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MS028262 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028262
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAuxin responsive SAUR protein
Genome locationscaffold47:1141880..1142164
RNA-Seq ExpressionMS028262
SyntenyMS028262
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049714.1 Auxin responsive SAUR protein [Cucumis melo var. makuwa]1.3e-3684.04Show/hide
Query:  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIFFRHLARNS
        MGI LPRI   KH+ RRIHQ SRTA VPKGHLAVYVG+T +KKRFLVPVAYLSNPSFH+LLSQ+EEEFGYDHPMGGLTFSCTEEIFF HLAR+S
Subjt:  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIFFRHLARNS

KAE8645662.1 hypothetical protein Csa_020396 [Cucumis sativus]5.5e-3582.98Show/hide
Query:  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIFFRHLARNS
        MGI LPRI   KHF  RI Q SRTA VPKGHLAVYVGET +KKRFLVPVAYL NPSFH+LLSQ+EEEFGYDHPMGGLTFSCTEEIFF HLAR+S
Subjt:  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIFFRHLARNS

KAG6572091.1 hypothetical protein SDJN03_28819, partial [Cucurbita argyrosperma subsp. sororia]4.1e-3887.23Show/hide
Query:  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIFFRHLARNS
        MGI LPRIV++KHFLRRI QSSRTA VPKGHLAVYVGET +KKRFLVPVAYL+NPSFHSLLS +EEEFGYDHPMGGLTFSCTEEIFF+HLAR+S
Subjt:  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIFFRHLARNS

XP_021602388.1 auxin-induced protein 15A-like [Manihot esculenta]2.0e-2467.44Show/hide
Query:  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIF
        MGI LPRIVS+K  LRRI  S  T +VPKGH AVYVGE +QKKRF VP++YL +PSF +LLSQ+EEEFG+ HPMGGLT  C+E++F
Subjt:  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIF

XP_022135927.1 indole-3-acetic acid-induced protein ARG7-like [Momordica charantia]1.6e-42100Show/hide
Query:  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIFFR
        MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIFFR
Subjt:  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIFFR

TrEMBL top hitse value%identityAlignment
A0A0A0K4K5 Uncharacterized protein2.7e-3582.98Show/hide
Query:  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIFFRHLARNS
        MGI LPRI   KHF  RI Q SRTA VPKGHLAVYVGET +KKRFLVPVAYL NPSFH+LLSQ+EEEFGYDHPMGGLTFSCTEEIFF HLAR+S
Subjt:  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIFFRHLARNS

A0A199UBQ8 Uncharacterized protein9.5e-2567.44Show/hide
Query:  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIF
        MGI LPRIVS+K  LRRI  S  T +VPKGH AVYVGE +QKKRF VP++YL +PSF +LLSQ+EEEFG+ HPMGGLT  C+E++F
Subjt:  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIF

A0A565C4F5 Uncharacterized protein6.2e-2465.52Show/hide
Query:  MGISLPRIV-SSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIF
        M I +PR++ SSK  L+   QSS   +VPKGHLAVYVGE  QKKRF+VPV YLS+PSF  LL ++EEEFG+DHPMGGLT  CTE+IF
Subjt:  MGISLPRIV-SSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIF

A0A5D3CK22 Auxin responsive SAUR protein6.4e-3784.04Show/hide
Query:  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIFFRHLARNS
        MGI LPRI   KH+ RRIHQ SRTA VPKGHLAVYVG+T +KKRFLVPVAYLSNPSFH+LLSQ+EEEFGYDHPMGGLTFSCTEEIFF HLAR+S
Subjt:  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIFFRHLARNS

A0A6J1C452 indole-3-acetic acid-induced protein ARG7-like7.8e-43100Show/hide
Query:  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIFFR
        MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIFFR
Subjt:  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIFFR

SwissProt top hitse value%identityAlignment
P32295 Indole-3-acetic acid-induced protein ARG72.6e-1955.81Show/hide
Query:  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIF
        MG  LP I   K    R   SS+  + PKG+LAVYVGE    KRF++PV++L+ P F  LLSQ+EEEFGYDHPMGGLT  C+E++F
Subjt:  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIF

P33080 Auxin-induced protein X10A8.9e-2056.98Show/hide
Query:  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIF
        MG  LP I   K  +     SS++ EVPKG+L VYVG  D+ +RFL+PV+YL+ PSF  LL+Q+EEEFGYDHPMGGLT  C E+ F
Subjt:  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIF

