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MS028273 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028273
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein NLP2-like
Genome locationscaffold47:1893066..1894143
RNA-Seq ExpressionMS028273
SyntenyMS028273
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AGR88904.1 nodule inception protein 1 [Datisca glomerata]3.8e-0666.67Show/hide
Query:  WWI----QPPPSFSVKERLKTAVGYLRECTKDRDVLVQLWAP
        WWI     P  S SVKERL  A+GYLRECTKDRDVL+Q+W P
Subjt:  WWI----QPPPSFSVKERLKTAVGYLRECTKDRDVLVQLWAP
PPD80439.1 hypothetical protein GOBAR_DD22625 [Gossypium barbadense]6.4e-0654.24Show/hide
Query:  WWIQPP----PSFSVKERLKTAVGYLRECTKDRDVLVQLWAPPT---KATANCGGQLYS
        WWI P      S SVKERL  A+GYL+E TKDRDVL+Q+W P T   K      GQ YS
Subjt:  WWIQPP----PSFSVKERLKTAVGYLRECTKDRDVLVQLWAPPT---KATANCGGQLYS
TYJ03522.1 hypothetical protein E1A91_A12G033800v1 [Gossypium mustelinum]6.4e-0654.24Show/hide
Query:  WWIQPP----PSFSVKERLKTAVGYLRECTKDRDVLVQLWAPPT---KATANCGGQLYS
        WWI P      S SVKERL  A+GYL+E TKDRDVL+Q+W P T   K      GQ YS
Subjt:  WWIQPP----PSFSVKERLKTAVGYLRECTKDRDVLVQLWAPPT---KATANCGGQLYS
XP_016734445.1 protein NLP2-like [Gossypium hirsutum]6.4e-0654.24Show/hide
Query:  WWIQPP----PSFSVKERLKTAVGYLRECTKDRDVLVQLWAPPT---KATANCGGQLYS
        WWI P      S SVKERL  A+GYL+E TKDRDVL+Q+W P T   K      GQ YS
Subjt:  WWIQPP----PSFSVKERLKTAVGYLRECTKDRDVLVQLWAPPT---KATANCGGQLYS
XP_017637609.1 PREDICTED: protein NLP2 isoform X2 [Gossypium arboreum]6.4e-0654.24Show/hide
Query:  WWIQPP----PSFSVKERLKTAVGYLRECTKDRDVLVQLWAPPT---KATANCGGQLYS
        WWI P      S SVKERL  A+GYL+E TKDRDVL+Q+W P T   K      GQ YS
Subjt:  WWIQPP----PSFSVKERLKTAVGYLRECTKDRDVLVQLWAPPT---KATANCGGQLYS
TrEMBL top hitse value%identityAlignment
A0A1U8LXS8 protein NLP2-like3.1e-0654.24Show/hide
Query:  WWIQPP----PSFSVKERLKTAVGYLRECTKDRDVLVQLWAPPT---KATANCGGQLYS
        WWI P      S SVKERL  A+GYL+E TKDRDVL+Q+W P T   K      GQ YS
Subjt:  WWIQPP----PSFSVKERLKTAVGYLRECTKDRDVLVQLWAPPT---KATANCGGQLYS
A0A1U8N5S8 protein NLP2-like3.1e-0654.24Show/hide
Query:  WWIQPP----PSFSVKERLKTAVGYLRECTKDRDVLVQLWAPPT---KATANCGGQLYS
        WWI P      S SVKERL  A+GYL+E TKDRDVL+Q+W P T   K      GQ YS
Subjt:  WWIQPP----PSFSVKERLKTAVGYLRECTKDRDVLVQLWAPPT---KATANCGGQLYS
A0A5D2A4K8 Uncharacterized protein3.1e-0654.24Show/hide
Query:  WWIQPP----PSFSVKERLKTAVGYLRECTKDRDVLVQLWAPPT---KATANCGGQLYS
