; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS028310 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028310
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGeranylgeranyl transferase type-2 subunit beta
Genome locationscaffold47:3154573..3157141
RNA-Seq ExpressionMS028310
SyntenyMS028310
Gene Ontology termsGO:0018344 - protein geranylgeranylation (biological process)
GO:0005968 - Rab-protein geranylgeranyltransferase complex (cellular component)
GO:0004663 - Rab geranylgeranyltransferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001330 - PFTB repeat
IPR008930 - Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
IPR026873 - Geranylgeranyl transferase type-2 subunit beta
IPR045089 - Prenyltransferase subunit beta


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022135990.1 geranylgeranyl transferase type-2 subunit beta 1-like [Momordica charantia]2.4e-16799.65Show/hide
Query:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF
        RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF
Subjt:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF

Query:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV
        SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV
Subjt:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV

Query:  LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKIFLGKK
        LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAID AYALPVDVVNKIFLGKK
Subjt:  LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKIFLGKK

XP_022153059.1 geranylgeranyl transferase type-2 subunit beta 1-like isoform X1 [Momordica charantia]1.0e-16585.94Show/hide
Query:  RWGNWQLRNMLNTSYLLK-------------------RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALF
        +WGNWQLR+ML+TSYLLK                   RMNGAYWGLT LDILGKLNTVDVDEVVSWV+ CQH+SGGF+GNI HDPHILYTLSAVQVLALF
Subjt:  RWGNWQLRNMLNTSYLLK-------------------RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALF

Query:  DRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRFSYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLH
        D+L VLDVDKVTNY+ GLQNEDGSFSGDIWGEVDSRFSYIAI CLSLLHQL+KINVEKAV+++ SCKNMDGGFGCTPGGESHSGQIFCCVGALA+TGSLH
Subjt:  DRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRFSYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLH

Query:  HIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKA
        HID+DLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWI+KEKL++FILDCQDTENGGISDRPDDAVDVYHTYFG+AGLSLLEYPGLKA
Subjt:  HIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKA

Query:  IDPAYALPVDVVNKIFLGKK
        IDPAYALPVDVVN+IFLGKK
Subjt:  IDPAYALPVDVVNKIFLGKK

XP_038887307.1 geranylgeranyl transferase type-2 subunit beta 1-like isoform X1 [Benincasa hispida]2.2e-16093.64Show/hide
Query:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF
        RMNGAYWGLT LDILGKL+TVD++EVVSWVLKCQH+SGGFSGNIGHDPHILYTLSAVQVLALFD+LSV+DVDKVT+YI GLQNEDGSFSGDIWGEVDSRF
Subjt:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF

Query:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV
        SYIA+SCLSLL+QLEKINVEKAVNYI SCKNMDGGFGCTPGGESHSGQIFCCVGALAI GSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV
Subjt:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV

Query:  LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKIFLGKK
        LSSLIMI RVHWI+KEKL+KFILDCQDTENGGISDRPDDAVDVYHTYFG+AGLSLLEYPGLKAIDPAYALPVDVVN+IFLGKK
Subjt:  LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKIFLGKK

XP_038887310.1 geranylgeranyl transferase type-2 subunit beta 1-like isoform X2 [Benincasa hispida]2.2e-16093.64Show/hide
Query:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF
        RMNGAYWGLT LDILGKL+TVD++EVVSWVLKCQH+SGGFSGNIGHDPHILYTLSAVQVLALFD+LSV+DVDKVT+YI GLQNEDGSFSGDIWGEVDSRF
Subjt:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF

Query:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV
        SYIA+SCLSLL+QLEKINVEKAVNYI SCKNMDGGFGCTPGGESHSGQIFCCVGALAI GSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV
Subjt:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV

Query:  LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKIFLGKK
        LSSLIMI RVHWI+KEKL+KFILDCQDTENGGISDRPDDAVDVYHTYFG+AGLSLLEYPGLKAIDPAYALPVDVVN+IFLGKK
Subjt:  LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKIFLGKK

XP_038898588.1 geranylgeranyl transferase type-2 subunit beta 1-like isoform X2 [Benincasa hispida]4.2e-15992.23Show/hide
Query:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF
        RMNGAYWGLTALDILGKLNTVDVDEVVSWV+ CQH+SGGF+GN+GHDPHILYTLSAVQVLALFD+L VLDVDKVTNY+  LQNEDGSFSGDIWGEVDSRF
Subjt:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF

Query:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV
        SYIAI CLSLLHQL+KINVEKAVN+I SCKNMDGGFGCTPGGESHSGQIFCCVGALA+TGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV
Subjt:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV

Query:  LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKIFLGKK
        LSSLIMIDRVHWI+KEKL+KFILDCQDTENGGISDRPDDAVDVYHTYFG+AGLSLLEYP LKAIDPAYALPVDVVN+I LGK+
Subjt:  LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKIFLGKK

TrEMBL top hitse value%identityAlignment
A0A1S3CDW8 Geranylgeranyl transferase type-2 subunit beta1.0e-15891.17Show/hide
Query:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF
        RMNGAYWGLTALDILGKLN VD DEVVSWV+ CQH+SGGF+GN+GHDPHILYTLSAVQVLALFD+L VLDVDKVTNY+ GLQNEDGSFSGDIWGEVDSRF
Subjt:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF

Query:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV
        SYIAI CLSLLHQL+KINVEKAVN++ SCKNMDGGFGCTPGGESHSGQIFCCVGALA+TGSLHH+DKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV
Subjt:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV

Query:  LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKIFLGKK
        LSSLIMIDRVHWI+KEKL+KFILDCQDTENGGISDRPDDAVDVYHTYFG+AGLSLLEYP LKAIDPAYALPVDVVN+I LGK+
Subjt:  LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKIFLGKK

A0A5A7UX72 Geranylgeranyl transferase type-2 subunit beta1.0e-15891.17Show/hide
Query:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF
        RMNGAYWGLTALDILGKLN VD DEVVSWV+ CQH+SGGF+GN+GHDPHILYTLSAVQVLALFD+L VLDVDKVTNY+ GLQNEDGSFSGDIWGEVDSRF
Subjt:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF

Query:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV
        SYIAI CLSLLHQL+KINVEKAVN++ SCKNMDGGFGCTPGGESHSGQIFCCVGALA+TGSLHH+DKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV
Subjt:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV

Query:  LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKIFLGKK
        LSSLIMIDRVHWI+KEKL+KFILDCQDTENGGISDRPDDAVDVYHTYFG+AGLSLLEYP LKAIDPAYALPVDVVN+I LGK+
Subjt:  LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKIFLGKK

A0A6J1C294 Geranylgeranyl transferase type-2 subunit beta1.2e-16799.65Show/hide
Query:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF
        RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF
Subjt:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF

Query:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV
        SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV
Subjt:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV

Query:  LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKIFLGKK
        LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAID AYALPVDVVNKIFLGKK
Subjt:  LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKIFLGKK

A0A6J1DHW7 Geranylgeranyl transferase type-2 subunit beta5.0e-16685.94Show/hide
Query:  RWGNWQLRNMLNTSYLLK-------------------RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALF
        +WGNWQLR+ML+TSYLLK                   RMNGAYWGLT LDILGKLNTVDVDEVVSWV+ CQH+SGGF+GNI HDPHILYTLSAVQVLALF
Subjt:  RWGNWQLRNMLNTSYLLK-------------------RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALF

Query:  DRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRFSYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLH
        D+L VLDVDKVTNY+ GLQNEDGSFSGDIWGEVDSRFSYIAI CLSLLHQL+KINVEKAV+++ SCKNMDGGFGCTPGGESHSGQIFCCVGALA+TGSLH
Subjt:  DRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRFSYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLH

