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MS028293 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028293
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGlycine-rich protein
Genome locationscaffold47:2584004..2584425
RNA-Seq ExpressionMS028293
SyntenyMS028293
Gene Ontology termsNA
InterPro domainsIPR010800 - Glycine rich protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144531.1 glycine-rich protein [Cucumis sativus]2.6e-1455.24Show/hide
Query:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTNEVDDIKRRGFSGGRVRFGGGGHHGHSPCHQGCCHHHHSGCSRCCSFAGEA--VDAEPQ
        MSSK FILLGLLFA+  L SS+ +T TARD K  +EATM+T EVD+++R  + G   R      HG   C++GCC      C RCCSFAGEA  VD +PQ
Subjt:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTNEVDDIKRRGFSGGRVRFGGGGHHGHSPCHQGCCHHHHSGCSRCCSFAGEA--VDAEPQ

Query:  AKPNN
        AKPNN
Subjt:  AKPNN

XP_022136254.1 glycine-rich protein 3 short isoform-like [Momordica charantia]1.6e-1449.23Show/hide
Query:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTNEVDDIKRR-----------GFSGGRVRFGGG--GHHGH--------------SPCHQG
        M+SK FILLGLLFA+  LLSS     TARDLK   E  M+T+ V+D K R           G+  G  R+GGG  GH GH                CH G
Subjt:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTNEVDDIKRR-----------GFSGGRVRFGGG--GHHGH--------------SPCHQG

Query:  CCHHHHSGCSRCCSFAGEAVDAEPQAKPNN
        CC +H S C RCCS+AGEAVD EPQAKP+N
Subjt:  CCHHHHSGCSRCCSFAGEAVDAEPQAKPNN

XP_038888333.1 glycine-rich protein-like isoform X1 [Benincasa hispida]3.6e-1960.19Show/hide
Query:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTNEVDDIKRRGFSGGRVRFGGGGHHGHSPCHQGCCHHHHSGCSRCCSFAGEAVDAEPQAK
        MSSK FI LGLLFA+  L SS+EVT  ARD+K  EEA M+T EVDD++R GF GG  R      HG   C+ GCC      C RCCSFAGEAVD +PQAK
Subjt:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTNEVDDIKRRGFSGGRVRFGGGGHHGHSPCHQGCCHHHHSGCSRCCSFAGEAVDAEPQAK

Query:  PNN
        PNN
Subjt:  PNN

XP_038888334.1 glycine-rich protein-like isoform X2 [Benincasa hispida]1.8e-1859.22Show/hide
Query:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTNEVDDIKRRGFSGGRVRFGGGGHHGHSPCHQGCCHHHHSGCSRCCSFAGEAVDAEPQAK
        MSSK FI LGLLFA+  L SS+EVT  ARD+K   EA M+T EVDD++R GF GG  R      HG   C+ GCC      C RCCSFAGEAVD +PQAK
Subjt:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTNEVDDIKRRGFSGGRVRFGGGGHHGHSPCHQGCCHHHHSGCSRCCSFAGEAVDAEPQAK

Query:  PNN
        PNN
Subjt:  PNN

XP_038888674.1 glycine-rich protein-like [Benincasa hispida]6.1e-1962Show/hide
Query:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTN--EVDDIKRRGFSGGRVRFGGGGHHGHSPCHQGCCHHHH-SGCSRCCSFAGEAVDAEP
        MSSK FI LG LF +  LLSS+EVTA A DLKS E+A M+TN    +D+KRR            GHHGH  CH GCC HHH  GCSRCCSFAGEAVDAEP
Subjt:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTN--EVDDIKRRGFSGGRVRFGGGGHHGHSPCHQGCCHHHH-SGCSRCCSFAGEAVDAEP

TrEMBL top hitse value%identityAlignment
A0A0A0K5A1 Uncharacterized protein1.3e-1455.24Show/hide
Query:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTNEVDDIKRRGFSGGRVRFGGGGHHGHSPCHQGCCHHHHSGCSRCCSFAGEA--VDAEPQ
        MSSK FILLGLLFA+  L SS+ +T TARD K  +EATM+T EVD+++R  + G   R      HG   C++GCC      C RCCSFAGEA  VD +PQ
Subjt:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTNEVDDIKRRGFSGGRVRFGGGGHHGHSPCHQGCCHHHHSGCSRCCSFAGEA--VDAEPQ

Query:  AKPNN
        AKPNN
Subjt:  AKPNN

A0A6J1C3T3 glycine-rich protein 3 short isoform-like7.5e-1549.23Show/hide
Query:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTNEVDDIKRR-----------GFSGGRVRFGGG--GHHGH--------------SPCHQG
        M+SK FILLGLLFA+  LLSS     TARDLK   E  M+T+ V+D K R           G+  G  R+GGG  GH GH                CH G
Subjt:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTNEVDDIKRR-----------GFSGGRVRFGGG--GHHGH--------------SPCHQG

Query:  CCHHHHSGCSRCCSFAGEAVDAEPQAKPNN
        CC +H S C RCCS+AGEAVD EPQAKP+N
Subjt:  CCHHHHSGCSRCCSFAGEAVDAEPQAKPNN

A0A6J1ESD5 glycine-rich protein DC7.1-like1.7e-1152.38Show/hide
Query:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTN--EVDDIKRRGFSGGRVRFGGGGHHGHSPCHQGCCHHHHSGCSRCCSFAGEAVDAEPQ
        M+SK FI+LGLLF +  LLSS+E +ATAR LKS EEA M+TN   ++D KRR          GGGHHGH   H+   H H   C   CS A E V+ +PQ
Subjt:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTN--EVDDIKRRGFSGGRVRFGGGGHHGHSPCHQGCCHHHHSGCSRCCSFAGEAVDAEPQ

Query:  AKPNN
        AKPNN
Subjt:  AKPNN

A0A6J1JMI7 glycine-rich protein DC7.1-like4.9e-1455.24Show/hide
Query:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTN--EVDDIKRRGFSGGRVRFGGGGHHGHSPCHQGCCHHHHSGCSRCCSFAGEAVDAEPQ
        M+SK FI+LGLLFA+  LLSS+E TATAR LKS EEA M+TN   ++D KRR          GGGHHGH   H+    HHH  C   CS A E V+ +PQ
Subjt:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTN--EVDDIKRRGFSGGRVRFGGGGHHGHSPCHQGCCHHHHSGCSRCCSFAGEAVDAEPQ

Query:  AKPNN
        AKPNN
Subjt:  AKPNN

W9RMN0 Uncharacterized protein5.0e-1143.41Show/hide
Query:  MSSKPFILLGLLFALFFLLSS----KEVTATARDLKSTEEATMKTNEVDDIKRRGFSG-------GRVRFGGGGHHGHS------------PCHQGCC--
        M+SK F LLGLLFA+  ++SS    K+V  T+ D  + + A  K N V D K  G+ G       G  R GGGGH G+              C+ GCC  
Subjt:  MSSKPFILLGLLFALFFLLSS----KEVTATARDLKSTEEATMKTNEVDDIKRRGFSG-------GRVRFGGGGHHGHS------------PCHQGCC--

Query:  HHHHSGCSRCCSFAGEAVDAE-PQAKPNN
        +++  GCSRCCS+AGEAVD E   AKPNN
Subjt:  HHHHSGCSRCCSFAGEAVDAE-PQAKPNN

SwissProt top hitse value%identityAlignment
P23137 Glycine-rich protein7.0e-1039.09Show/hide
Query:  MSSKPFILLGLLFALFFLLSSK----EVTATARDLKSTEEATMKTN---EVDDIKRRGFSGGRVRFGGGGHHGHSPCHQGCCHHHHSGCSRCCSFAGEAV
        M SK F+ LGL  A FFL+SS+    E+  T+  +K   E  +  +     +D+   G+ GG    GGGG+     C  GCC   ++GC RCCS+AGEA+
Subjt:  MSSKPFILLGLLFALFFLLSSK----EVTATARDLKSTEEATMKTN---EVDDIKRRGFSGGRVRFGGGGHHGHSPCHQGCCHHHHSGCSRCCSFAGEAV

Query:  DAEPQAKPNN
        D   +A+P+N
Subjt:  DAEPQAKPNN

Q9SL15 Glycine-rich protein 32.8e-0656.52Show/hide
Query:  FSGGRVRFGGGGHHGHSPCHQGCCHHHHSGCSRCCSFAGEAVDAEP
        + GG  R GGGG  G S C  GCC+  ++GCSRCCS+AGEAV  +P
Subjt:  FSGGRVRFGGGGHHGHSPCHQGCCHHHHSGCSRCCSFAGEAVDAEP

Q9ZSJ6 Glycine-rich protein 3 short isoform1.2e-0637.82Show/hide
Query:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTNEVDDIKRRGFSGGRVRFGGGGHHGH-----------------------SPCHQGCCHH
        M+SK  +LLG LFA  F++S     A A  +KS  E T+K  +       G +GG    GGGGH GH                       S C  GCC+ 
Subjt:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTNEVDDIKRRGFSGGRVRFGGGGHHGH-----------------------SPCHQGCCHH

Query:  HHSGCSRCCSFAGEAVDAE
         + GCSRCCS+AGEAV  +
Subjt:  HHSGCSRCCSFAGEAVDAE

Arabidopsis top hitse value%identityAlignment
AT2G05380.1 glycine-rich protein 3 short isoform8.8e-0837.82Show/hide
Query:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTNEVDDIKRRGFSGGRVRFGGGGHHGH-----------------------SPCHQGCCHH
        M+SK  +LLG LFA  F++S     A A  +KS  E T+K  +       G +GG    GGGGH GH                       S C  GCC+ 
Subjt:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTNEVDDIKRRGFSGGRVRFGGGGHHGH-----------------------SPCHQGCCHH

Query:  HHSGCSRCCSFAGEAVDAE
         + GCSRCCS+AGEAV  +
Subjt:  HHSGCSRCCSFAGEAVDAE

AT2G05380.2 glycine-rich protein 3 short isoform1.0e-0841.75Show/hide
Query:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTNE----VDDIKRRGFSGGRVRFGGGGHH---GHSPCHQGCCHHHHSGCSRCCSFAGEAV
        M+SK  +LLG LFA  F++S     A A  +KS  E T+K  +      D     + GG  R+ GGG     G S C  GCC+  + GCSRCCS+AGEAV
Subjt:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTNE----VDDIKRRGFSGGRVRFGGGGHH---GHSPCHQGCCHHHHSGCSRCCSFAGEAV

Query:  DAE
          +
Subjt:  DAE

AT2G05520.5 glycine-rich protein 33.0e-0836.94Show/hide
Query:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTNE---VDDIKRRGFSGGRVRFG-----------GGGHHGHSPCHQGCCHHHHSGCSRCC
        M+SK  +LLGL   L  L+ S+   A++  + S  + T+K ++    D+       GGR + G           GGG  G S C  GCC+  ++GCSRCC
Subjt:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTNE---VDDIKRRGFSGGRVRFG-----------GGGHHGHSPCHQGCCHHHHSGCSRCC

Query:  SFAGEAVDAEP
        S+AGEAV  +P
Subjt:  SFAGEAVDAEP

AT2G05520.6 glycine-rich protein 32.6e-0734.15Show/hide
Query:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTNEVDDIKRRGF----------------------SGGRVRFG----GGGHHGHSPCHQGC
        M+SK  +LLGL   L  L+ S+   A++  + S  + T+K ++      RG+                       GGR + G    GGG  G S C  GC
Subjt:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTNEVDDIKRRGF----------------------SGGRVRFG----GGGHHGHSPCHQGC

Query:  CHHHHSGCSRCCSFAGEAVDAEP
        C+  ++GCSRCCS+AGEAV  +P
Subjt:  CHHHHSGCSRCCSFAGEAVDAEP

AT2G05530.1 Glycine-rich protein family1.4e-0837.07Show/hide
Query:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTNEVDDIK--RRGFSGGRVRFGGGGHHG-----------------HSPCHQGCCHHHHSG
        M+SK  +L G LFA+  LL   EV A +  +KS    T++ ++ +       G++GG    GGGGH+G                 H  C  GCC+  + G
Subjt:  MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTNEVDDIK--RRGFSGGRVRFGGGGHHG-----------------HSPCHQGCCHHHHSG

Query:  CSRCCSFAGEAVDAEP
        CSRCCS+AGEAV  +P
Subjt:  CSRCCSFAGEAVDAEP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCCAAGCCTTTCATCTTGCTTGGTCTCCTTTTCGCCCTCTTCTTCCTCCTCTCCTCGAAGGAGGTTACCGCTACAGCAAGAGACTTAAAAAGCACAGAAGAAGC
CACGATGAAAACCAATGAAGTTGACGATATCAAACGCCGTGGTTTCAGCGGAGGCCGAGTTCGTTTCGGTGGCGGAGGCCACCATGGGCACAGCCCTTGCCACCAAGGTT
GCTGTCACCACCACCACAGCGGTTGCAGCCGGTGCTGCAGCTTCGCTGGTGAGGCTGTTGATGCAGAACCCCAAGCCAAGCCTAACAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCCAAGCCTTTCATCTTGCTTGGTCTCCTTTTCGCCCTCTTCTTCCTCCTCTCCTCGAAGGAGGTTACCGCTACAGCAAGAGACTTAAAAAGCACAGAAGAAGC
CACGATGAAAACCAATGAAGTTGACGATATCAAACGCCGTGGTTTCAGCGGAGGCCGAGTTCGTTTCGGTGGCGGAGGCCACCATGGGCACAGCCCTTGCCACCAAGGTT
GCTGTCACCACCACCACAGCGGTTGCAGCCGGTGCTGCAGCTTCGCTGGTGAGGCTGTTGATGCAGAACCCCAAGCCAAGCCTAACAACTGA
Protein sequenceShow/hide protein sequence
MSSKPFILLGLLFALFFLLSSKEVTATARDLKSTEEATMKTNEVDDIKRRGFSGGRVRFGGGGHHGHSPCHQGCCHHHHSGCSRCCSFAGEAVDAEPQAKPNN