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MS028312 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028312
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold47:3169997..3170269
RNA-Seq ExpressionMS028312
SyntenyMS028312
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031619.1 hypothetical protein E6C27_scaffold139G003870 [Cucumis melo var. makuwa]4.5e-1858.82Show/hide
Query:  MAKIYLI-CLILVEMLVIEAM----------------GGDDSERSEVELAPSPSEIRRLGKHHADKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGID
        MAK  L+ CLI+ E+L+I+AM                  +   R   ++A +P EIRRLGKHH DKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDG+D
Subjt:  MAKIYLI-CLILVEMLVIEAM----------------GGDDSERSEVELAPSPSEIRRLGKHHADKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGID

Query:  AV
        +V
Subjt:  AV

KAE8075791.1 hypothetical protein FH972_014479 [Carpinus fangiana]4.7e-1547.37Show/hide
Query:  MAKIYLICLILVEMLVIEAM--GGDDSERS--------------------------------EVELAPSPSEIRRLGKHHADKSVAGGGVIIGGLVTAIF
        M ++ L+C ILVE+LV++AM    + SE++                                + +LA +P+ IRRLGKHH+DKSVAGGGVIIGGLVT +F
Subjt:  MAKIYLICLILVEMLVIEAM--GGDDSERS--------------------------------EVELAPSPSEIRRLGKHHADKSVAGGGVIIGGLVTAIF

Query:  AAVFCYIRVTRKRD
        AAVFCYIRVTR+RD
Subjt:  AAVFCYIRVTRKRD

KAG6572323.1 hypothetical protein SDJN03_29051, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2163Show/hide
Query:  MAKIYLICLILVEMLVIEAMGGD-DSERSEVELAPSPS--------------EIRRLGKHHADKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGIDAV
        MAKI L+CLIL ++L+I+AM     +  S V  AP PS              EIRRLGKHH DKSVAGGGVIIGGLVTA+FAAVFCYIRVTRKRDG+D+V
Subjt:  MAKIYLICLILVEMLVIEAMGGD-DSERSEVELAPSPS--------------EIRRLGKHHADKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGIDAV

KAG7011935.1 hypothetical protein SDJN02_26843, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-2062Show/hide
Query:  MAKIYLICLILVEMLVIEAMGGD-DSERSEVELAPSPS--------------EIRRLGKHHADKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGIDAV
        MAKI L+ LIL ++L+I+AM     +  S V  AP PS              EIRRLGKHH DKSVAGGGVIIGGLVTA+FAAVFCYIRVTRKRDG+D+V
Subjt:  MAKIYLICLILVEMLVIEAMGGD-DSERSEVELAPSPS--------------EIRRLGKHHADKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGIDAV

KDP32228.1 hypothetical protein JCGZ_13835 [Jatropha curcas]6.1e-1556Show/hide
Query:  MAKIYLI--CLILVEMLVIEAMGGDDSERSEVELAPSP------------SEIRRLGKHH-ADKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGIDAV
        MA++ L+  CLIL  +L+++A   D+SE+    +A  P             EIRRLGKHH +DKSVAGGGVIIGGLVTAIFAAVFCYIRVTRK+   D V
Subjt:  MAKIYLI--CLILVEMLVIEAMGGDDSERSEVELAPSP------------SEIRRLGKHH-ADKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGIDAV

TrEMBL top hitse value%identityAlignment
A0A067KB75 Uncharacterized protein2.9e-1556Show/hide
Query:  MAKIYLI--CLILVEMLVIEAMGGDDSERSEVELAPSP------------SEIRRLGKHH-ADKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGIDAV
        MA++ L+  CLIL  +L+++A   D+SE+    +A  P             EIRRLGKHH +DKSVAGGGVIIGGLVTAIFAAVFCYIRVTRK+   D V
Subjt:  MAKIYLI--CLILVEMLVIEAMGGDDSERSEVELAPSP------------SEIRRLGKHH-ADKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGIDAV

A0A0A0K3N0 Uncharacterized protein3.7e-1855.88Show/hide
Query:  MAKIYLI-CLILVEMLVIEAMGGDDSERSEVELAPSPS----------------EIRRLGKHHADKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGID
        MAKI L+ CLI+ E+ +I+A+    +  +E+ L+ +P                 EIRRLGKHH DKS+AGGGVIIGGLVTA+FAAVFCYIRVTRKRDG+D
Subjt:  MAKIYLI-CLILVEMLVIEAMGGDDSERSEVELAPSPS----------------EIRRLGKHHADKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGID

Query:  AV
        +V
Subjt:  AV

A0A5D3C590 Uncharacterized protein2.2e-1858.82Show/hide
Query:  MAKIYLI-CLILVEMLVIEAM----------------GGDDSERSEVELAPSPSEIRRLGKHHADKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGID
        MAK  L+ CLI+ E+L+I+AM                  +   R   ++A +P EIRRLGKHH DKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDG+D
Subjt:  MAKIYLI-CLILVEMLVIEAM----------------GGDDSERSEVELAPSPSEIRRLGKHHADKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGID

Query:  AV
        +V
Subjt:  AV

A0A5N6RDG0 Uncharacterized protein2.3e-1547.37Show/hide
Query:  MAKIYLICLILVEMLVIEAM--GGDDSERS--------------------------------EVELAPSPSEIRRLGKHHADKSVAGGGVIIGGLVTAIF
        M ++ L+C ILVE+LV++AM    + SE++                                + +LA +P+ IRRLGKHH+DKSVAGGGVIIGGLVT +F
Subjt:  MAKIYLICLILVEMLVIEAM--GGDDSERS--------------------------------EVELAPSPSEIRRLGKHHADKSVAGGGVIIGGLVTAIF

Query:  AAVFCYIRVTRKRD
        AAVFCYIRVTR+RD
Subjt:  AAVFCYIRVTRKRD

A5BAN6 Uncharacterized protein5.0e-1553.12Show/hide
Query:  MAKIYLICLILVEMLVIEAM---GGDDSERSEVELAPSPS--------EI------RRLGKHHADKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKR
        M ++ L+CL+L E+LV++A+    G D   S V +A  PS        E+      RRLGKHH D+S+AGGGVIIGGL TAIFAAVFCYIR+TR+R
Subjt:  MAKIYLICLILVEMLVIEAM---GGDDSERSEVELAPSPS--------EI------RRLGKHHADKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09280.1 unknown protein2.6e-0850.85Show/hide
Query:  GDDSERSEVELAPSPSEIRRLGKHHA--DKSVAGGGVIIGGLVTAIFAAVFCYIRVTRK
        G+++E  EV       E  R G HH+  ++SVAGGGVI+GGL T     VFCYIR TRK
Subjt:  GDDSERSEVELAPSPSEIRRLGKHHA--DKSVAGGGVIIGGLVTAIFAAVFCYIRVTRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATCCCAATGGCCAAAATTTACCTTATTTGCTTAATCTTAGTCGAGATGTTGGTGATTGAAGCAATGGGTGGAGATGATTCGGAGAGATCAGAAGTAGAACTGGC
GCCGAGCCCATCGGAGATCAGACGGCTGGGAAAGCACCACGCCGATAAGTCGGTGGCCGGCGGCGGAGTCATCATCGGCGGCCTTGTCACCGCTATCTTTGCGGCCGTTT
TTTGTTACATTCGGGTCACTAGAAAAAGAGATGGCATTGATGCAGTTCGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATCCCAATGGCCAAAATTTACCTTATTTGCTTAATCTTAGTCGAGATGTTGGTGATTGAAGCAATGGGTGGAGATGATTCGGAGAGATCAGAAGTAGAACTGGC
GCCGAGCCCATCGGAGATCAGACGGCTGGGAAAGCACCACGCCGATAAGTCGGTGGCCGGCGGCGGAGTCATCATCGGCGGCCTTGTCACCGCTATCTTTGCGGCCGTTT
TTTGTTACATTCGGGTCACTAGAAAAAGAGATGGCATTGATGCAGTTCGCTGA
Protein sequenceShow/hide protein sequence
MEIPMAKIYLICLILVEMLVIEAMGGDDSERSEVELAPSPSEIRRLGKHHADKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGIDAVR