; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS028256 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028256
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationscaffold47:1131192..1131446
RNA-Seq ExpressionMS028256
SyntenyMS028256
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049710.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa]2.6e-3684.52Show/hide
Query:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHLNDL
        M LR LLKRN+GVSAVPKGYCAVYVG+SQKKRF+IPI YLN+PCFQELLC TEEEFG+YHPMGGLTIHCRDDIF + ISH+NDL
Subjt:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHLNDL

KAE8645660.1 hypothetical protein Csa_020551 [Cucumis sativus]1.2e-3386.08Show/hide
Query:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLIS
        MG+RQLLKRNQGVS +PKGYCAVYVGE+QKKRFVIPIT+LNQ CFQELL  TEE+FG++HPMGGLTIHCRDDIFTDLIS
Subjt:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLIS

KAG6572089.1 Auxin-responsive protein SAUR23, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2872.41Show/hide
Query:  MGLRQLLKR-----NQGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHLN
        M L QLL+R      +GV+ VPKGYCAVYVGE QKKRFVIP+TYLNQPCFQ+LL   E+EFG+YHPMGGLTI CR+DIFT+LIS LN
Subjt:  MGLRQLLKR-----NQGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHLN

XP_011658582.1 auxin-responsive protein SAUR24 [Cucumis sativus]4.6e-3380.95Show/hide
Query:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHLNDL
        M L  LLKR+QGVS++PKGYCAVYVGESQKKRF+IPI+YLNQPCFQELL  TEEEFG++HPMGGLTIHC+D IFT+LIS LNDL
Subjt:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHLNDL

XP_022136192.1 auxin-responsive protein SAUR24-like [Momordica charantia]1.1e-3994.05Show/hide
Query:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHLNDL
        MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPI+YLNQPCFQELLC  EEEFG+YHPMGGLTIHCRDDIFTDLIS LNDL
Subjt:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHLNDL

TrEMBL top hitse value%identityAlignment
A0A0A0K4K1 Uncharacterized protein3.9e-3889.29Show/hide
Query:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHLNDL
        M L+ LLKRNQGVSAVPKGYCAVYVGESQKKRFVIPITYLN+PCFQ+LLC TEEEFG+YHPMGGLTIHCRDDIFTDLIS++NDL
Subjt:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHLNDL

A0A0A0K5U4 Uncharacterized protein2.2e-3380.95Show/hide
Query:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHLNDL
        M L  LLKR+QGVS++PKGYCAVYVGESQKKRF+IPI+YLNQPCFQELL  TEEEFG++HPMGGLTIHC+D IFT+LIS LNDL
Subjt:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHLNDL

A0A0A0K5V1 Uncharacterized protein2.1e-3177.27Show/hide
Query:  MGLRQLLKR-----NQGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHLND
        MGLR+LL+R     NQ VS VPKGYCAVYVGE+QKKRFVIPITYLNQPCFQ+LL  T EEF +YHPMGGLT HC DDIF DLISHLN+
Subjt:  MGLRQLLKR-----NQGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHLND

A0A5A7U363 Auxin-induced protein 15A-like1.3e-3684.52Show/hide
Query:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHLNDL
        M LR LLKRN+GVSAVPKGYCAVYVG+SQKKRF+IPI YLN+PCFQELLC TEEEFG+YHPMGGLTIHCRDDIF + ISH+NDL
Subjt:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHLNDL

A0A6J1C4W2 auxin-responsive protein SAUR24-like5.5e-4094.05Show/hide
Query:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHLNDL
        MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPI+YLNQPCFQELLC  EEEFG+YHPMGGLTIHCRDDIFTDLIS LNDL
Subjt:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHLNDL

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR238.5e-2260Show/hide
Query:  RQLLKRN-QGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHLN
        +++L R+   VSA PKG+ AVYVGESQKKR+++P++YLNQP FQ LL  +EEEFGF HPMGGLTI C +D F ++ S L+
Subjt:  RQLLKRN-QGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHLN

Q9FJF7 Auxin-responsive protein SAUR221.3e-2258.54Show/hide
Query:  MGLRQLLKRN-QGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHL
        +G +++L R+   VSA PKG+ AVYVGESQKKR+++P++YLNQP FQ LL  +E+EFGF HPMGGLTI C +D F ++ S L
Subjt:  MGLRQLLKRN-QGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHL

Q9FJG0 Auxin-responsive protein SAUR205.0e-2260Show/hide
Query:  MGLRQLLKRN-QGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLIS
        +G +++L R+    SA PKG+ AVYVGESQKKR+++PI+YLNQP FQ LL  +EEEFGF HPMGGLTI C +D F ++ S
Subjt:  MGLRQLLKRN-QGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLIS

Q9FJG1 Auxin-responsive protein SAUR198.5e-2257.32Show/hide
Query:  MGLRQLLKRNQGV-SAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHL
        +G +++L R+    SA PKG+ AVYVGESQKKR+++P++YL+QP FQ LL  +EEEFGF HPMGGLTI C +D F ++ S L
Subjt:  MGLRQLLKRNQGV-SAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHL

Q9FK62 Auxin-responsive protein SAUR244.5e-2359.76Show/hide
Query:  MGLRQLLKRNQGV-SAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHL
        +G +++L R+ G  SA PKG+ AVYVGESQKKR+++P++YLNQP FQ LL  +EEEFGF HPMGGLTI C +D F ++ S L
Subjt:  MGLRQLLKRNQGV-SAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHL

Arabidopsis top hitse value%identityAlignment
AT5G18010.1 SAUR-like auxin-responsive protein family6.0e-2357.32Show/hide
Query:  MGLRQLLKRNQGV-SAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHL
        +G +++L R+    SA PKG+ AVYVGESQKKR+++P++YL+QP FQ LL  +EEEFGF HPMGGLTI C +D F ++ S L
Subjt:  MGLRQLLKRNQGV-SAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHL

AT5G18020.1 SAUR-like auxin-responsive protein family3.5e-2360Show/hide
Query:  MGLRQLLKRN-QGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLIS
        +G +++L R+    SA PKG+ AVYVGESQKKR+++PI+YLNQP FQ LL  +EEEFGF HPMGGLTI C +D F ++ S
Subjt:  MGLRQLLKRN-QGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLIS

AT5G18050.1 SAUR-like auxin-responsive protein family9.3e-2458.54Show/hide
Query:  MGLRQLLKRN-QGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHL
        +G +++L R+   VSA PKG+ AVYVGESQKKR+++P++YLNQP FQ LL  +E+EFGF HPMGGLTI C +D F ++ S L
Subjt:  MGLRQLLKRN-QGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHL

AT5G18060.1 SAUR-like auxin-responsive protein family6.0e-2360Show/hide
Query:  RQLLKRN-QGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHLN
        +++L R+   VSA PKG+ AVYVGESQKKR+++P++YLNQP FQ LL  +EEEFGF HPMGGLTI C +D F ++ S L+
Subjt:  RQLLKRN-QGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHLN

AT5G18080.1 SAUR-like auxin-responsive protein family3.2e-2459.76Show/hide
Query:  MGLRQLLKRNQGV-SAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHL
        +G +++L R+ G  SA PKG+ AVYVGESQKKR+++P++YLNQP FQ LL  +EEEFGF HPMGGLTI C +D F ++ S L
Subjt:  MGLRQLLKRNQGV-SAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCTTCGCCAACTTCTTAAAAGAAACCAAGGAGTTTCAGCAGTTCCCAAGGGCTACTGTGCAGTCTATGTTGGAGAGAGCCAAAAGAAGCGGTTCGTGATCCCGAT
AACTTACTTGAATCAACCATGCTTTCAAGAGTTGCTTTGTCATACTGAAGAAGAATTTGGTTTCTATCATCCTATGGGTGGTCTTACAATCCATTGCAGAGACGATATCT
TCACCGATCTCATCTCCCATTTGAATGATCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCTTCGCCAACTTCTTAAAAGAAACCAAGGAGTTTCAGCAGTTCCCAAGGGCTACTGTGCAGTCTATGTTGGAGAGAGCCAAAAGAAGCGGTTCGTGATCCCGAT
AACTTACTTGAATCAACCATGCTTTCAAGAGTTGCTTTGTCATACTGAAGAAGAATTTGGTTTCTATCATCCTATGGGTGGTCTTACAATCCATTGCAGAGACGATATCT
TCACCGATCTCATCTCCCATTTGAATGATCTATGA
Protein sequenceShow/hide protein sequence
MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCHTEEEFGFYHPMGGLTIHCRDDIFTDLISHLNDL