++LTRSLNDS
Subjt:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLNDS

SwissProt top hitse value%identityAlignment
P32295 Indole-3-acetic acid-induced protein ARG78.5e-2964.29Show/hide
Query:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLN
        MGFRLP I       R++ ++ N AS K LD PKGY  VYVGE   KRFVIP+S+LNQP FQDLLSQAEEEFGYDHPMGG+TIPC+ED+F ++T  L+
Subjt:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLN

P33079 Auxin-induced protein 10A58.0e-2758.59Show/hide
Query:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLND
        MGFR+  I+      RR++     A+ K +DVPKGY  VYVG+ + +RF IP+SYLN+PSFQ+LLSQAEEEFGYDHPMGG+TIPC E+ F+N+T  LN+
Subjt:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLND

P33080 Auxin-induced protein X10A5.9e-3063.64Show/hide
Query:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLND
        MGFRLP I       R+++ + N AS KS++VPKGY  VYVG+ + +RF+IP+SYLNQPSFQDLL+QAEEEFGYDHPMGG+TIPC ED F+ +T  LND
Subjt:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLND

P33081 Auxin-induced protein 15A2.8e-2763.27Show/hide
Query:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLN
        MGFRLP I  A                K+ D PKGY  VYVGE + KRFVIP+SYLNQPSFQDLLSQAEEEFGYDHPMGG+TIPC+ED+F  +T  LN
Subjt:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLN

P33083 Auxin-induced protein 6B3.2e-2863.27Show/hide
Query:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLN
        MGFRLP I       R+++ S N AS K++DV KGY  VYVGE + +RFVIP+SYLN+PSFQDLLSQAEEEFGY HP GG+TIPC+ED+F ++T  LN
Subjt:  MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLN

Arabidopsis top hitse value%identityAlignment
AT4G38840.1 SAUR-like auxin-responsive protein family1.4e-2957.58Show/hide
Query:  MGFRLPSIIH-AKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLN
        M  R+P ++  +K  LR++    + +S  SLDVPKGY  VYVGE   KRFV+P+SYL+QPSFQDLL +AEEEFG+DHPMGG+TIPC+E+IF++L    N
Subjt:  MGFRLPSIIH-AKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLN

AT5G18010.1 SAUR-like auxin-responsive protein family3.1e-2659.34Show/hide
Query:  SIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSL
        S++ AK  L RST +G+ A       PKG+  VYVGE QKKR+++PLSYL+QPSFQ LLS++EEEFG+ HPMGG+TIPC ED F+N+T  L
Subjt:  SIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSL

AT5G18020.1 SAUR-like auxin-responsive protein family4.8e-2761.36Show/hide
Query:  SIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLT
        S++ AK  L RSTT+ + A       PKG+  VYVGE QKKR+++P+SYLNQPSFQ LLS++EEEFG+DHPMGG+TIPC ED F+N+T
Subjt:  SIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLT

AT5G18050.1 SAUR-like auxin-responsive protein family1.1e-2659.34Show/hide
Query:  SIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSL
        S++ AK  L RST + + A       PKG+  VYVGE QKKR+++PLSYLNQPSFQ LLS++E+EFG+DHPMGG+TIPC+ED F+N+T  L
Subjt:  SIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSL

AT5G18080.1 SAUR-like auxin-responsive protein family3.7e-2760.44Show/hide
Query:  SIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSL
        S++ AK  L RST +G+ A       PKG+  VYVGE QKKR+++P+SYLNQPSFQ LLS++EEEFG+DHPMGG+TIPC ED F+N+T  L
Subjt:  SIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTCCGTTTGCCTAGTATTATTCATGCTAAACCAAGTCTTCGACGATCAACAACTTCAGGAAATGGAGCATCTCCAAAGTCTCTAGATGTTCCAAAGGGATACTT
TACAGTCTATGTTGGAGAAGGACAGAAGAAGCGTTTCGTCATCCCTTTATCTTACTTGAACCAGCCTTCGTTTCAAGATCTGCTGAGCCAAGCTGAAGAAGAATTTGGAT
ATGATCATCCAATGGGTGGCATCACAATTCCCTGTAATGAAGACATTTTCGTTAATCTTACTCGTAGTCTAAATGACTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGTTCCGTTTGCCTAGTATTATTCATGCTAAACCAAGTCTTCGACGATCAACAACTTCAGGAAATGGAGCATCTCCAAAGTCTCTAGATGTTCCAAAGGGATACTT
TACAGTCTATGTTGGAGAAGGACAGAAGAAGCGTTTCGTCATCCCTTTATCTTACTTGAACCAGCCTTCGTTTCAAGATCTGCTGAGCCAAGCTGAAGAAGAATTTGGAT
ATGATCATCCAATGGGTGGCATCACAATTCCCTGTAATGAAGACATTTTCGTTAATCTTACTCGTAGTCTAAATGACTCATGA
Protein sequenceShow/hide protein sequence
MGFRLPSIIHAKPSLRRSTTSGNGASPKSLDVPKGYFTVYVGEGQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCNEDIFVNLTRSLNDS