; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS028257 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028257
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAuxin-responsive protein
Genome locationscaffold47:1132716..1132970
RNA-Seq ExpressionMS028257
SyntenyMS028257
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049710.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa]4.5e-3684.52Show/hide
Query:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRLNDL
        M LR LLKRN+GVSAVPKGYCAVYVG+SQKKRF+IPI+YLN+PCFQELLCQ EEEFGYYHPMGGLTIHCRDDIF + IS +NDL
Subjt:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRLNDL

KAE8645660.1 hypothetical protein Csa_020551 [Cucumis sativus]2.5e-3486.25Show/hide
Query:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISR
        MG+RQLLKRNQGVS +PKGYCAVYVGE+QKKRFVIPI++LNQ CFQELL Q EE+FGY+HPMGGLTIHCRDDIFTDLISR
Subjt:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISR

KAG6572089.1 Auxin-responsive protein SAUR23, partial [Cucurbita argyrosperma subsp. sororia]6.3e-3074.71Show/hide
Query:  MGLRQLLKR-----NQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRLN
        M L QLL+R      +GV+ VPKGYCAVYVGE QKKRFVIP++YLNQPCFQ+LL QAE+EFGYYHPMGGLTI CR+DIFT+LIS+LN
Subjt:  MGLRQLLKR-----NQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRLN

XP_011658582.1 auxin-responsive protein SAUR24 [Cucumis sativus]1.4e-3484.52Show/hide
Query:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRLNDL
        M L  LLKR+QGVS++PKGYCAVYVGESQKKRF+IPISYLNQPCFQELL Q EEEFGY+HPMGGLTIHC+D IFT+LISRLNDL
Subjt:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRLNDL

XP_022136192.1 auxin-responsive protein SAUR24-like [Momordica charantia]3.2e-42100Show/hide
Query:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRLNDL
        MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRLNDL
Subjt:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRLNDL

TrEMBL top hitse value%identityAlignment
A0A0A0K4K1 Uncharacterized protein3.9e-3889.29Show/hide
Query:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRLNDL
        M L+ LLKRNQGVSAVPKGYCAVYVGESQKKRFVIPI+YLN+PCFQ+LLCQ EEEFGYYHPMGGLTIHCRDDIFTDLIS +NDL
Subjt:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRLNDL

A0A0A0K5U4 Uncharacterized protein7.0e-3584.52Show/hide
Query:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRLNDL
        M L  LLKR+QGVS++PKGYCAVYVGESQKKRF+IPISYLNQPCFQELL Q EEEFGY+HPMGGLTIHC+D IFT+LISRLNDL
Subjt:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRLNDL

A0A0A0K5V1 Uncharacterized protein1.0e-3076.14Show/hide
Query:  MGLRQLLKR-----NQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRLND
        MGLR+LL+R     NQ VS VPKGYCAVYVGE+QKKRFVIPI+YLNQPCFQ+LL Q  EEF YYHPMGGLT HC DDIF DLIS LN+
Subjt:  MGLRQLLKR-----NQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRLND

A0A5A7U363 Auxin-induced protein 15A-like2.2e-3684.52Show/hide
Query:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRLNDL
        M LR LLKRN+GVSAVPKGYCAVYVG+SQKKRF+IPI+YLN+PCFQELLCQ EEEFGYYHPMGGLTIHCRDDIF + IS +NDL
Subjt:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRLNDL

A0A6J1C4W2 auxin-responsive protein SAUR24-like1.5e-42100Show/hide
Query:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRLNDL
        MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRLNDL
Subjt:  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRLNDL

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR231.0e-2261.25Show/hide
Query:  RQLLKRN-QGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRLN
        +++L R+   VSA PKG+ AVYVGESQKKR+++P+SYLNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ SRL+
Subjt:  RQLLKRN-QGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRLN

Q9FJF7 Auxin-responsive protein SAUR221.5e-2359.76Show/hide
Query:  MGLRQLLKRN-QGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRL
        +G +++L R+   VSA PKG+ AVYVGESQKKR+++P+SYLNQP FQ LL ++E+EFG+ HPMGGLTI C +D F ++ SRL
Subjt:  MGLRQLLKRN-QGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRL

Q9FJG0 Auxin-responsive protein SAUR205.9e-2360.49Show/hide
Query:  MGLRQLLKRN-QGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISR
        +G +++L R+    SA PKG+ AVYVGESQKKR+++PISYLNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ SR
Subjt:  MGLRQLLKRN-QGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISR

Q9FJG1 Auxin-responsive protein SAUR191.0e-2258.54Show/hide
Query:  MGLRQLLKRNQGV-SAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRL
        +G +++L R+    SA PKG+ AVYVGESQKKR+++P+SYL+QP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ SRL
Subjt:  MGLRQLLKRNQGV-SAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRL

Q9FK62 Auxin-responsive protein SAUR245.3e-2460.98Show/hide
Query:  MGLRQLLKRNQGV-SAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRL
        +G +++L R+ G  SA PKG+ AVYVGESQKKR+++P+SYLNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ SRL
Subjt:  MGLRQLLKRNQGV-SAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRL

Arabidopsis top hitse value%identityAlignment
AT5G18010.1 SAUR-like auxin-responsive protein family7.1e-2458.54Show/hide
Query:  MGLRQLLKRNQGV-SAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRL
        +G +++L R+    SA PKG+ AVYVGESQKKR+++P+SYL+QP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ SRL
Subjt:  MGLRQLLKRNQGV-SAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRL

AT5G18020.1 SAUR-like auxin-responsive protein family4.2e-2460.49Show/hide
Query:  MGLRQLLKRN-QGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISR
        +G +++L R+    SA PKG+ AVYVGESQKKR+++PISYLNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ SR
Subjt:  MGLRQLLKRN-QGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISR

AT5G18050.1 SAUR-like auxin-responsive protein family1.1e-2459.76Show/hide
Query:  MGLRQLLKRN-QGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRL
        +G +++L R+   VSA PKG+ AVYVGESQKKR+++P+SYLNQP FQ LL ++E+EFG+ HPMGGLTI C +D F ++ SRL
Subjt:  MGLRQLLKRN-QGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRL

AT5G18060.1 SAUR-like auxin-responsive protein family7.1e-2461.25Show/hide
Query:  RQLLKRN-QGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRLN
        +++L R+   VSA PKG+ AVYVGESQKKR+++P+SYLNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ SRL+
Subjt:  RQLLKRN-QGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRLN

AT5G18080.1 SAUR-like auxin-responsive protein family3.8e-2560.98Show/hide
Query:  MGLRQLLKRNQGV-SAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRL
        +G +++L R+ G  SA PKG+ AVYVGESQKKR+++P+SYLNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ SRL
Subjt:  MGLRQLLKRNQGV-SAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCTTCGCCAGCTTCTTAAAAGAAACCAAGGAGTTTCGGCCGTTCCCAAGGGCTATTGTGCAGTTTATGTTGGAGAAAGCCAAAAGAAGCGGTTTGTGATCCCAAT
AAGTTACTTGAATCAGCCATGTTTTCAAGAGTTGCTTTGTCAAGCTGAGGAAGAATTCGGTTACTATCATCCTATGGGTGGTCTTACTATCCATTGCAGAGACGACATCT
TCACTGATCTTATCTCTCGCTTGAATGATCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCTTCGCCAGCTTCTTAAAAGAAACCAAGGAGTTTCGGCCGTTCCCAAGGGCTATTGTGCAGTTTATGTTGGAGAAAGCCAAAAGAAGCGGTTTGTGATCCCAAT
AAGTTACTTGAATCAGCCATGTTTTCAAGAGTTGCTTTGTCAAGCTGAGGAAGAATTCGGTTACTATCATCCTATGGGTGGTCTTACTATCCATTGCAGAGACGACATCT
TCACTGATCTTATCTCTCGCTTGAATGATCTATGA
Protein sequenceShow/hide protein sequence
MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYHPMGGLTIHCRDDIFTDLISRLNDL