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MS028292 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028292
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold47:2560478..2561060
RNA-Seq ExpressionMS028292
SyntenyMS028292
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572249.1 hypothetical protein SDJN03_28977, partial [Cucurbita argyrosperma subsp. sororia]1.8e-0447.86Show/hide
Query:  MATVETVSSNSVLSGETRDLKETDTKEEVEEKAADAVPKPEEEKQEEEESVEVVA--PNDEEV---EVAAKETEEEEVEEEEDEVVILS-------EDEA
        MATVET+S N+ L  ET  LKET  KE VEE A  AV   E+ ++EE   VE VA  P+ E     E      EEEEVEEEE+EVVIL+       E EA
Subjt:  MATVETVSSNSVLSGETRDLKETDTKEEVEEKAADAVPKPEEEKQEEEESVEVVA--PNDEEV---EVAAKETEEEEVEEEEDEVVILS-------EDEA

Query:  VEELVEEENGGSDESATMEIGTPEVEAEKE-EEAPANTAE
        V E+ +EE+   DES+  E   P  E E E +EAPA   E
Subjt:  VEELVEEENGGSDESATMEIGTPEVEAEKE-EEAPANTAE

XP_022136241.1 uncharacterized protein C53C9.2-like [Momordica charantia]1.4e-4495.28Show/hide
Query:  MATVETVSSNSVLSGETRDLKETDTKEEVEEKAADAVPKPEEEKQEEEESVEVVAPNDEEVEVAAKETEEEEVEEEEDEVVILSEDEAVEELVEEENGGS
        MAT ETVSSNSVLSGET DLK TDTKEEVEEKA DAVPKPEE +QEEEESVEVVAPNDEEVEVAAKETEEEEVEEEEDEVVILSEDEAVEELVEEENGGS
Subjt:  MATVETVSSNSVLSGETRDLKETDTKEEVEEKAADAVPKPEEEKQEEEESVEVVAPNDEEVEVAAKETEEEEVEEEEDEVVILSEDEAVEELVEEENGGS

Query:  DESATMEIGTPEVEAEKEEEAPANTAE
        DESATMEIGTPEVEAEKEEEAPANTAE
Subjt:  DESATMEIGTPEVEAEKEEEAPANTAE

TrEMBL top hitse value%identityAlignment
A0A6J1C2Z5 uncharacterized protein C53C9.2-like6.6e-4595.28Show/hide
Query:  MATVETVSSNSVLSGETRDLKETDTKEEVEEKAADAVPKPEEEKQEEEESVEVVAPNDEEVEVAAKETEEEEVEEEEDEVVILSEDEAVEELVEEENGGS
        MAT ETVSSNSVLSGET DLK TDTKEEVEEKA DAVPKPEE +QEEEESVEVVAPNDEEVEVAAKETEEEEVEEEEDEVVILSEDEAVEELVEEENGGS
Subjt:  MATVETVSSNSVLSGETRDLKETDTKEEVEEKAADAVPKPEEEKQEEEESVEVVAPNDEEVEVAAKETEEEEVEEEEDEVVILSEDEAVEELVEEENGGS

Query:  DESATMEIGTPEVEAEKEEEAPANTAE
        DESATMEIGTPEVEAEKEEEAPANTAE
Subjt:  DESATMEIGTPEVEAEKEEEAPANTAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCGTTGAGACTGTATCTTCCAACTCTGTTCTTTCGGGAGAAACACGTGATCTTAAAGAGACAGATACAAAAGAAGAAGTGGAGGAAAAAGCGGCGGACGCCGT
ACCAAAACCGGAAGAGGAAAAGCAGGAGGAAGAAGAGAGCGTTGAAGTTGTTGCTCCGAACGATGAAGAAGTTGAAGTTGCGGCCAAGGAGACTGAAGAGGAGGAAGTCG
AGGAAGAAGAAGATGAGGTTGTGATCCTGTCGGAGGACGAGGCGGTGGAGGAATTAGTCGAAGAAGAGAATGGTGGCTCAGACGAGTCAGCGACAATGGAGATCGGAACT
CCAGAGGTAGAGGCGGAGAAGGAAGAGGAAGCGCCAGCGAATACGGCGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACCGTTGAGACTGTATCTTCCAACTCTGTTCTTTCGGGAGAAACACGTGATCTTAAAGAGACAGATACAAAAGAAGAAGTGGAGGAAAAAGCGGCGGACGCCGT
ACCAAAACCGGAAGAGGAAAAGCAGGAGGAAGAAGAGAGCGTTGAAGTTGTTGCTCCGAACGATGAAGAAGTTGAAGTTGCGGCCAAGGAGACTGAAGAGGAGGAAGTCG
AGGAAGAAGAAGATGAGGTTGTGATCCTGTCGGAGGACGAGGCGGTGGAGGAATTAGTCGAAGAAGAGAATGGTGGCTCAGACGAGTCAGCGACAATGGAGATCGGAACT
CCAGAGGTAGAGGCGGAGAAGGAAGAGGAAGCGCCAGCGAATACGGCGGAATAA
Protein sequenceShow/hide protein sequence
MATVETVSSNSVLSGETRDLKETDTKEEVEEKAADAVPKPEEEKQEEEESVEVVAPNDEEVEVAAKETEEEEVEEEEDEVVILSEDEAVEELVEEENGGSDESATMEIGT
PEVEAEKEEEAPANTAE