        WWI P      S SVKERL  A+GYL+E TKDRDVL+Q+W P T   K      GQ YS
Subjt:  WWIQPP----PSFSVKERLKTAVGYLRECTKDRDVLVQLWAPPT---KATANCGGQLYS
A0A5D2E5Z0 Uncharacterized protein3.1e-0654.24Show/hide
Query:  WWIQPP----PSFSVKERLKTAVGYLRECTKDRDVLVQLWAPPT---KATANCGGQLYS
        WWI P      S SVKERL  A+GYL+E TKDRDVL+Q+W P T   K      GQ YS
Subjt:  WWIQPP----PSFSVKERLKTAVGYLRECTKDRDVLVQLWAPPT---KATANCGGQLYS
T1SBU4 Nodule inception protein 11.8e-0666.67Show/hide
Query:  WWI----QPPPSFSVKERLKTAVGYLRECTKDRDVLVQLWAP
        WWI     P  S SVKERL  A+GYLRECTKDRDVL+Q+W P
Subjt:  WWI----QPPPSFSVKERLKTAVGYLRECTKDRDVLVQLWAP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76350.1 Plant regulator RWP-RK family protein4.9e-0447.5Show/hide
Query:  WWIQPP--PSFSVKERLKTAVGYLRECTKDRDVLVQLWAP
        WWI P     FSV ERL  AV ++++ T +R  L+QLW P
Subjt:  WWIQPP--PSFSVKERLKTAVGYLRECTKDRDVLVQLWAP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGACTTTTCTTCACTGATGATCTCAAAACAACTTGATGATTTTATGCTTCTTTGTGGATTGTTTCTAAATGGGTATTATTCGAGATATAATTATGTATCAGTACG
GCCCATTTCCATCGAATACAACGTACGGAAGCATGCCGGAGACGGCGGCCAGCGGGGGCGTCAACTTCTCGCAACCAACGGCGGAGGAGCCGCCGCCGCCCAACAATGGC
TGCAACTTCCACTACCACCACCAAATCTTCCCAGTAGATCAAACCACCGCCGGCAGCGGCCGCAACAACTGCCACGAAATATTCCAGTCGGAATCCTTCGTCGTGGAAGG
AAACGAGATGAGCCGGCTTGGTGGATTCAGCCGCCGCCGTCCTTCTCCGTGAAGGAGCGGCTGAAGACCGCCGTCGGGTACTTGAGAGAATGCACGAAAGATCGCGACGT
TCTCGTCCAGCTGTGGGCCCCACCGACGAAAGCGACAGCTAACTGCGGTGGCCAGCTGTACTCTTTCGCCGAGTGGAACTCTCGGCGGAGGCCGCGAGTTGACTCAGTTG
CCGGAGAGAGGAGTATCCGCGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGACTTTTCTTCACTGATGATCTCAAAACAACTTGATGATTTTATGCTTCTTTGTGGATTGTTTCTAAATGGGTATTATTCGAGATATAATTATGTATCAGTACG
GCCCATTTCCATCGAATACAACGTACGGAAGCATGCCGGAGACGGCGGCCAGCGGGGGCGTCAACTTCTCGCAACCAACGGCGGAGGAGCCGCCGCCGCCCAACAATGGC
TGCAACTTCCACTACCACCACCAAATCTTCCCAGTAGATCAAACCACCGCCGGCAGCGGCCGCAACAACTGCCACGAAATATTCCAGTCGGAATCCTTCGTCGTGGAAGG
AAACGAGATGAGCCGGCTTGGTGGATTCAGCCGCCGCCGTCCTTCTCCGTGAAGGAGCGGCTGAAGACCGCCGTCGGGTACTTGAGAGAATGCACGAAAGATCGCGACGT
TCTCGTCCAGCTGTGGGCCCCACCGACGAAAGCGACAGCTAACTGCGGTGGCCAGCTGTACTCTTTCGCCGAGTGGAACTCTCGGCGGAGGCCGCGAGTTGACTCAGTTG
CCGGAGAGAGGAGTATCCGCGGTTGA
Protein sequenceShow/hide protein sequence
MEDFSSLMISKQLDDFMLLCGLFLNGYYSRYNYVSVRPISIEYNVRKHAGDGGQRGRQLLATNGGGAAAAQQWLQLPLPPPNLPSRSNHRRQRPQQLPRNIPVGILRRGR
KRDEPAWWIQPPPSFSVKERLKTAVGYLRECTKDRDVLVQLWAPPTKATANCGGQLYSFAEWNSRRRPRVDSVAGERSIRG