; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS028255 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028255
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationscaffold47:1126370..1126624
RNA-Seq ExpressionMS028255
SyntenyMS028255
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049710.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa]1.0e-3580.95Show/hide
Query:  MGLRQLLRRNQGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHLNDL
        M LR LL+RN+GVS+VPKGYCAVYVG++QKKRF+IP+AYLN+PCFQELLCQTEEEFG++HPMGGLTIHCRDDIF + ISH+NDL
Subjt:  MGLRQLLRRNQGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHLNDL

KAE8645660.1 hypothetical protein Csa_020551 [Cucumis sativus]1.4e-3486.08Show/hide
Query:  MGLRQLLRRNQGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLIS
        MG+RQLL+RNQGVS++PKGYCAVYVGENQKKRFVIP+ +LNQ CFQELL QTEE+FG+HHPMGGLTIHCRDDIFTDLIS
Subjt:  MGLRQLLRRNQGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLIS

KAG6572089.1 Auxin-responsive protein SAUR23, partial [Cucurbita argyrosperma subsp. sororia]3.4e-2873.56Show/hide
Query:  MGLRQLLRR-----NQGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHLN
        M L QLLRR      +GV+ VPKGYCAVYVGE QKKRFVIPV YLNQPCFQ+LL Q E+EFG++HPMGGLTI CR+DIFT+LIS LN
Subjt:  MGLRQLLRR-----NQGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHLN

XP_011658582.1 auxin-responsive protein SAUR24 [Cucumis sativus]5.5e-3480.95Show/hide
Query:  MGLRQLLRRNQGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHLNDL
        M L  LL+R+QGVSS+PKGYCAVYVGE+QKKRF+IP++YLNQPCFQELL QTEEEFG+HHPMGGLTIHC+D IFT+LIS LNDL
Subjt:  MGLRQLLRRNQGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHLNDL

XP_022136192.1 auxin-responsive protein SAUR24-like [Momordica charantia]1.3e-3889.29Show/hide
Query:  MGLRQLLRRNQGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHLNDL
        MGLRQLL+RNQGVS+VPKGYCAVYVGE+QKKRFVIP++YLNQPCFQELLCQ EEEFG++HPMGGLTIHCRDDIFTDLIS LNDL
Subjt:  MGLRQLLRRNQGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHLNDL

TrEMBL top hitse value%identityAlignment
A0A0A0K4K1 Uncharacterized protein1.7e-3683.33Show/hide
Query:  MGLRQLLRRNQGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHLNDL
        M L+ LL+RNQGVS+VPKGYCAVYVGE+QKKRFVIP+ YLN+PCFQ+LLCQTEEEFG++HPMGGLTIHCRDDIFTDLIS++NDL
Subjt:  MGLRQLLRRNQGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHLNDL

A0A0A0K5U4 Uncharacterized protein2.6e-3480.95Show/hide
Query:  MGLRQLLRRNQGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHLNDL
        M L  LL+R+QGVSS+PKGYCAVYVGE+QKKRF+IP++YLNQPCFQELL QTEEEFG+HHPMGGLTIHC+D IFT+LIS LNDL
Subjt:  MGLRQLLRRNQGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHLNDL

A0A0A0K5V1 Uncharacterized protein9.4e-3277.27Show/hide
Query:  MGLRQLLRR-----NQGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHLND
        MGLR+LLRR     NQ VS VPKGYCAVYVGENQKKRFVIP+ YLNQPCFQ+LL QT EEF ++HPMGGLT HC DDIF DLISHLN+
Subjt:  MGLRQLLRR-----NQGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHLND

A0A5A7U363 Auxin-induced protein 15A-like4.8e-3680.95Show/hide
Query:  MGLRQLLRRNQGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHLNDL
        M LR LL+RN+GVS+VPKGYCAVYVG++QKKRF+IP+AYLN+PCFQELLCQTEEEFG++HPMGGLTIHCRDDIF + ISH+NDL
Subjt:  MGLRQLLRRNQGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHLNDL

A0A6J1C4W2 auxin-responsive protein SAUR24-like6.1e-3989.29Show/hide
Query:  MGLRQLLRRNQGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHLNDL
        MGLRQLL+RNQGVS+VPKGYCAVYVGE+QKKRFVIP++YLNQPCFQELLCQ EEEFG++HPMGGLTIHCRDDIFTDLIS LNDL
Subjt:  MGLRQLLRRNQGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHLNDL

SwissProt top hitse value%identityAlignment
Q41220 Auxin-responsive protein SAUR153.2e-2155.42Show/hide
Query:  MGLRQLLRRNQGVSSVPKGYCAVYVGEN--QKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHL
        +G +Q++RR    SS P+G+ AVYVGEN  +KKR+V+PV+YLNQP FQ+LL ++EEEFG+ HPMGGLTI C + +F  + S +
Subjt:  MGLRQLLRRNQGVSSVPKGYCAVYVGEN--QKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHL

Q9FJF6 Auxin-responsive protein SAUR231.5e-2159.74Show/hide
Query:  LLRRNQGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHLN
        L R    VS+ PKG+ AVYVGE+QKKR+++P++YLNQP FQ LL ++EEEFGF HPMGGLTI C +D F ++ S L+
Subjt:  LLRRNQGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHLN

Q9FJF7 Auxin-responsive protein SAUR223.8e-2256.1Show/hide
Query:  MGLRQLLRRN-QGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHL
        +G +++L R+   VS+ PKG+ AVYVGE+QKKR+++P++YLNQP FQ LL ++E+EFGF HPMGGLTI C +D F ++ S L
Subjt:  MGLRQLLRRN-QGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHL

Q9FJG0 Auxin-responsive protein SAUR201.5e-2156.25Show/hide
Query:  MGLRQLLRRN-QGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLIS
        +G +++L R+    S+ PKG+ AVYVGE+QKKR+++P++YLNQP FQ LL ++EEEFGF HPMGGLTI C +D F ++ S
Subjt:  MGLRQLLRRN-QGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLIS

Q9FK62 Auxin-responsive protein SAUR247.7e-2358.54Show/hide
Query:  MGLRQLLRRNQGV-SSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHL
        +G +++L R+ G  S+ PKG+ AVYVGE+QKKR+++PV+YLNQP FQ LL ++EEEFGF HPMGGLTI C +D F ++ S L
Subjt:  MGLRQLLRRNQGV-SSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHL

Arabidopsis top hitse value%identityAlignment
AT4G38840.1 SAUR-like auxin-responsive protein family2.7e-2358.62Show/hide
Query:  RQLLRRNQGVSS--------VPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHLN
        +Q+LR+ + +SS        VPKGY AVYVGE   KRFV+PV+YL+QP FQ+LL + EEEFGF HPMGGLTI C ++IF DL S  N
Subjt:  RQLLRRNQGVSS--------VPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHLN

AT5G18020.1 SAUR-like auxin-responsive protein family1.0e-2256.25Show/hide
Query:  MGLRQLLRRN-QGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLIS
        +G +++L R+    S+ PKG+ AVYVGE+QKKR+++P++YLNQP FQ LL ++EEEFGF HPMGGLTI C +D F ++ S
Subjt:  MGLRQLLRRN-QGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLIS

AT5G18050.1 SAUR-like auxin-responsive protein family2.7e-2356.1Show/hide
Query:  MGLRQLLRRN-QGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHL
        +G +++L R+   VS+ PKG+ AVYVGE+QKKR+++P++YLNQP FQ LL ++E+EFGF HPMGGLTI C +D F ++ S L
Subjt:  MGLRQLLRRN-QGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHL

AT5G18060.1 SAUR-like auxin-responsive protein family1.0e-2259.74Show/hide
Query:  LLRRNQGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHLN
        L R    VS+ PKG+ AVYVGE+QKKR+++P++YLNQP FQ LL ++EEEFGF HPMGGLTI C +D F ++ S L+
Subjt:  LLRRNQGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHLN

AT5G18080.1 SAUR-like auxin-responsive protein family5.5e-2458.54Show/hide
Query:  MGLRQLLRRNQGV-SSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHL
        +G +++L R+ G  S+ PKG+ AVYVGE+QKKR+++PV+YLNQP FQ LL ++EEEFGF HPMGGLTI C +D F ++ S L
Subjt:  MGLRQLLRRNQGV-SSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCTTCGCCAGCTTCTCAGAAGAAATCAAGGAGTTTCATCAGTTCCCAAGGGCTATTGTGCAGTATATGTTGGAGAGAACCAAAAGAAGCGGTTCGTGATCCCAGT
CGCTTACTTGAATCAGCCATGTTTCCAAGAGTTGCTTTGTCAGACTGAAGAAGAATTCGGTTTTCACCATCCAATGGGTGGTCTTACTATCCATTGCAGAGACGATATTT
TCACCGATCTCATCTCCCATTTGAATGATCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCTTCGCCAGCTTCTCAGAAGAAATCAAGGAGTTTCATCAGTTCCCAAGGGCTATTGTGCAGTATATGTTGGAGAGAACCAAAAGAAGCGGTTCGTGATCCCAGT
CGCTTACTTGAATCAGCCATGTTTCCAAGAGTTGCTTTGTCAGACTGAAGAAGAATTCGGTTTTCACCATCCAATGGGTGGTCTTACTATCCATTGCAGAGACGATATTT
TCACCGATCTCATCTCCCATTTGAATGATCTATAA
Protein sequenceShow/hide protein sequence
MGLRQLLRRNQGVSSVPKGYCAVYVGENQKKRFVIPVAYLNQPCFQELLCQTEEEFGFHHPMGGLTIHCRDDIFTDLISHLNDL