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MS028346 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028346
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUPF0725 protein At4g29550-like
Genome locationscaffold110:554516..555318
RNA-Seq ExpressionMS028346
SyntenyMS028346
Gene Ontology termsNA
InterPro domainsIPR006525 - Cystatin-related, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7112378.1 hypothetical protein RHSIM_RhsimUnG0235700 [Rhododendron simsii]1.3e-0736Show/hide
Query:  PKPKPKSKSKCTPQPP---------------YYGFIDINDPNDPI--MTEEELEAYAREVDASENTNFEVVEIEKANLGGSSGIRLYITFKVKPSDTPAE
        P    K + + TP+PP               Y    D+ D +D +  MTE+E E Y R+++ SE  N E V++ KAN    +G+R YITF VK  D    
Subjt:  PKPKPKSKSKCTPQPP---------------YYGFIDINDPNDPI--MTEEELEAYAREVDASENTNFEVVEIEKANLGGSSGIRLYITFKVKPSDTPAE

Query:  HTTTTFQAKVIDGLDGYCIELCRIK
        +TT  FQA V DG+    +  CR K
Subjt:  HTTTTFQAKVIDGLDGYCIELCRIK

XP_022149809.1 uncharacterized protein LOC111018153 [Momordica charantia]3.9e-2054.46Show/hide
Query:  MTEEELEAYAREV-------------------------------DASENTNFEVVEIEKANLGGSSGIRLYITFKVKPSDTPAEHTTTTFQAKVIDGLDG
        MT+EELEAY RE+                               +   NTNFEVVEIEKAN+GGS GI LYITFKVKPS TPAE+ TTTFQA+V+D   G
Subjt:  MTEEELEAYAREV-------------------------------DASENTNFEVVEIEKANLGGSSGIRLYITFKVKPSDTPAEHTTTTFQAKVIDGLDG

Query:  YCIELCRIKPSN
        Y IE+CRIKPSN
Subjt:  YCIELCRIKPSN

XP_022942206.1 uncharacterized protein LOC111447330 [Cucurbita moschata]4.9e-0747.62Show/hide
Query:  IMTEEELEAYAREVDASENTNFEVVEIEKANLGGSSGIRLYITFKVKPSDTPAEHTTTTFQAKVIDGL---DGYCIELCRIKPS
        I   E ++ Y  E      TNFEVV+I KAN  G  G   YITF VKP  TP E  + TFQAKV   +   D   +ELCR KPS
Subjt:  IMTEEELEAYAREVDASENTNFEVVEIEKANLGGSSGIRLYITFKVKPSDTPAEHTTTTFQAKVIDGL---DGYCIELCRIKPS

XP_022975599.1 uncharacterized protein LOC111475178 [Cucurbita maxima]2.2e-0756.06Show/hide
Query:  TNFEVVEIEKANLGGSSGIRLYITFKVKPSDTPAEHTTTTFQAKVIDGL---DGYCIELCRIKPSN
        TNFEVV+I KAN  G  G   YITF VKP  T AE ++ TFQAKV   +   D   +ELCR KPSN
Subjt:  TNFEVVEIEKANLGGSSGIRLYITFKVKPSDTPAEHTTTTFQAKVIDGL---DGYCIELCRIKPSN

XP_022975633.1 uncharacterized protein LOC111475320 [Cucurbita maxima]6.4e-0750Show/hide
Query:  REVDASENTNFEVVEIEKANLGGSSGIRLYITFKVKPSDTPAEHTTTTFQAKVIDGL---DGYCIELCRIKPSN
        +  ++   TNFEVV+I KAN  G  G   YITF VKP  T AE  + TFQAKV   +   D   +ELCR KPSN
Subjt:  REVDASENTNFEVVEIEKANLGGSSGIRLYITFKVKPSDTPAEHTTTTFQAKVIDGL---DGYCIELCRIKPSN

TrEMBL top hitse value%identityAlignment
A0A6J1D850 uncharacterized protein LOC1110181531.9e-2054.46Show/hide
Query:  MTEEELEAYAREV-------------------------------DASENTNFEVVEIEKANLGGSSGIRLYITFKVKPSDTPAEHTTTTFQAKVIDGLDG
        MT+EELEAY RE+                               +   NTNFEVVEIEKAN+GGS GI LYITFKVKPS TPAE+ TTTFQA+V+D   G
Subjt:  MTEEELEAYAREV-------------------------------DASENTNFEVVEIEKANLGGSSGIRLYITFKVKPSDTPAEHTTTTFQAKVIDGLDG

