; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS028318 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028318
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein TIC 20
Genome locationscaffold47:3306836..3308646
RNA-Seq ExpressionMS028318
SyntenyMS028318
Gene Ontology termsGO:0045037 - protein import into chloroplast stroma (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR005691 - Chloroplast protein import component Tic20


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147822.1 protein TIC 20-IV, chloroplastic-like [Momordica charantia]2.6e-17199.01Show/hide
Query:  MVAGAPSIARLRSPNPLLPAAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMGRQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASSPHLS
        MV GAPSIARLRSPNPLLPAAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMGR+LKLSIRNAKQESGQELTFFSSRGTP+SHLSAASSPHLS
Subjt:  MVAGAPSIARLRSPNPLLPAAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMGRQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASSPHLS

Query:  GEQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFPMLYF
        GEQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFPMLYF
Subjt:  GEQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFPMLYF

Query:  NLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIGRYY
        NLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIGRYY
Subjt:  NLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIGRYY

Query:  RPF
        RPF
Subjt:  RPF

XP_022952618.1 protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita moschata]1.6e-12376.22Show/hide
Query:  MVAGAPSI-ARLR--SPNPLLP-AAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMGRQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASS
        M+A APS  ARLR  S NPLL   A   +TA SVR +DVVLK C KPSQV +PQC RL  AN+G  L LSI N KQE  +EL F SSRG  +SHLSAA+S
Subjt:  MVAGAPSI-ARLR--SPNPLLP-AAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMGRQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASS

Query:  PHLSGEQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFP
        P L GEQGSLFHKLPLLPPR  A KSPQ FRDDSY  K +S V  KPEWWWRTLACVPYLMALQMS+TAYYLLPLLEHL++DNLIFYVPG+VQNLPWWFP
Subjt:  PHLSGEQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFP

Query:  MLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSI
        MLYFNLAYFGVVRNK+ PHF+RFHVMMGMLL TAL+I+W TSNF+PLIHYNGTY+MQYWAAVGF+YISIL +CIRSSLLGTYA+IPFI +NALIHTFFS 
Subjt:  MLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSI

Query:  GRYYRPF
        GRY+RPF
Subjt:  GRYYRPF

XP_022952620.1 protein TIC 20-IV, chloroplastic-like isoform X3 [Cucurbita moschata]1.6e-12376.22Show/hide
Query:  MVAGAPSI-ARLR--SPNPLLP-AAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMGRQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASS
        M+A APS  ARLR  S NPLL   A   +TA SVR +DVVLK C KPSQV +PQC RL  AN+G  L LSI N KQE  +EL F SSRG  +SHLSAA+S
Subjt:  MVAGAPSI-ARLR--SPNPLLP-AAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMGRQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASS

Query:  PHLSGEQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFP
        P L GEQGSLFHKLPLLPPR  A KSPQ FRDDSY  K +S V  KPEWWWRTLACVPYLMALQMS+TAYYLLPLLEHL++DNLIFYVPG+VQNLPWWFP
Subjt:  PHLSGEQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFP

Query:  MLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSI
        MLYFNLAYFGVVRNK+ PHF+RFHVMMGMLL TAL+I+W TSNF+PLIHYNGTY+MQYWAAVGF+YISIL +CIRSSLLGTYA+IPFI +NALIHTFFS 
Subjt:  MLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSI

Query:  GRYYRPF
        GRY+RPF
Subjt:  GRYYRPF

XP_023554543.1 protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]6.4e-12577.2Show/hide
Query:  MVAGAPSI-ARLR--SPNPLLP-AAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMGRQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASS
        M A APS  ARLR  SPNPLL   A   +TA SVR +DVVLK C KPSQV +PQC RL  AN+G  L LSI N KQE  +EL F SSRG  MSHLSAA+S
Subjt:  MVAGAPSI-ARLR--SPNPLLP-AAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMGRQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASS

Query:  PHLSGEQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFP
        P L GEQGSLFHKLPLLPPR  A KSPQAFRDDSY  K +S V  KPEWWWRTLACVPYLMALQMS+TAYYLLPLLEHL++DNLIFYVPG+VQNLPWWFP
Subjt:  PHLSGEQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFP

Query:  MLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSI
        MLYFNLAYFGVVRNK+ PHF+RFHVMMGMLL TAL+I+W TSNF+PLIHYNGTY+MQYWAAVGF+YISIL +CIRSSLLGTYA+IPFI +NALIHTFFS 
Subjt:  MLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSI

Query:  GRYYRPF
        GRY+RPF
Subjt:  GRYYRPF

XP_038888476.1 protein TIC 20-IV, chloroplastic [Benincasa hispida]6.2e-12877.45Show/hide
Query:  MVAGAPSIARL--RSPNPLL-PAAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMGRQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASSP
        M A  PS ARL   SPNPLL P A   +T  SVR KDV LKRC KPSQV +PQC R G +N+  +L LSI N KQE  +EL   SS+G  +S LSAA+SP
Subjt:  MVAGAPSIARL--RSPNPLL-PAAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMGRQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASSP

Query:  HLSGEQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFPM
        HLSGEQGSLFHKLPLLPPRN A KSPQAFRDDSY  K +S V  KPEWWWRTLACVPYLMALQMS+TAYYLLPLLEHLD+DNLIFY+PG VQ LPWWFPM
Subjt:  HLSGEQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFPM

Query:  LYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIG
        LYFNLAYFGVVRNK+ PHF+RFHVMMGMLLET L+IVW +SNF+PLIHYNGTYAMQYWAAVGF+YIS LLVCIRSSLLGTYA+IPFIF+NALIHTFFSIG
Subjt:  LYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIG

Query:  RYYRPF
        RYYRPF
Subjt:  RYYRPF

TrEMBL top hitse value%identityAlignment
A0A6J1D3E6 Protein TIC 201.3e-17199.01Show/hide
Query:  MVAGAPSIARLRSPNPLLPAAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMGRQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASSPHLS
        MV GAPSIARLRSPNPLLPAAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMGR+LKLSIRNAKQESGQELTFFSSRGTP+SHLSAASSPHLS
Subjt:  MVAGAPSIARLRSPNPLLPAAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMGRQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASSPHLS

Query:  GEQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFPMLYF
        GEQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFPMLYF
Subjt:  GEQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFPMLYF

Query:  NLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIGRYY
        NLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIGRYY
Subjt:  NLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIGRYY

Query:  RPF
        RPF
Subjt:  RPF

A0A6J1GL44 Protein TIC 207.6e-12476.22Show/hide
Query:  MVAGAPSI-ARLR--SPNPLLP-AAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMGRQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASS
        M+A APS  ARLR  S NPLL   A   +TA SVR +DVVLK C KPSQV +PQC RL  AN+G  L LSI N KQE  +EL F SSRG  +SHLSAA+S
Subjt:  MVAGAPSI-ARLR--SPNPLLP-AAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMGRQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASS

Query:  PHLSGEQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFP
        P L GEQGSLFHKLPLLPPR  A KSPQ FRDDSY  K +S V  KPEWWWRTLACVPYLMALQMS+TAYYLLPLLEHL++DNLIFYVPG+VQNLPWWFP
Subjt:  PHLSGEQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFP

Query:  MLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSI
        MLYFNLAYFGVVRNK+ PHF+RFHVMMGMLL TAL+I+W TSNF+PLIHYNGTY+MQYWAAVGF+YISIL +CIRSSLLGTYA+IPFI +NALIHTFFS 
Subjt:  MLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSI

Query:  GRYYRPF
        GRY+RPF
Subjt:  GRYYRPF

A0A6J1GM78 Protein TIC 202.4e-12276.22Show/hide
Query:  MVAGAPSI-ARLR--SPNPLLP-AAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMGRQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASS
        M+A APS  ARLR  S NPLL   A   +TA SVR  DVVLK C KPSQV +PQC RL  AN+G  L LSI N KQE  +EL F SSRG  +SHLSAA+S
Subjt:  MVAGAPSI-ARLR--SPNPLLP-AAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMGRQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASS

Query:  PHLSGEQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFP
        P L GEQGSLFHKLPLLPPR  A KSPQ FRDDSY  K +S V  KPEWWWRTLACVPYLMALQMS+TAYYLLPLLEHL++DNLIFYVPG+VQNLPWWFP
Subjt:  PHLSGEQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFP

Query:  MLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSI
        MLYFNLAYFGVVRNK+ PHF+RFHVMMGMLL TAL+I+W TSNF+PLIHYNGTY+MQYWAAVGF+YISIL +CIRSSLLGTYA+IPFI +NALIHTFFS 
Subjt:  MLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSI

Query:  GRYYRPF
        GRY+RPF
Subjt:  GRYYRPF

A0A6J1GMA4 Protein TIC 207.6e-12476.22Show/hide
Query:  MVAGAPSI-ARLR--SPNPLLP-AAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMGRQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASS
        M+A APS  ARLR  S NPLL   A   +TA SVR +DVVLK C KPSQV +PQC RL  AN+G  L LSI N KQE  +EL F SSRG  +SHLSAA+S
Subjt:  MVAGAPSI-ARLR--SPNPLLP-AAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMGRQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASS

Query:  PHLSGEQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFP
        P L GEQGSLFHKLPLLPPR  A KSPQ FRDDSY  K +S V  KPEWWWRTLACVPYLMALQMS+TAYYLLPLLEHL++DNLIFYVPG+VQNLPWWFP
Subjt:  PHLSGEQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFP

Query:  MLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSI
        MLYFNLAYFGVVRNK+ PHF+RFHVMMGMLL TAL+I+W TSNF+PLIHYNGTY+MQYWAAVGF+YISIL +CIRSSLLGTYA+IPFI +NALIHTFFS 
Subjt:  MLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSI

Query:  GRYYRPF
        GRY+RPF
Subjt:  GRYYRPF

A0A6J1HZ71 Protein TIC 201.7e-12375.9Show/hide
Query:  MVAGAP-SIARLR--SPNPLLP-AAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMGRQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASS
        M A AP S ARLR  SPNPLL   A   +TA SVR +DVVLK C KPSQV +PQC RLG AN+G  L L I N KQE  +EL F SSRG  +SHLSAA+S
Subjt:  MVAGAP-SIARLR--SPNPLLP-AAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMGRQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASS

Query:  PHLSGEQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFP
        P L GEQGSLFHKLPLLPPR  A KSPQAFRDDSY  K +S +  KPEWWWRTLACVPYLMALQMS+TAYYLLPLLEHL++DNLIFYVPG+VQNLPWWFP
Subjt:  PHLSGEQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFP

Query:  MLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSI
        MLY NLAYFGVVRNK+ PHF+RFHVMMGMLL TAL+I+W TSNF+PLIHYNGTY+MQYWAAVGF+YISIL +CIRSSL+GTYA+IPFI +NALIHTFFS 
Subjt:  MLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSI

Query:  GRYYRPF
        GRY+RPF
Subjt:  GRYYRPF

SwissProt top hitse value%identityAlignment
Q8GZ79 Protein TIC 20-I, chloroplastic5.0e-4849.07Show/hide
Query:  SRGTPMSHLSAASSPHLSGEQGSLFHKLPLLPPRNSASKSPQAFRD--DSYRTKLYSTVKTKPEWWWRTLACVPYLMAL----QMSNTAYYLLPLLEHLD
        SRG P+S+LSA+SS  L+GEQGSL   LP+LP R     +P+A +D   S+R   +  +  KP+WWWRTLAC+PYLM L      + TAY+L P LE  D
Subjt:  SRGTPMSHLSAASSPHLSGEQGSLFHKLPLLPPRNSASKSPQAFRD--DSYRTKLYSTVKTKPEWWWRTLACVPYLMAL----QMSNTAYYLLPLLEHLD

Query:  IDNLIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLG
         + L +   G++  LP WF M YF +AY G+VR K+WPHF RFHV+MGMLLE AL ++   S ++PL  Y G + M +W AV F Y+  +L  IR +L G
Subjt:  IDNLIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLG

Query:  TYARIPFIFDNALI
         YA IPF+ D A I
Subjt:  TYARIPFIFDNALI

Q9ZQZ9 Protein TIC 20-IV, chloroplastic2.9e-5643.89Show/hide
Query:  PRLGYANM--GRQLKLSIRNAKQESGQEL--------TFFSSRGTPMSHLSAASSPHLSGEQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKT
        PR+ + N+    +L+LS  +  +   +E+          F++  T  + L A   P L+   G   H+ P+ P R          +DD ++ KL   +  
Subjt:  PRLGYANM--GRQLKLSIRNAKQESGQEL--------TFFSSRGTPMSHLSAASSPHLSGEQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKT

Query:  KPEWWWRTLACVPYLMALQMSNTAYYLLPLLE-HLDIDNLIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNF
        +PEWWWRTLACVPYL++LQ+S+  +Y+ P LE H  I ++I+++PG++   P WF M+Y  L Y  VV+NK+ PH+LRFH+MMGMLLETAL ++WCTSNF
Subjt:  KPEWWWRTLACVPYLMALQMSNTAYYLLPLLE-HLDIDNLIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNF

Query:  LPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIGRYYRP
         PLIH+ G + M YW A+GF YI +LL CIR +L G YA+IPF+ D A IHT F++G + RP
Subjt:  LPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIGRYYRP

Q9ZST8 Protein TIC 20, chloroplastic5.8e-3639.15Show/hide
Query:  RGTPMSHLSAASSPHLSGEQGSLFHKLPLLPPRNSASKSPQAFRDDS-YRTKLYSTVKTKPEWWWRTLACVPYLM----ALQMSNTAYYLLPLLEHLDID
        RG   + +SA SS  LSG Q  L   +P+LP  + +S +P+A +D S +R   +  +  KP WWWRTL+C+PYL+    A   + TAY+L P + +    
Subjt:  RGTPMSHLSAASSPHLSGEQGSLFHKLPLLPPRNSASKSPQAFRDDS-YRTKLYSTVKTKPEWWWRTLACVPYLM----ALQMSNTAYYLLPLLEHLDID

Query:  NLIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTY
           F +  ++  LP W  + YF +AY  +VR K+WPHF RFHV +GML+E AL +    S ++P   Y G   M +W    FV++   + CIR +L+G Y
Subjt:  NLIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTY

Query:  ARIPFIFDNALI
        A +PF+ D A I
Subjt:  ARIPFIFDNALI

Arabidopsis top hitse value%identityAlignment
AT1G04940.1 translocon at the inner envelope membrane of chloroplasts 203.6e-4949.07Show/hide
Query:  SRGTPMSHLSAASSPHLSGEQGSLFHKLPLLPPRNSASKSPQAFRD--DSYRTKLYSTVKTKPEWWWRTLACVPYLMAL----QMSNTAYYLLPLLEHLD
        SRG P+S+LSA+SS  L+GEQGSL   LP+LP R     +P+A +D   S+R   +  +  KP+WWWRTLAC+PYLM L      + TAY+L P LE  D
Subjt:  SRGTPMSHLSAASSPHLSGEQGSLFHKLPLLPPRNSASKSPQAFRD--DSYRTKLYSTVKTKPEWWWRTLACVPYLMAL----QMSNTAYYLLPLLEHLD

Query:  IDNLIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLG
         + L +   G++  LP WF M YF +AY G+VR K+WPHF RFHV+MGMLLE AL ++   S ++PL  Y G + M +W AV F Y+  +L  IR +L G
Subjt:  IDNLIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLG

Query:  TYARIPFIFDNALI
         YA IPF+ D A I
Subjt:  TYARIPFIFDNALI

AT1G04945.3 HIT-type Zinc finger family protein2.6e-4448.48Show/hide
Query:  SRGTPMSHLSAASSPHLSGEQGSLFHKLPLLPPRNSASKSPQAFRD--DSYRTKLYSTVKTKPEWWWRTLACVPYLMAL----QMSNTAYYLLPLLEHLD
        SRG P+S+LSA+SS  L+GEQGSL   LP+LP R     +P+A +D   S+R   +  +  KP+WWWRTLAC+PYLM L      + TAY+L P LE  D
Subjt:  SRGTPMSHLSAASSPHLSGEQGSLFHKLPLLPPRNSASKSPQAFRD--DSYRTKLYSTVKTKPEWWWRTLACVPYLMAL----QMSNTAYYLLPLLEHLD

Query:  IDNLIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSL
         + L +   G++  LP WF M YF +AY G+VR K+WPHF RFHV+MGMLLE AL ++   S ++PL  Y G + M +W AV F Y+  +L  IR +L
Subjt:  IDNLIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSL

AT4G03320.1 translocon at the inner envelope membrane of chloroplasts 20-IV2.1e-5743.89Show/hide
Query:  PRLGYANM--GRQLKLSIRNAKQESGQEL--------TFFSSRGTPMSHLSAASSPHLSGEQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKT
        PR+ + N+    +L+LS  +  +   +E+          F++  T  + L A   P L+   G   H+ P+ P R          +DD ++ KL   +  
Subjt:  PRLGYANM--GRQLKLSIRNAKQESGQEL--------TFFSSRGTPMSHLSAASSPHLSGEQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKT

Query:  KPEWWWRTLACVPYLMALQMSNTAYYLLPLLE-HLDIDNLIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNF
        +PEWWWRTLACVPYL++LQ+S+  +Y+ P LE H  I ++I+++PG++   P WF M+Y  L Y  VV+NK+ PH+LRFH+MMGMLLETAL ++WCTSNF
Subjt:  KPEWWWRTLACVPYLMALQMSNTAYYLLPLLE-HLDIDNLIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNF

Query:  LPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIGRYYRP
         PLIH+ G + M YW A+GF YI +LL CIR +L G YA+IPF+ D A IHT F++G + RP
Subjt:  LPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIGRYYRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGCGGGTGCTCCGAGCATCGCTCGACTCCGCTCACCGAATCCGCTCCTCCCTGCGGCTGCGCCGCCGTCGACGGCAGTCTCCGTACGGTGCAAGGATGTGGTTCT
GAAAAGATGTTCCAAGCCCAGCCAAGTAGCTATGCCCCAATGTCCTCGATTGGGTTATGCTAATATGGGCAGACAACTTAAGTTATCTATTAGAAATGCTAAACAGGAAT
CTGGTCAGGAACTGACATTTTTTTCTTCTAGAGGAACGCCAATGTCGCACCTTTCTGCAGCGTCATCCCCACATCTGTCCGGAGAACAAGGCAGTCTATTTCATAAACTT
CCACTCTTACCTCCACGAAATTCTGCTTCAAAGAGTCCTCAAGCATTCAGAGATGACTCTTACCGTACAAAACTCTACTCTACGGTAAAGACAAAACCAGAATGGTGGTG
GAGGACTTTGGCTTGTGTTCCATATTTGATGGCTTTGCAGATGTCTAATACAGCATATTATCTCCTGCCCTTGCTGGAACACTTGGACATTGATAATTTAATATTTTACG
TCCCTGGATCTGTTCAAAATTTACCATGGTGGTTTCCGATGCTGTACTTCAACCTCGCATACTTTGGAGTCGTGAGGAATAAAGATTGGCCACATTTCTTAAGATTCCAT
GTGATGATGGGGATGTTGTTAGAAACAGCGCTCAACATCGTATGGTGCACGAGCAATTTTCTGCCACTTATACATTACAATGGTACATATGCTATGCAATACTGGGCAGC
AGTGGGGTTCGTCTACATTTCCATCTTGCTGGTGTGCATAAGGAGTTCTCTCTTGGGCACTTATGCCAGAATACCATTCATTTTCGATAACGCACTTATCCATACTTTTT
TCAGTATAGGGCGATACTATCGGCCGTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGCGGGTGCTCCGAGCATCGCTCGACTCCGCTCACCGAATCCGCTCCTCCCTGCGGCTGCGCCGCCGTCGACGGCAGTCTCCGTACGGTGCAAGGATGTGGTTCT
GAAAAGATGTTCCAAGCCCAGCCAAGTAGCTATGCCCCAATGTCCTCGATTGGGTTATGCTAATATGGGCAGACAACTTAAGTTATCTATTAGAAATGCTAAACAGGAAT
CTGGTCAGGAACTGACATTTTTTTCTTCTAGAGGAACGCCAATGTCGCACCTTTCTGCAGCGTCATCCCCACATCTGTCCGGAGAACAAGGCAGTCTATTTCATAAACTT
CCACTCTTACCTCCACGAAATTCTGCTTCAAAGAGTCCTCAAGCATTCAGAGATGACTCTTACCGTACAAAACTCTACTCTACGGTAAAGACAAAACCAGAATGGTGGTG
GAGGACTTTGGCTTGTGTTCCATATTTGATGGCTTTGCAGATGTCTAATACAGCATATTATCTCCTGCCCTTGCTGGAACACTTGGACATTGATAATTTAATATTTTACG
TCCCTGGATCTGTTCAAAATTTACCATGGTGGTTTCCGATGCTGTACTTCAACCTCGCATACTTTGGAGTCGTGAGGAATAAAGATTGGCCACATTTCTTAAGATTCCAT
GTGATGATGGGGATGTTGTTAGAAACAGCGCTCAACATCGTATGGTGCACGAGCAATTTTCTGCCACTTATACATTACAATGGTACATATGCTATGCAATACTGGGCAGC
AGTGGGGTTCGTCTACATTTCCATCTTGCTGGTGTGCATAAGGAGTTCTCTCTTGGGCACTTATGCCAGAATACCATTCATTTTCGATAACGCACTTATCCATACTTTTT
TCAGTATAGGGCGATACTATCGGCCGTTCTAG
Protein sequenceShow/hide protein sequence
MVAGAPSIARLRSPNPLLPAAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMGRQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASSPHLSGEQGSLFHKL
PLLPPRNSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFH
VMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIGRYYRPF