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MS028258 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028258
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationscaffold47:1134449..1134730
RNA-Seq ExpressionMS028258
SyntenyMS028258
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049711.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa]1.1e-3583.87Show/hide
Query:  MGIRLPGVANAKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLNGS
        MGIRLPGV NAK+ L     NSD IPKGHLAVYVGE QR+RFVVPVSYLSHPSF+ LLSQAEEEFGFHHPMGGLTIPCREEAF+NLT SLNGS
Subjt:  MGIRLPGVANAKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLNGS

XP_004144829.1 auxin-responsive protein SAUR21 [Cucumis sativus]4.5e-3787.1Show/hide
Query:  MGIRLPGVANAKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLNGS
        MGIRLPGV NAK+IL    RNSD IPKGHLAVYVGE QR+RFVVPVSYLSHPSFQ LLSQAEEEFGFHHPMGGLTIPCREEAF+NLT SLNGS
Subjt:  MGIRLPGVANAKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLNGS

XP_008448002.1 PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]3.8e-3684.95Show/hide
Query:  MGIRLPGVANAKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLNGS
        MGIRLPGV NAK+IL     NSD IPKGHLAVYVGE QR+RFVVPVSYLSHPSF+ LLSQAEEEFGFHHPMGGLTIPCREEAF+NLT SLNGS
Subjt:  MGIRLPGVANAKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLNGS

XP_010271402.1 PREDICTED: auxin-induced protein X10A-like [Nelumbo nucifera]4.1e-3069Show/hide
Query:  MGIRLPGVANAKRILR----LADRNSDV---IPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLNGS
        MGIRLPG+ +AK ILR     A+  +     +PKGHLAVYVG  Q++RFVVP+SYL+HPSFQKLL++AEEEFGF HPMGGLTIPC EEAFI+LT SLNGS
Subjt:  MGIRLPGVANAKRILR----LADRNSDV---IPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLNGS

XP_022136191.1 auxin-induced protein X15-like [Momordica charantia]6.9e-46100Show/hide
Query:  MGIRLPGVANAKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLNGS
        MGIRLPGVANAKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLNGS
Subjt:  MGIRLPGVANAKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLNGS

TrEMBL top hitse value%identityAlignment
A0A0A0K2G3 Uncharacterized protein2.2e-3787.1Show/hide
Query:  MGIRLPGVANAKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLNGS
        MGIRLPGV NAK+IL    RNSD IPKGHLAVYVGE QR+RFVVPVSYLSHPSFQ LLSQAEEEFGFHHPMGGLTIPCREEAF+NLT SLNGS
Subjt:  MGIRLPGVANAKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLNGS

A0A1S3BIQ0 auxin-responsive protein SAUR21-like1.8e-3684.95Show/hide
Query:  MGIRLPGVANAKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLNGS
        MGIRLPGV NAK+IL     NSD IPKGHLAVYVGE QR+RFVVPVSYLSHPSF+ LLSQAEEEFGFHHPMGGLTIPCREEAF+NLT SLNGS
Subjt:  MGIRLPGVANAKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLNGS

A0A1U8B690 auxin-induced protein X10A-like2.0e-3069Show/hide
Query:  MGIRLPGVANAKRILR----LADRNSDV---IPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLNGS
        MGIRLPG+ +AK ILR     A+  +     +PKGHLAVYVG  Q++RFVVP+SYL+HPSFQKLL++AEEEFGF HPMGGLTIPC EEAFI+LT SLNGS
Subjt:  MGIRLPGVANAKRILR----LADRNSDV---IPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLNGS

A0A5D3CLW7 Auxin-responsive protein SAUR21-like5.3e-3683.87Show/hide
Query:  MGIRLPGVANAKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLNGS
        MGIRLPGV NAK+ L     NSD IPKGHLAVYVGE QR+RFVVPVSYLSHPSF+ LLSQAEEEFGFHHPMGGLTIPCREEAF+NLT SLNGS
Subjt:  MGIRLPGVANAKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLNGS

A0A6J1C2U6 auxin-induced protein X15-like3.3e-46100Show/hide
Query:  MGIRLPGVANAKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLNGS
        MGIRLPGVANAKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLNGS
Subjt:  MGIRLPGVANAKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLNGS

SwissProt top hitse value%identityAlignment
P33080 Auxin-induced protein X10A2.0e-2457.14Show/hide
Query:  MGIRLPGVANAKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLN
        MG RLPG+         A   S  +PKG+L VYVG+ + RRF++PVSYL+ PSFQ LL+QAEEEFG+ HPMGGLTIPC+E+ F+ +T  LN
Subjt:  MGIRLPGVANAKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLN

P33082 Auxin-induced protein X152.6e-2460.44Show/hide
Query:  MGIRLPGVANAKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLN
        MG RLPG+  A         N+   PKG+LAVYVGE + +RFV+PVSY++ PSFQ LL+QAEEEFG+ HPMGGLTIPC EE F  +TC LN
Subjt:  MGIRLPGVANAKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLN

P33083 Auxin-induced protein 6B2.6e-2460.44Show/hide
Query:  MGIRLPGVANAKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLN
        MG RLPG+  A      A   +  + KG+LAVYVGE + RRFV+PVSYL+ PSFQ LLSQAEEEFG+HHP GGLTIPC E+ F ++T  LN
Subjt:  MGIRLPGVANAKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLN

Q9FJG1 Auxin-responsive protein SAUR191.0e-2363.75Show/hide
Query:  AKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSL
        AK+IL  +       PKG LAVYVGE+Q++R++VP+SYLS PSFQ LLS++EEEFGF HPMGGLTIPC E+ FIN+T  L
Subjt:  AKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSL

Q9FK62 Auxin-responsive protein SAUR241.0e-2363.75Show/hide
Query:  AKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSL
        AK+IL  +       PKG LAVYVGE+Q++R++VPVSYL+ PSFQ LLS++EEEFGF HPMGGLTIPC E+ FIN+T  L
Subjt:  AKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family3.8e-2661.86Show/hide
Query:  MGIRLPGV-ANAKRILRLADRNSD--VIPKGHLAVYVGE-AQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLNGS
        M IR+  V  ++K++L+    +S+   IPKGHLAVYVGE  Q+RRFVVPV+YLSHP FQKLL +AEEEFGF HPMGGLTIPC E+ FI+L   L+ S
Subjt:  MGIRLPGV-ANAKRILRLADRNSD--VIPKGHLAVYVGE-AQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLNGS

AT4G34770.1 SAUR-like auxin-responsive protein family5.5e-2554.81Show/hide
Query:  MGIRLPGVANAKRILR----------LADRNSDVIPKGHLAVYVGEA-QRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCS
        MGI+L G++ AK+ L+          LA   ++ +PKGH+AVYVGE   R+RFV+P+SYL+HP FQ LL+ AEEEFGF HPMGGLTIPC E+ F  L   
Subjt:  MGIRLPGVANAKRILR----------LADRNSDVIPKGHLAVYVGEA-QRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCS

Query:  LNGS
        L+GS
Subjt:  LNGS

AT4G34800.1 SAUR-like auxin-responsive protein family1.1e-2561.36Show/hide
Query:  MGIRLPGVANAKRILRLADRNSDVIPKGHLAVYVGE--AQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINL
        M IRL  V N+K+    + +    +PKGH+AVYVGE    ++RFVVP+SYL+HPSFQ LLS+AEEEFGF+HP+GGLTIPCREE F+ L
Subjt:  MGIRLPGVANAKRILRLADRNSDVIPKGHLAVYVGE--AQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINL

AT4G34810.1 SAUR-like auxin-responsive protein family4.9e-2657.84Show/hide
Query:  MGIRLPGVANA-KRILR---LADRN------SDVIPKGHLAVYVG---EAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLT
        MG+    ++NA K+IL+   LA+RN      SD +PKGH+AVYVG   E +++RFVVP+S+L+HPSF++ LS+AEEEFGF+HPMGGLTIPCREE F++L 
Subjt:  MGIRLPGVANA-KRILR---LADRN------SDVIPKGHLAVYVG---EAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLT

Query:  CS
         S
Subjt:  CS

AT4G38840.1 SAUR-like auxin-responsive protein family5.5e-2559.6Show/hide
Query:  MGIRLPGV-ANAKRILRLA-------DRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLN
        M IR+P V  ++K+ILR A         +S  +PKG+LAVYVGE   +RFVVPVSYL  PSFQ LL +AEEEFGF HPMGGLTIPC EE FI+L    N
Subjt:  MGIRLPGV-ANAKRILRLA-------DRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATTCGTCTACCTGGTGTTGCTAATGCCAAGCGGATTCTGCGATTGGCTGATCGGAATTCGGATGTGATTCCGAAAGGCCACTTGGCTGTTTATGTTGGAGAAGC
ACAGAGGAGGCGCTTTGTTGTTCCAGTTTCATACTTGAGTCATCCTTCTTTCCAAAAATTGCTGAGTCAGGCTGAAGAAGAGTTTGGTTTCCACCATCCCATGGGTGGTC
TCACGATCCCGTGCCGAGAAGAAGCTTTCATTAATCTCACTTGTAGTCTAAATGGCTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATTCGTCTACCTGGTGTTGCTAATGCCAAGCGGATTCTGCGATTGGCTGATCGGAATTCGGATGTGATTCCGAAAGGCCACTTGGCTGTTTATGTTGGAGAAGC
ACAGAGGAGGCGCTTTGTTGTTCCAGTTTCATACTTGAGTCATCCTTCTTTCCAAAAATTGCTGAGTCAGGCTGAAGAAGAGTTTGGTTTCCACCATCCCATGGGTGGTC
TCACGATCCCGTGCCGAGAAGAAGCTTTCATTAATCTCACTTGTAGTCTAAATGGCTCGTGA
Protein sequenceShow/hide protein sequence
MGIRLPGVANAKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQAEEEFGFHHPMGGLTIPCREEAFINLTCSLNGS