; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS028325 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028325
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLEA_2 domain-containing protein
Genome locationscaffold47:3389624..3390186
RNA-Seq ExpressionMS028325
SyntenyMS028325
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB5512790.1 hypothetical protein DKX38_029818 [Salix brachista]1.0e-0648.81Show/hide
Query:  VSASCTAAQTKLIITSLHGEHEPHAWEQSGNLDPATATV-PAAAAAAVFCFSFWWEMGLEEMGGGNIEKAMTRSRQNQAEAFIV
        VSAS   AQ KL ITSLHGEHEPHA EQSGNLDPA  T   A  A   F  +    M L EM  G   +A+T +      A ++
Subjt:  VSASCTAAQTKLIITSLHGEHEPHAWEQSGNLDPATATV-PAAAAAAVFCFSFWWEMGLEEMGGGNIEKAMTRSRQNQAEAFIV
RZS13626.1 hypothetical protein BHM03_00045231 [Ensete ventricosum]1.7e-0662.26Show/hide
Query:  MGHVSASCTAAQTKLIITSLHGEHEPHAWEQSGNLDPATATV---PAAAAAAV
        MGHVSAS + A TKL IT   G H+PHAWEQSG LDPAT +V   P A  A V
Subjt:  MGHVSASCTAAQTKLIITSLHGEHEPHAWEQSGNLDPATATV---PAAAAAAV
VFQ83249.1 unnamed protein product [Cuscuta campestris]2.5e-0568.29Show/hide
Query:  MGHVSASCTAAQTKLIITSLHGEHEPHAWEQSGNLDPATAT
        MG VSAS     TKL ITSLHG H+PHA+EQSG+LDPA  T
Subjt:  MGHVSASCTAAQTKLIITSLHGEHEPHAWEQSGNLDPATAT
TrEMBL top hitse value%identityAlignment
A0A484M3V8 LEA_2 domain-containing protein1.2e-0568.29Show/hide
Query:  MGHVSASCTAAQTKLIITSLHGEHEPHAWEQSGNLDPATAT
        MG VSAS     TKL ITSLHG H+PHA+EQSG+LDPA  T
Subjt:  MGHVSASCTAAQTKLIITSLHGEHEPHAWEQSGNLDPATAT
A0A5N5J3M9 Uncharacterized protein4.9e-0748.81Show/hide
Query:  VSASCTAAQTKLIITSLHGEHEPHAWEQSGNLDPATATV-PAAAAAAVFCFSFWWEMGLEEMGGGNIEKAMTRSRQNQAEAFIV
        VSAS   AQ KL ITSLHGEHEPHA EQSGNLDPA  T   A  A   F  +    M L EM  G   +A+T +      A ++
Subjt:  VSASCTAAQTKLIITSLHGEHEPHAWEQSGNLDPATATV-PAAAAAAVFCFSFWWEMGLEEMGGGNIEKAMTRSRQNQAEAFIV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACATGTCTCCGCCTCTTGCACCGCCGCACAAACGAAACTGATCATCACAAGCCTGCACGGCGAGCACGAGCCGCACGCGTGGGAGCAATCCGGCAATCTCGACCC
CGCCACTGCAACCGTCCCCGCCGCCGCCGCCGCCGCCGTCTTCTGCTTCTCTTTTTGGTGGGAAATGGGTCTGGAGGAAATGGGTGGTGGGAATATTGAGAAAGCAATGA
CGAGGAGTAGACAAAACCAAGCTGAAGCCTTCATTGTTGGGGAATCCGAGCTTGGAAAGGAAAATAATGGGATTGATTGTGAAAGGCAGCTCAAAATCAGAATAGAAACT
GCCTCCTTAACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGACATGTCTCCGCCTCTTGCACCGCCGCACAAACGAAACTGATCATCACAAGCCTGCACGGCGAGCACGAGCCGCACGCGTGGGAGCAATCCGGCAATCTCGACCC
CGCCACTGCAACCGTCCCCGCCGCCGCCGCCGCCGCCGTCTTCTGCTTCTCTTTTTGGTGGGAAATGGGTCTGGAGGAAATGGGTGGTGGGAATATTGAGAAAGCAATGA
CGAGGAGTAGACAAAACCAAGCTGAAGCCTTCATTGTTGGGGAATCCGAGCTTGGAAAGGAAAATAATGGGATTGATTGTGAAAGGCAGCTCAAAATCAGAATAGAAACT
GCCTCCTTAACGTGA
Protein sequenceShow/hide protein sequence
MGHVSASCTAAQTKLIITSLHGEHEPHAWEQSGNLDPATATVPAAAAAAVFCFSFWWEMGLEEMGGGNIEKAMTRSRQNQAEAFIVGESELGKENNGIDCERQLKIRIET
ASLT