; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS028290 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028290
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionexopolygalacturonase-like
Genome locationscaffold47:2528954..2532733
RNA-Seq ExpressionMS028290
SyntenyMS028290
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR006626 - Parallel beta-helix repeat
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008441641.1 PREDICTED: exopolygalacturonase-like [Cucumis melo]2.9e-12480.87Show/hide
Query:  GRQKGGGHRKR-------SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQ
        G +K   H K+       +LK NF+TNS+VKDITSLDSKN+HINLLGCKN+TF HVTI+AP  SPNTDGIH+SSSE INILNTNI TGDDCISVGD+N Q
Subjt:  GRQKGGGHRKR-------SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQ

Query:  ITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISK
        I ISDVTCGPGHGISIGSLGKYSKEK+V+GV VKKCKLTSTTNGVRIKTWPDS G F ASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISK
Subjt:  ITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISK

Query:  VSFKNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPSTD
        VSFKNIRGTSATPVAVK+VCS SNPCE VEVADI+LTY+G +GPIKS+CANVKP I+G+QNP IC E AP + PSTD
Subjt:  VSFKNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPSTD

XP_022136075.1 exopolygalacturonase-like [Momordica charantia]2.5e-14494.58Show/hide
Query:  GRQKGGGHRKR-------SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQ
        G +K   H K+       SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQ
Subjt:  GRQKGGGHRKR-------SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQ

Query:  ITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISK
        ITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISK
Subjt:  ITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISK

Query:  VSFKNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPSTD
        VSFKNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICA+VAPPNAPSTD
Subjt:  VSFKNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPSTD

XP_022157826.1 exopolygalacturonase-like [Momordica charantia]6.4e-12484.94Show/hide
Query:  SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGS
        SLKFNFVTNS+VKDITSLDSKNFHIN+LGCKN+TFQHVTI+AP +SPNTDGIHI  SE INILNT I TGDDCISVGD+N QITISDVTCGPGHGI+IGS
Subjt:  SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGS

Query:  LGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL
        LGKY++E+ V GV +KKCKL  TTNGVRIKTWPDSAG+F ASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIK+SKVSFKNI+GTSATPVAVKL
Subjt:  LGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL

Query:  VCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPSTD
        VCS S PCEGVEVADI+LTY+G QGPI S+CANVKPTI+G+QNPKICAEVAP + PSTD
Subjt:  VCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPSTD

XP_031744814.1 exopolygalacturonase-like [Cucumis sativus]4.9e-12480.51Show/hide
Query:  GRQKGGGHRKR-------SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQ
        G  K   H+K+       +LKF+F+TNS+VKDITSLDSKNFHINLLGCKNVTFQHVTISAP++SPNTDGIHISSSE INIL++ I TGDDC+SVGDSN Q
Subjt:  GRQKGGGHRKR-------SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQ

Query:  ITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISK
        +TI++VTCGPGHGIS+GSLGKY+KEKDV+GV VK CKL +TTNGVRIKTWPDSAGAFIASDMHFEDIEM NVSNPVIIDQEYCPWNQCNRKVPSKIKISK
Subjt:  ITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISK

Query:  VSFKNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPSTD
        VSFKNIRGTSATP+AVKLVCS S PCEGVEVADINLTY+G +GPI SECANV+P ITG+Q+P+ICA+ AP  APSTD
Subjt:  VSFKNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPSTD

XP_031744817.1 exopolygalacturonase-like [Cucumis sativus]4.9e-12480.51Show/hide
Query:  GRQKGGGHRKR-------SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQ
        G  K   H+K+       +LKF+F+TNS+VKDITSLDSKNFHINLLGCKNVTFQHVTISAP++SPNTDGIHISSSE INIL++ I TGDDC+SVGDSN Q
Subjt:  GRQKGGGHRKR-------SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQ

Query:  ITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISK
        +TI++VTCGPGHGIS+GSLGKY+KEKDV+GV VK CKL +TTNGVRIKTWPDSAGAFIASDMHFEDIEM NVSNPVIIDQEYCPWNQCNRKVPSKIKISK
Subjt:  ITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISK

Query:  VSFKNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPSTD
        VSFKNIRGTSATP+AVKLVCS S PCEGVEVADINLTY+G +GPI SECANV+P ITG+Q+P+ICA+ AP  APSTD
Subjt:  VSFKNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPSTD

TrEMBL top hitse value%identityAlignment
A0A1S3B3X5 exopolygalacturonase-like1.4e-12480.87Show/hide
Query:  GRQKGGGHRKR-------SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQ
        G +K   H K+       +LK NF+TNS+VKDITSLDSKN+HINLLGCKN+TF HVTI+AP  SPNTDGIH+SSSE INILNTNI TGDDCISVGD+N Q
Subjt:  GRQKGGGHRKR-------SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQ

Query:  ITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISK
        I ISDVTCGPGHGISIGSLGKYSKEK+V+GV VKKCKLTSTTNGVRIKTWPDS G F ASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISK
Subjt:  ITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISK

Query:  VSFKNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPSTD
        VSFKNIRGTSATPVAVK+VCS SNPCE VEVADI+LTY+G +GPIKS+CANVKP I+G+QNP IC E AP + PSTD
Subjt:  VSFKNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPSTD

A0A5A7TRZ0 Exopolygalacturonase-like3.1e-12480.51Show/hide
Query:  GRQKGGGHRKR-------SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQ
        G +K   H K+       +LK NFVTNS+VKDITSLDSKN+HINLLGCKN+TF HVTI+AP +SPNTDGIH+SSSE INILNTNI TGDDCISVGD+N Q
Subjt:  GRQKGGGHRKR-------SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQ

Query:  ITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISK
        + ISDVTCGPGHGISIGSLGKYSKEK+V+GV VKKCKLT TTNGVRIKTWPDSA AF ASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKIS 
Subjt:  ITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISK

Query:  VSFKNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPSTD
        VSFKNIRGTSATPVAVK+VCS SNPCEGVEVADI+LTY+G +GPIKS+CANVKP I+G+QNP IC E AP   PS+D
Subjt:  VSFKNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPSTD

A0A5A7ULW5 Exopolygalacturonase-like1.4e-12480.87Show/hide
Query:  GRQKGGGHRKR-------SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQ
        G +K   H K+       +LK NF+TNS+VKDITSLDSKN+HINLLGCKN+TF HVTI+AP  SPNTDGIH+SSSE INILNTNI TGDDCISVGD+N Q
Subjt:  GRQKGGGHRKR-------SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQ

Query:  ITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISK
        I ISDVTCGPGHGISIGSLGKYSKEK+V+GV VKKCKLTSTTNGVRIKTWPDS G F ASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISK
Subjt:  ITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISK

Query:  VSFKNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPSTD
        VSFKNIRGTSATPVAVK+VCS SNPCE VEVADI+LTY+G +GPIKS+CANVKP I+G+QNP IC E AP + PSTD
Subjt:  VSFKNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPSTD

A0A5D3DYI3 Exopolygalacturonase-like3.1e-12480.51Show/hide
Query:  GRQKGGGHRKR-------SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQ
        G +K   H K+       +LK NFVTNS+VKDITSLDSKN+HINLLGCKN+TF HVTI+AP +SPNTDGIH+SSSE INILNTNI TGDDCISVGD+N Q
Subjt:  GRQKGGGHRKR-------SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQ

Query:  ITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISK
        + ISDVTCGPGHGISIGSLGKYSKEK+V+GV VKKCKLT TTNGVRIKTWPDSA AF ASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKIS 
Subjt:  ITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISK

Query:  VSFKNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPSTD
        VSFKNIRGTSATPVAVK+VCS SNPCEGVEVADI+LTY+G +GPIKS+CANVKP I+G+QNP IC E AP   PS+D
Subjt:  VSFKNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPSTD

A0A6J1C2U8 exopolygalacturonase-like1.2e-14494.58Show/hide
Query:  GRQKGGGHRKR-------SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQ
        G +K   H K+       SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQ
Subjt:  GRQKGGGHRKR-------SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQ

Query:  ITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISK
        ITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISK
Subjt:  ITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISK

Query:  VSFKNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPSTD
        VSFKNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICA+VAPPNAPSTD
Subjt:  VSFKNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPSTD

SwissProt top hitse value%identityAlignment
P24548 Exopolygalacturonase (Fragment)1.3e-8760.08Show/hide
Query:  SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGS
        +L+   VTNS+++D+T+LDSKNFH+N++GCKN+TF+   ISA + S NTDGIHI  S+ +NI+NT I TGDDCIS+GD +  I I+++TCGPGHGIS+GS
Subjt:  SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGS

Query:  LGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL
        LG+Y  E+ V+G++VK C +T + NGVRIKTWP S     AS+MHF+DI M +V  P++IDQ YCP+NQC  +VPS +K+SK+SFKNI+GTS T  AVKL
Subjt:  LGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL

Query:  VCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICA
        VCS S PC GVE+ADI+LTY+GK GP  S C N+KPTI G+Q P IC+
Subjt:  VCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICA

P35337 Polygalacturonase7.4e-8357.09Show/hide
Query:  SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGS
        S++F+FV N+ +KD+TSLD+KNFH N++  KN+TF ++ I AP  SPNTDGIH+   E + ILNT I TGDDCISVGD    + I  V CGPGHGIS+GS
Subjt:  SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGS

Query:  LGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL
        LG+Y  E+DV  + VK C L  T+NG+RIKTWP +A    A+ +HFEDI +  VSNP++IDQEYCPWNQCN+  PS IK+  ++F+NIRGTS    AVKL
Subjt:  LGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL

Query:  VCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKIC
        +CS  +PCE VE+ DIN+ Y G  GP   EC NV P + G QNPK C
Subjt:  VCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKIC

Q05967 Polygalacturonase8.4e-8759.76Show/hide
Query:  SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGS
        +L FN +TNS +KDIT+LDSK+FH+N+  CKN+TF    +SAP +SPNTDGIH+S S ++NI ++N  TGDDCISVGD   Q+ I+ VTCGPGHGIS+GS
Subjt:  SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGS

Query:  LGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL
        LG    EK V+GVFV+ C  T+T NGVRIKTWP S    + +D+HFEDI + NVSNPV+IDQ YCP+N+CN+ +PS++KISKVSF+NI+GTS T  AV L
Subjt:  LGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL

Query:  VCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVA
        + S   PCEG+EV DI++TY+GK+GP KS C N+KP++ G+QNP +C   A
Subjt:  VCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVA

Q39766 Polygalacturonase1.3e-8253.88Show/hide
Query:  SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGS
        +++F+FVTN++++DITS DSK FHIN+  CKN+T + + I APD SPNTDGIH+  SE +NI+ ++I TGDDCIS+GD    + I ++TCGPGHGISIGS
Subjt:  SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGS

Query:  LGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL
        LGK+  E+ V G+ +  C +T+T+NG RIKTWP   G  + S++HFEDI M NVS+P++IDQ+YCPWN+C +   SK+K+S +SFKNIRGTSA P A+K 
Subjt:  LGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL

Query:  VCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPST
        +CS S+PC+ VE+ADI++ +NG + P  S+C NVKP   G+ NP  C+   P    +T
Subjt:  VCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPST

Q40312 Polygalacturonase1.7e-8758.82Show/hide
Query:  FNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGSLGK
        FNFV NS+V+ +TS DSKNFH+ + GCKN+TF   TI+AP  SPNTDGIH+  S ++ ILNTNIGTGDDC+S+GD + QIT+  V CGPGHG+S+GSLGK
Subjt:  FNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGSLGK

Query:  YSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKLVCS
        ++ E++V G+ VK C LT+T NGVRIKTWPD+ G    SD+HFEDI M NV NPVIIDQEY PWNQC++K PSKIK+SK+SFKN++GTS T   V L+CS
Subjt:  YSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKLVCS

Query:  SSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPST
        S+ PC+GVE+ +++L +NG   P  ++C NVKP +TG     +C     P A +T
Subjt:  SSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPST

Arabidopsis top hitse value%identityAlignment
AT3G07820.1 Pectin lyase-like superfamily protein6.2e-8556.57Show/hide
Query:  SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGS
        S++F+F+ NS ++DI+S+D+KNFHIN+LG KN+T  ++ I AP+ SPNTDGIH+  S+ + ILN+ I TGDDCISVGD    + +  VTCGPGHGIS+GS
Subjt:  SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGS

Query:  LGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL
        LG+Y  E+DV G+ V  C L  T NG+RIKTWP +A +  ASD+HFEDI + +VSNP++IDQEYCPWNQCN++  S IK+  +SFKNIRGTS    AVKL
Subjt:  LGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL

Query:  VCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVA
        +CS   PC+ VE+ DI++ YNG  GP    C+NV P I G Q+PK C+  A
Subjt:  VCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVA

AT3G07830.1 Pectin lyase-like superfamily protein7.6e-8355.47Show/hide
Query:  SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGS
        S++F+FVTN+ ++DI+S+D+KNFHIN++G KN+TF +V I AP  SPNTDGIH+  S  ++I+N+ I TGDDC+SVGD    + + +V CGPGHGIS+GS
Subjt:  SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGS

Query:  LGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL
        LG+Y  E+DV G+ V  C L  T NG+RIKTWP +A +  AS++HFE+I + NVSNP++IDQEYCPWNQCN++  S IK++ +SF+ IRGTS    AVKL
Subjt:  LGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL

Query:  VCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKIC
        +CS   PCE V+V DIN+ Y G  GP    C+NV+P + G Q PK C
Subjt:  VCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKIC

AT3G07840.1 Pectin lyase-like superfamily protein6.2e-8556.92Show/hide
Query:  SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGS
        S++F+FV N+ ++DI+S+D+KNFHIN+LG KN+TF +V + AP  SPNTDGIH+  SE + ILN+ I TGDDCISVGD    + + +V CGPGHGIS+GS
Subjt:  SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGS

Query:  LGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL
        LG+Y  E+DV G+ V  C L  T NG+RIKTWP +A A  AS +HFE+I + NVSNP++IDQEYCPWNQCN++ PS IK+  +SFKNIRGTS    AVKL
Subjt:  LGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL

Query:  VCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPP
        +CS ++PC  VE+ +INL Y G  GP    C+NV P + G QNPK C+    P
Subjt:  VCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPP

AT3G14040.1 Pectin lyase-like superfamily protein4.3e-7854.55Show/hide
Query:  SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGS
        +++F  +TNS +  ITS +SK FH+N+L CKN+T   + I AP  S NTDGIHI  S  +N++   I TGDDC+S+GD    + + +V CGPGHGISIGS
Subjt:  SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGS

Query:  LGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL
        LG+Y  E+ V GV V+KC + +T NGVRIKTWP S    IAS++ FEDI M NVS PV+IDQEYCP+  C   VPSK+K+S V+ KNI+GTSAT VAVKL
Subjt:  LGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL

Query:  VCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPP
        +CS   PC  + ++DINL +NGK+GP  S C+N+KP ++G+  P  C EVA P
Subjt:  VCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPP

AT5G48140.1 Pectin lyase-like superfamily protein2.4e-8456.85Show/hide
Query:  SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGS
        S++F+FVT++ ++ ITSLD+K+FHIN++G KNVTF+ V I AP  SPNTDGIH+  S+ I I+N+ I TGDDC+SVGD    + +  VTCGPGHGISIGS
Subjt:  SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGS

Query:  LGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL
        LG+YS E++V G+ +  C L  T NG+RIKTWP +A    ASD+HFE+I + NVSNP++IDQEYCPWNQCN++ PS IK++ +SFK IRGTS    AVKL
Subjt:  LGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL

Query:  VCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICA
        +CS   PC+ VEV D+N+ Y G  GP   +C+NV P + G Q PK C+
Subjt:  VCSSSNPCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGGCGGACGGCAAAAAGGTGGTGGTCACCGTAAAAGGAGTTTGAAGTTCAATTTCGTCACTAATTCAGTAGTGAAGGACATAACTTCTTTGGATAGTAAGAATTT
CCATATCAATCTTTTGGGCTGCAAGAATGTTACCTTTCAACATGTGACAATTAGTGCACCAGACCATAGCCCCAATACCGATGGAATTCACATAAGTAGTTCAGAAAATA
TTAACATTCTCAATACAAATATAGGAACCGGGGACGATTGTATTTCTGTGGGAGATAGTAACTCACAAATAACTATCAGCGATGTGACTTGTGGACCAGGACATGGCATT
AGCATTGGAAGTTTGGGCAAGTACAGCAAGGAGAAAGATGTGATTGGAGTTTTTGTAAAAAAATGCAAATTAACTAGTACTACGAACGGTGTCAGGATCAAAACATGGCC
AGATTCTGCTGGTGCATTCATAGCCTCTGACATGCACTTCGAAGATATTGAAATGGTTAATGTTAGCAATCCTGTCATTATAGACCAAGAATATTGTCCATGGAACCAGT
GCAATCGAAAGGTTCCATCAAAAATTAAGATCAGCAAAGTCAGCTTTAAGAATATAAGAGGCACTTCTGCTACTCCGGTTGCAGTCAAACTTGTTTGCAGCTCAAGTAAT
CCATGTGAGGGTGTGGAAGTTGCTGATATTAACCTTACATACAATGGAAAACAAGGACCAATTAAGTCTGAGTGTGCAAATGTGAAACCTACCATTACCGGACAGCAAAA
TCCTAAAATTTGCGCTGAAGTTGCCCCTCCCAATGCTCCATCAACTGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATGGCGGACGGCAAAAAGGTGGTGGTCACCGTAAAAGGAGTTTGAAGTTCAATTTCGTCACTAATTCAGTAGTGAAGGACATAACTTCTTTGGATAGTAAGAATTT
CCATATCAATCTTTTGGGCTGCAAGAATGTTACCTTTCAACATGTGACAATTAGTGCACCAGACCATAGCCCCAATACCGATGGAATTCACATAAGTAGTTCAGAAAATA
TTAACATTCTCAATACAAATATAGGAACCGGGGACGATTGTATTTCTGTGGGAGATAGTAACTCACAAATAACTATCAGCGATGTGACTTGTGGACCAGGACATGGCATT
AGCATTGGAAGTTTGGGCAAGTACAGCAAGGAGAAAGATGTGATTGGAGTTTTTGTAAAAAAATGCAAATTAACTAGTACTACGAACGGTGTCAGGATCAAAACATGGCC
AGATTCTGCTGGTGCATTCATAGCCTCTGACATGCACTTCGAAGATATTGAAATGGTTAATGTTAGCAATCCTGTCATTATAGACCAAGAATATTGTCCATGGAACCAGT
GCAATCGAAAGGTTCCATCAAAAATTAAGATCAGCAAAGTCAGCTTTAAGAATATAAGAGGCACTTCTGCTACTCCGGTTGCAGTCAAACTTGTTTGCAGCTCAAGTAAT
CCATGTGAGGGTGTGGAAGTTGCTGATATTAACCTTACATACAATGGAAAACAAGGACCAATTAAGTCTGAGTGTGCAAATGTGAAACCTACCATTACCGGACAGCAAAA
TCCTAAAATTTGCGCTGAAGTTGCCCCTCCCAATGCTCCATCAACTGATTAA
Protein sequenceShow/hide protein sequence
MNGGRQKGGGHRKRSLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENINILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGI
SIGSLGKYSKEKDVIGVFVKKCKLTSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKLVCSSSN
PCEGVEVADINLTYNGKQGPIKSECANVKPTITGQQNPKICAEVAPPNAPSTD