Query:  YCIELCRIKPSN
        Y IE+CRIKPSN
Subjt:  YCIELCRIKPSN

A0A6J1FN74 uncharacterized protein LOC1114473302.4e-0747.62Show/hide
Query:  IMTEEELEAYAREVDASENTNFEVVEIEKANLGGSSGIRLYITFKVKPSDTPAEHTTTTFQAKVIDGL---DGYCIELCRIKPS
        I   E ++ Y  E      TNFEVV+I KAN  G  G   YITF VKP  TP E  + TFQAKV   +   D   +ELCR KPS
Subjt:  IMTEEELEAYAREVDASENTNFEVVEIEKANLGGSSGIRLYITFKVKPSDTPAEHTTTTFQAKVIDGL---DGYCIELCRIKPS

A0A6J1FPD6 UPF0725 protein At4g29550-like1.3e-0546.34Show/hide
Query:  IMTEEELEAYAREVDASENTNFEVVEIEKANLGGSSGIRLYITFKVKPSDTPAEHTTTTFQAKVIDGL---DGYCIELCRIK
        I   + ++ Y +E      TNFEVVEI KAN  G  G   YITF VKP  T AE +  TFQAKV   +   D   +ELCR K
Subjt:  IMTEEELEAYAREVDASENTNFEVVEIEKANLGGSSGIRLYITFKVKPSDTPAEHTTTTFQAKVIDGL---DGYCIELCRIK

A0A6J1IJT3 uncharacterized protein LOC1114753203.1e-0750Show/hide
Query:  REVDASENTNFEVVEIEKANLGGSSGIRLYITFKVKPSDTPAEHTTTTFQAKVIDGL---DGYCIELCRIKPSN
        +  ++   TNFEVV+I KAN  G  G   YITF VKP  T AE  + TFQAKV   +   D   +ELCR KPSN
Subjt:  REVDASENTNFEVVEIEKANLGGSSGIRLYITFKVKPSDTPAEHTTTTFQAKVIDGL---DGYCIELCRIKPSN

A0A6J1IL21 uncharacterized protein LOC1114751781.1e-0756.06Show/hide
Query:  TNFEVVEIEKANLGGSSGIRLYITFKVKPSDTPAEHTTTTFQAKVIDGL---DGYCIELCRIKPSN
        TNFEVV+I KAN  G  G   YITF VKP  T AE ++ TFQAKV   +   D   +ELCR KPSN
Subjt:  TNFEVVEIEKANLGGSSGIRLYITFKVKPSDTPAEHTTTTFQAKVIDGL---DGYCIELCRIKPSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCGATCATCTTCTTCCTCTGACCGCAGCATTAAACCAAAACCAAAACCAAAATCAAAATCAAAATGTACTCCACAACCTCCATATTATGGATTTATAGACATTAA
TGACCCTAATGATCCTATTATGACAGAGGAAGAGTTGGAGGCATACGCTCGTGAAGTTGATGCCAGCGAGAATACTAATTTTGAGGTTGTGGAGATTGAGAAGGCTAATC
TTGGAGGAAGTTCCGGCATTAGGTTGTACATCACCTTTAAAGTGAAACCTTCTGATACGCCTGCTGAACACACAACCACTACATTTCAGGCTAAAGTGATAGATGGTCTT
GATGGCTATTGCATAGAACTTTGCAGGATTAAGCCTTCAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCGATCATCTTCTTCCTCTGACCGCAGCATTAAACCAAAACCAAAACCAAAATCAAAATCAAAATGTACTCCACAACCTCCATATTATGGATTTATAGACATTAA
TGACCCTAATGATCCTATTATGACAGAGGAAGAGTTGGAGGCATACGCTCGTGAAGTTGATGCCAGCGAGAATACTAATTTTGAGGTTGTGGAGATTGAGAAGGCTAATC
TTGGAGGAAGTTCCGGCATTAGGTTGTACATCACCTTTAAAGTGAAACCTTCTGATACGCCTGCTGAACACACAACCACTACATTTCAGGCTAAAGTGATAGATGGTCTT
GATGGCTATTGCATAGAACTTTGCAGGATTAAGCCTTCAAATTAA
Protein sequenceShow/hide protein sequence
MERSSSSSDRSIKPKPKPKSKSKCTPQPPYYGFIDINDPNDPIMTEEELEAYAREVDASENTNFEVVEIEKANLGGSSGIRLYITFKVKPSDTPAEHTTTTFQAKVIDGL
DGYCIELCRIKPSN