Query:  HIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKA
        HID+DLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWI+KEKL++FILDCQDTENGGISDRPDDAVDVYHTYFG+AGLSLLEYPGLKA
Subjt:  HIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKA

Query:  IDPAYALPVDVVNKIFLGKK
        IDPAYALPVDVVN+IFLGKK
Subjt:  IDPAYALPVDVVNKIFLGKK

A0A6J1DJK5 Geranylgeranyl transferase type-2 subunit beta2.0e-15991.87Show/hide
Query:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF
        RMNGAYWGLT LDILGKLNTVDVDEVVSWV+ CQH+SGGF+GNI HDPHILYTLSAVQVLALFD+L VLDVDKVTNY+ GLQNEDGSFSGDIWGEVDSRF
Subjt:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF

Query:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV
        SYIAI CLSLLHQL+KINVEKAV+++ SCKNMDGGFGCTPGGESHSGQIFCCVGALA+TGSLHHID+DLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV
Subjt:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV

Query:  LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKIFLGKK
        LSSLIMIDRVHWI+KEKL++FILDCQDTENGGISDRPDDAVDVYHTYFG+AGLSLLEYPGLKAIDPAYALPVDVVN+IFLGKK
Subjt:  LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKIFLGKK

SwissProt top hitse value%identityAlignment
P53611 Geranylgeranyl transferase type-2 subunit beta2.0e-11160.43Show/hide
Query:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF
        RM+G YWGLT +D++G+L+ ++ +E+++++  CQH+ GG S +IGHDPH+LYTLSAVQ+L L+D ++V+DV+KV  Y+ GLQ EDGSF+GDIWGE+D+RF
Subjt:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF

Query:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV
        S+ A++ L+LL +L+ INVEKA+ ++ SC N DGGFGC PG ESH+GQI+CC G LAIT  LH ++ DLLGWWLCERQ+ SGGLNGRPEKLPDVCYSWWV
Subjt:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV

Query:  LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKI
        L+SL +I R+HWID+EKL  FIL CQD E GG +DRP D VD +HT FG+AGLSLL    +K ++P + +P +V+ ++
Subjt:  LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKI

Q08603 Geranylgeranyl transferase type-2 subunit beta6.4e-11060.07Show/hide
Query:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF
        RM+G YWGLT +D++G+L+ ++ +E++ ++  CQH+ GG S +IGHDPH+LYTLSAVQ+L L+D + V++VDKV  Y+  LQ EDGSF+GDIWGE+D+RF
Subjt:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF

Query:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV
        S+ A++ L+LL +L+ INVEKA+ ++ SC N DGGFGC PG ESH+GQI+CC G LAIT  LH ++ DLLGWWLCERQ+ SGGLNGRPEKLPDVCYSWWV
Subjt:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV

Query:  LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKI
        L+SL +I R+HWID+EKL  FIL CQD E GG +DRP D VD +HT FG+AGLSLL    +K + P + +P +V+ ++
Subjt:  LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKI

Q5E9B3 Geranylgeranyl transferase type-2 subunit beta1.7e-11059.71Show/hide
Query:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF
        RM+G YWGLT +D++G+L+ ++ +E+++++  CQH+ GG S +IGHDPH+LYTLSAVQ+L L+D ++V+D++KV  Y+  LQ EDGSF+GDIWGE+D+RF
Subjt:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF

Query:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV
        S+ A++ L+LL +L+ INVEKA+ ++ SC N DGGFGC PG ESH+GQI+CC G LAIT  LH ++ DLLGWWLCERQ+ SGGLNGRPEKLPDVCYSWWV
Subjt:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV

Query:  LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKI
        L+SL +I R+HWID+EKL  FIL CQD E GG +DRP D VD +HT FG+AGLSLL    +K + P + +P +V+ ++
Subjt:  LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKI

Q84J75 Geranylgeranyl transferase type-2 subunit beta 15.2e-14480.14Show/hide
Query:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF
        RMNGAYWGLT LD+L KL  V  +EV+SW++ CQH+SGGF+GN GHDPHILYTLSAVQ+LALFD++++LD+ KV++Y+A LQNEDGSFSGD+WGE+D+RF
Subjt:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF

Query:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV
        SYIAI CLS+L  L+KINVEKAV YI SCKN+DGGFGCTPG ESH+GQIFCCVGALAITGSLHH+DKD LGWWLCERQ+K+GGLNGRPEKL DVCYSWWV
Subjt:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV

Query:  LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKIFLGK
        LSSLIMIDRVHWIDK KLVKFILDCQD +NGGISDRP+DAVD++HTYFGVAGLSLLEYPG+K IDPAYALPVDVVN+I   K
Subjt:  LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKIFLGK

Q9LHL5 Geranylgeranyl transferase type-2 subunit beta 22.0e-14079.86Show/hide
Query:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF
        RMNGAYWGLT L +L KL +V  DEVVSWV+ CQH+SGGF+GN GHDPH+LYTLSAVQ+LALFD+L++LDV+KV+NYIAGLQNEDGSFSGDIWGEVD+RF
Subjt:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF

Query:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQ-VKSGGLNGRPEKLPDVCYSWW
        SYIAI CLS+L  L+KINV+KAV+YI SCKN+DGGFGC+PG ESH+GQIFCCVGALAITG+LH +DKDLLGWWLCERQ  +SGGLNGRPEKLPDVCYSWW
Subjt:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQ-VKSGGLNGRPEKLPDVCYSWW

Query:  VLSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKIFLGK
        VLSSLIMIDRVHWI+K KLVKFILD QD +NGGISDRP   VD++HTYFGVAGLSLLEYPG+K IDPAYALPV V+N+I   K
Subjt:  VLSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKIFLGK

Arabidopsis top hitse value%identityAlignment
AT2G39550.1 Prenyltransferase family protein1.3e-4133.44Show/hide
Query:  LKRMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQH--------QSGGFSGNIG----------------HDPHILYTLSAVQVLALFDR-LSVLDVDK
        + R+  A++ ++ L  LG  + VD D V  WVL  Q         + G F G  G                +  H+  T  A+ +L +    LS +D   
Subjt:  LKRMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQH--------QSGGFSGNIG----------------HDPHILYTLSAVQVLALFDR-LSVLDVDK

Query:  VTNYIAGLQNEDGSFSG-DIWGEVDSRFSYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITG-----------S
        +   +  LQ +DGSF    I GE D RF Y A +   +L     ++ E A NYI +C++ DGGFG  PG ESH G  +C + +L + G           S
Subjt:  VTNYIAGLQNEDGSFSG-DIWGEVDSRFSYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITG-----------S

Query:  LHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGL
           ID  LL  W  +RQ   GG  GR  K  D CY++W+ + L +I     IDK  L KF++ CQ ++ GG S  P    D+YH+Y+G    SLLE  GL
Subjt:  LHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGL

Query:  KAIDPAYALPV
          + P   LP+
Subjt:  KAIDPAYALPV

AT3G12070.1 RAB geranylgeranyl transferase beta subunit 21.4e-14179.86Show/hide
Query:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF
        RMNGAYWGLT L +L KL +V  DEVVSWV+ CQH+SGGF+GN GHDPH+LYTLSAVQ+LALFD+L++LDV+KV+NYIAGLQNEDGSFSGDIWGEVD+RF
Subjt:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF

Query:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQ-VKSGGLNGRPEKLPDVCYSWW
        SYIAI CLS+L  L+KINV+KAV+YI SCKN+DGGFGC+PG ESH+GQIFCCVGALAITG+LH +DKDLLGWWLCERQ  +SGGLNGRPEKLPDVCYSWW
Subjt:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQ-VKSGGLNGRPEKLPDVCYSWW

Query:  VLSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKIFLGK
        VLSSLIMIDRVHWI+K KLVKFILD QD +NGGISDRP   VD++HTYFGVAGLSLLEYPG+K IDPAYALPV V+N+I   K
Subjt:  VLSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKIFLGK

AT3G12070.2 RAB geranylgeranyl transferase beta subunit 21.4e-14179.86Show/hide
Query:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF
        RMNGAYWGLT L +L KL +V  DEVVSWV+ CQH+SGGF+GN GHDPH+LYTLSAVQ+LALFD+L++LDV+KV+NYIAGLQNEDGSFSGDIWGEVD+RF
Subjt:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF

Query:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQ-VKSGGLNGRPEKLPDVCYSWW
        SYIAI CLS+L  L+KINV+KAV+YI SCKN+DGGFGC+PG ESH+GQIFCCVGALAITG+LH +DKDLLGWWLCERQ  +SGGLNGRPEKLPDVCYSWW
Subjt:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQ-VKSGGLNGRPEKLPDVCYSWW

Query:  VLSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKIFLGK
        VLSSLIMIDRVHWI+K KLVKFILD QD +NGGISDRP   VD++HTYFGVAGLSLLEYPG+K IDPAYALPV V+N+I   K
Subjt:  VLSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKIFLGK

AT5G12210.1 RAB geranylgeranyl transferase beta subunit 13.7e-14580.14Show/hide
Query:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF
        RMNGAYWGLT LD+L KL  V  +EV+SW++ CQH+SGGF+GN GHDPHILYTLSAVQ+LALFD++++LD+ KV++Y+A LQNEDGSFSGD+WGE+D+RF
Subjt:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF

Query:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV
        SYIAI CLS+L  L+KINVEKAV YI SCKN+DGGFGCTPG ESH+GQIFCCVGALAITGSLHH+DKD LGWWLCERQ+K+GGLNGRPEKL DVCYSWWV
Subjt:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV

Query:  LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKIFLGK
        LSSLIMIDRVHWIDK KLVKFILDCQD +NGGISDRP+DAVD++HTYFGVAGLSLLEYPG+K IDPAYALPVDVVN+I   K
Subjt:  LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKIFLGK

AT5G12210.2 RAB geranylgeranyl transferase beta subunit 13.7e-14580.14Show/hide
Query:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF
        RMNGAYWGLT LD+L KL  V  +EV+SW++ CQH+SGGF+GN GHDPHILYTLSAVQ+LALFD++++LD+ KV++Y+A LQNEDGSFSGD+WGE+D+RF
Subjt:  RMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDKVTNYIAGLQNEDGSFSGDIWGEVDSRF

Query:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV
        SYIAI CLS+L  L+KINVEKAV YI SCKN+DGGFGCTPG ESH+GQIFCCVGALAITGSLHH+DKD LGWWLCERQ+K+GGLNGRPEKL DVCYSWWV
Subjt:  SYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWV

Query:  LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKIFLGK
        LSSLIMIDRVHWIDK KLVKFILDCQD +NGGISDRP+DAVD++HTYFGVAGLSLLEYPG+K IDPAYALPVDVVN+I   K
Subjt:  LSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKIFLGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTCGTATCGTTTATCCTGAAGGGCAGTAAGTTAAGGAACTTAGCACTTGAGAGATGGGGGAACTGGCAGCTGAGAAACATGTTAAATACATCATATCTGTTGAA
AAGAATGAATGGTGCATACTGGGGGTTGACCGCACTGGATATTCTTGGAAAGCTCAATACCGTTGATGTTGATGAGGTTGTTTCATGGGTCTTGAAATGTCAGCACCAGT
CAGGTGGTTTTTCTGGCAATATTGGACACGATCCTCATATACTTTACACCCTTAGTGCTGTTCAAGTCTTAGCCCTCTTTGACAGGTTGAGCGTTTTAGATGTCGATAAG
GTGACAAATTATATTGCTGGTTTGCAAAATGAAGATGGTTCCTTTTCAGGGGATATTTGGGGTGAAGTAGATTCAAGGTTTTCTTATATTGCAATATCTTGTCTGTCATT
GTTACATCAATTGGAGAAAATCAATGTTGAGAAGGCTGTGAACTACATTGCTAGTTGCAAAAATATGGATGGGGGATTTGGATGCACGCCCGGTGGAGAGTCTCACTCTG
GACAAATTTTCTGTTGTGTTGGCGCTCTTGCCATAACGGGATCTCTACACCATATTGACAAGGATCTTCTTGGCTGGTGGTTATGCGAGCGACAAGTCAAATCTGGAGGT
CTTAATGGTCGCCCTGAGAAACTTCCTGATGTCTGCTATTCATGGTGGGTTCTTTCAAGCTTGATCATGATTGACAGAGTTCACTGGATTGATAAGGAAAAACTCGTCAA
GTTCATCTTAGACTGCCAGGACACGGAAAATGGCGGTATTTCAGACAGACCGGATGATGCCGTTGATGTCTATCATACATACTTTGGAGTAGCAGGCCTCTCACTTCTTG
AATATCCAGGTCTAAAAGCCATTGATCCAGCTTATGCTTTACCAGTTGATGTCGTGAACAAGATTTTCTTGGGCAAAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTCGTATCGTTTATCCTGAAGGGCAGTAAGTTAAGGAACTTAGCACTTGAGAGATGGGGGAACTGGCAGCTGAGAAACATGTTAAATACATCATATCTGTTGAA
AAGAATGAATGGTGCATACTGGGGGTTGACCGCACTGGATATTCTTGGAAAGCTCAATACCGTTGATGTTGATGAGGTTGTTTCATGGGTCTTGAAATGTCAGCACCAGT
CAGGTGGTTTTTCTGGCAATATTGGACACGATCCTCATATACTTTACACCCTTAGTGCTGTTCAAGTCTTAGCCCTCTTTGACAGGTTGAGCGTTTTAGATGTCGATAAG
GTGACAAATTATATTGCTGGTTTGCAAAATGAAGATGGTTCCTTTTCAGGGGATATTTGGGGTGAAGTAGATTCAAGGTTTTCTTATATTGCAATATCTTGTCTGTCATT
GTTACATCAATTGGAGAAAATCAATGTTGAGAAGGCTGTGAACTACATTGCTAGTTGCAAAAATATGGATGGGGGATTTGGATGCACGCCCGGTGGAGAGTCTCACTCTG
GACAAATTTTCTGTTGTGTTGGCGCTCTTGCCATAACGGGATCTCTACACCATATTGACAAGGATCTTCTTGGCTGGTGGTTATGCGAGCGACAAGTCAAATCTGGAGGT
CTTAATGGTCGCCCTGAGAAACTTCCTGATGTCTGCTATTCATGGTGGGTTCTTTCAAGCTTGATCATGATTGACAGAGTTCACTGGATTGATAAGGAAAAACTCGTCAA
GTTCATCTTAGACTGCCAGGACACGGAAAATGGCGGTATTTCAGACAGACCGGATGATGCCGTTGATGTCTATCATACATACTTTGGAGTAGCAGGCCTCTCACTTCTTG
AATATCCAGGTCTAAAAGCCATTGATCCAGCTTATGCTTTACCAGTTGATGTCGTGAACAAGATTTTCTTGGGCAAAAAATAG
Protein sequenceShow/hide protein sequence
MSLVSFILKGSKLRNLALERWGNWQLRNMLNTSYLLKRMNGAYWGLTALDILGKLNTVDVDEVVSWVLKCQHQSGGFSGNIGHDPHILYTLSAVQVLALFDRLSVLDVDK
VTNYIAGLQNEDGSFSGDIWGEVDSRFSYIAISCLSLLHQLEKINVEKAVNYIASCKNMDGGFGCTPGGESHSGQIFCCVGALAITGSLHHIDKDLLGWWLCERQVKSGG
LNGRPEKLPDVCYSWWVLSSLIMIDRVHWIDKEKLVKFILDCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAYALPVDVVNKIFLGKK