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MS028281 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028281
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionreceptor-like protein 12
Genome locationscaffold47:2389892..2390372
RNA-Seq ExpressionMS028281
SyntenyMS028281
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001611 - Leucine-rich repeat
IPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059199.1 receptor-like protein 12 [Cucumis melo var. makuwa]3.9e-1282.35Show/hide
Query:  LGGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSG
        L GRI  SLGNIT+LESLDLSN+KLSGEIPETLA LTFL+TF VSQN+LSG
Subjt:  LGGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSG

KAG6572227.1 Receptor-like protein 9DC3, partial [Cucurbita argyrosperma subsp. sororia]3.7e-1552.21Show/hide
Query:  MLGGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSG---------EVEASVFDFDWIWVWGGVWNAGWEL---CNQEERRMVSE
        ML G+IPSSLGNIT+LESLDLSNN+LSGEIPETLA LTFLSTFDVSQN LSG          +E+S ++       G V   G  L   C + E + +S 
Subjt:  MLGGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSG---------EVEASVFDFDWIWVWGGVWNAGWEL---CNQEERRMVSE

Query:  GFQSCTTKEEGDK
             +T EE D+
Subjt:  GFQSCTTKEEGDK

XP_022953006.1 receptor-like protein 12 [Cucurbita moschata]3.7e-1552.21Show/hide
Query:  MLGGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSG---------EVEASVFDFDWIWVWGGVWNAGWEL---CNQEERRMVSE
        ML G+IPSSLGNIT+LESLDLSNN+LSGEIPETLA LTFLSTFDVSQN LSG          +E+S ++       G V   G  L   C + E + +S 
Subjt:  MLGGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSG---------EVEASVFDFDWIWVWGGVWNAGWEL---CNQEERRMVSE

Query:  GFQSCTTKEEGDK
             +T EE D+
Subjt:  GFQSCTTKEEGDK

XP_022968886.1 receptor-like protein 12 [Cucurbita maxima]2.4e-1484.62Show/hide
Query:  MLGGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSG
        ML G+IPSSLGNIT+LESLDLSNN+LSGEIPE+LA LTFLSTFDV+QN LSG
Subjt:  MLGGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSG

XP_023511641.1 receptor-like protein 12 [Cucurbita pepo subsp. pepo]3.7e-1588.46Show/hide
Query:  MLGGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSG
        ML G+IPSSLGNIT+LESLDLSNN+LSGEIPETLA LTFLSTFDVSQN LSG
Subjt:  MLGGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSG

TrEMBL top hitse value%identityAlignment
A0A5A7V066 Receptor-like protein 121.9e-1282.35Show/hide
Query:  LGGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSG
        L GRI  SLGNIT+LESLDLSN+KLSGEIPETLA LTFL+TF VSQN+LSG
Subjt:  LGGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSG

A0A6J1GLT5 receptor-like protein 121.8e-1552.21Show/hide
Query:  MLGGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSG---------EVEASVFDFDWIWVWGGVWNAGWEL---CNQEERRMVSE
        ML G+IPSSLGNIT+LESLDLSNN+LSGEIPETLA LTFLSTFDVSQN LSG          +E+S ++       G V   G  L   C + E + +S 
Subjt:  MLGGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSG---------EVEASVFDFDWIWVWGGVWNAGWEL---CNQEERRMVSE

Query:  GFQSCTTKEEGDK
             +T EE D+
Subjt:  GFQSCTTKEEGDK

A0A6J1HW40 receptor-like protein 121.2e-1484.62Show/hide
Query:  MLGGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSG
        ML G+IPSSLGNIT+LESLDLSNN+LSGEIPE+LA LTFLSTFDV+QN LSG
Subjt:  MLGGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSG

A0A6P3ZLA0 receptor-like protein 77.1e-1264.06Show/hide
Query:  MLGGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSGEV----EASVFD
        +L G+IPS+LGNITELESLDLSNNKLSG+IP+ LA LTFLS F V+ N L+G +    + S FD
Subjt:  MLGGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSGEV----EASVFD

A0A6P4A5C6 receptor-like protein 347.1e-1264.06Show/hide
Query:  MLGGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSGEV----EASVFD
        +L G+IPS+LGNITELESLDLSNNKLSG+IP+ LA LTFLS F V+ N L+G +    + S FD
Subjt:  MLGGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSGEV----EASVFD

SwissProt top hitse value%identityAlignment
F4KHA2 Receptor-like protein 541.4e-0955.56Show/hide
Query:  GRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSGEVEAS
        GRIPSSL  + +LESLDLS N++SG IP+ L  LTFL   ++S NRL+G++  S
Subjt:  GRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSGEVEAS

O48851 Receptor like protein 221.7e-1060.78Show/hide
Query:  GRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSGEV
        G IP S  N+TELESLDLS NKLSGEIP+ L  L++L+  DVS N+L+G++
Subjt:  GRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSGEV

Q8LPB4 Phytosulfokine receptor 11.1e-0954.39Show/hide
Query:  LGGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSGEVEASV
        L G IP++L  +T LE LDLS+N LSG IP +L  L+FLSTF V+ N+LSG +   V
Subjt:  LGGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSGEVEASV

Q9SRL7 Receptor-like protein 356.4e-1059.62Show/hide
Query:  GGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSGEV
        GG IPSS+GN+T LESLD+S NKL+GEIP+ L  L+FL+  + S N+L+G V
Subjt:  GGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSGEV

Q9ZVR7 Phytosulfokine receptor 18.4e-1060.38Show/hide
Query:  LGGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSGEV
        L G IPSSL  +T LE+LDLSNN+LSG IP +L  L+FLS F V+ N LSG +
Subjt:  LGGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSGEV

Arabidopsis top hitse value%identityAlignment
AT2G02220.1 phytosulfokin receptor 15.9e-1160.38Show/hide
Query:  LGGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSGEV
        L G IPSSL  +T LE+LDLSNN+LSG IP +L  L+FLS F V+ N LSG +
Subjt:  LGGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSGEV

AT2G32660.1 receptor like protein 221.2e-1160.78Show/hide
Query:  GRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSGEV
        G IP S  N+TELESLDLS NKLSGEIP+ L  L++L+  DVS N+L+G++
Subjt:  GRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSGEV

AT3G05660.1 receptor like protein 331.3e-1058.82Show/hide
Query:  GRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSGEV
        G IPSS+GN+ ELESLD+S NKLSGEIP+ L  L++L+  + S N+L G+V
Subjt:  GRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSGEV

AT3G11080.1 receptor like protein 354.6e-1159.62Show/hide
Query:  GGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSGEV
        GG IPSS+GN+T LESLD+S NKL+GEIP+ L  L+FL+  + S N+L+G V
Subjt:  GGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSGEV

AT5G40170.1 receptor like protein 541.0e-1055.56Show/hide
Query:  GRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSGEVEAS
        GRIPSSL  + +LESLDLS N++SG IP+ L  LTFL   ++S NRL+G++  S
Subjt:  GRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSGEVEAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGGTGGTCGAATCCCGTCATCATTGGGGAACATAACGGAGCTTGAATCTTTGGATCTTTCGAACAACAAGCTTTCAGGGGAGATTCCAGAAACACTGGCATGGCT
CACTTTCCTTTCCACTTTTGATGTCTCTCAAAACAGGCTCTCTGGAGAAGTTGAAGCCTCTGTGTTTGATTTTGATTGGATATGGGTGTGGGGTGGTGTTTGGAATGCTG
GCTGGGAATTATGTAATCAAGAGGAAAGAAGAATGGTTTCTGAGGGTTTTCAGAGTTGCACGACCAAAGAGGAAGGAGATAAGAAGAACAAACCATTAAAAGAGTTGTTA
AAAGCTCTGGTTTCATCTAAGAGTGAATTCGAGATAGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCGGTGGTCGAATCCCGTCATCATTGGGGAACATAACGGAGCTTGAATCTTTGGATCTTTCGAACAACAAGCTTTCAGGGGAGATTCCAGAAACACTGGCATGGCT
CACTTTCCTTTCCACTTTTGATGTCTCTCAAAACAGGCTCTCTGGAGAAGTTGAAGCCTCTGTGTTTGATTTTGATTGGATATGGGTGTGGGGTGGTGTTTGGAATGCTG
GCTGGGAATTATGTAATCAAGAGGAAAGAAGAATGGTTTCTGAGGGTTTTCAGAGTTGCACGACCAAAGAGGAAGGAGATAAGAAGAACAAACCATTAAAAGAGTTGTTA
AAAGCTCTGGTTTCATCTAAGAGTGAATTCGAGATAGGGTGA
Protein sequenceShow/hide protein sequence
MLGGRIPSSLGNITELESLDLSNNKLSGEIPETLAWLTFLSTFDVSQNRLSGEVEASVFDFDWIWVWGGVWNAGWELCNQEERRMVSEGFQSCTTKEEGDKKNKPLKELL
KALVSSKSEFEIG