P33081 Auxin-induced protein 15A2.3e-2063.77Show/hide
Query:  IHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIF
        I ++S+ A+ PKG+LAVYVGE  + KRF++PV+YL+ PSF  LLSQ+EEEFGYDHPMGGLT  C+E++F
Subjt:  IHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIF

P33082 Auxin-induced protein X158.9e-2060.56Show/hide
Query:  IHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIFFR
        I ++S   + PKG+LAVYVGE  + KRF++PV+Y++ PSF  LL+Q+EEEFGYDHPMGGLT  C+EE+F R
Subjt:  IHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIFFR

Q9FJF9 Auxin-responsive protein SAUR212.0e-1959.74Show/hide
Query:  RRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIFFRHLAR
        ++I   S  +  PKG LAVYVGE+ QKKR+LVP++YLS PSF +LLS+SEEEFG+DHPMGGLT  C E+ F    +R
Subjt:  RRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIFFRHLAR

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family1.9e-2556.84Show/hide
Query:  MGISLPRIV-SSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIFFRHLARNS
        M I + R++ SSK  L+ +  SS    +PKGHLAVYVGE  QK+RF+VPV YLS+P F  LL ++EEEFG+DHPMGGLT  CTE+IF    +R S
Subjt:  MGISLPRIV-SSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIFFRHLARNS

AT4G34770.1 SAUR-like auxin-responsive protein family1.7e-2151.06Show/hide
Query:  MGISLPRIVSSKHFLRR--------IHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIF
        MGI L  +  +K  L+R        +  +S T  VPKGH+AVYVGET  +KRF++P++YL++P F  LL+ +EEEFG+DHPMGGLT  CTE+ F
Subjt:  MGISLPRIVSSKHFLRR--------IHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIF

AT4G34800.1 SAUR-like auxin-responsive protein family6.3e-2152.87Show/hide
Query:  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVG-ETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIF
        M I L R+++SK          + + VPKGH+AVYVG E + KKRF+VP++YL++PSF  LLS++EEEFG++HP+GGLT  C EE F
Subjt:  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVG-ETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIF

AT4G38840.1 SAUR-like auxin-responsive protein family2.6e-2257.61Show/hide
Query:  MGISLPRIV-SSKHFLRRI-----HQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIF
        M I +PR++ SSK  LR+        SS + +VPKG+LAVYVGE +  KRF+VPV+YL  PSF  LL ++EEEFG+DHPMGGLT  C+EEIF
Subjt:  MGISLPRIV-SSKHFLRRI-----HQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIF

AT5G18030.1 SAUR-like auxin-responsive protein family1.4e-2059.74Show/hide
Query:  RRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIFFRHLAR
        ++I   S  +  PKG LAVYVGE+ QKKR+LVP++YLS PSF +LLS+SEEEFG+DHPMGGLT  C E+ F    +R
Subjt:  RRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIFFRHLAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCATCTCTTTGCCAAGGATTGTGAGTTCAAAGCACTTTCTGAGGCGCATTCATCAGTCTTCGAGAACCGCAGAGGTCCCGAAGGGCCACTTGGCTGTGTATGTTGG
AGAGACTGATCAAAAGAAGAGATTTTTGGTCCCTGTTGCATATTTGAGCAACCCTTCATTCCATAGCTTGTTGAGTCAGTCTGAAGAAGAGTTTGGATATGATCATCCAA
TGGGTGGCCTTACATTCTCTTGTACAGAAGAGATTTTCTTCAGGCATTTGGCTAGAAACAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCATCTCTTTGCCAAGGATTGTGAGTTCAAAGCACTTTCTGAGGCGCATTCATCAGTCTTCGAGAACCGCAGAGGTCCCGAAGGGCCACTTGGCTGTGTATGTTGG
AGAGACTGATCAAAAGAAGAGATTTTTGGTCCCTGTTGCATATTTGAGCAACCCTTCATTCCATAGCTTGTTGAGTCAGTCTGAAGAAGAGTTTGGATATGATCATCCAA
TGGGTGGCCTTACATTCTCTTGTACAGAAGAGATTTTCTTCAGGCATTTGGCTAGAAACAGTTAG
Protein sequenceShow/hide protein sequence
MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIFFRHLARNS