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MS028347 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028347
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNADH-ubiquinone oxidoreductase chain, putative
Genome locationscaffold110:683247..683525
RNA-Seq ExpressionMS028347
SyntenyMS028347
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016042 - lipid catabolic process (biological process)
GO:0042773 - ATP synthesis coupled electron transport (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0019773 - proteasome core complex, alpha-subunit complex (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8540233.1 hypothetical protein F0562_024204 [Nyssa sinensis]2.5e-1679.37Show/hide
Query:  EAKDSKVQAKNTCIDSGLMTRADDVSLGRSRMMRKSHVRFPEKGVATTYW---RPRPVDSMFG
        EAKDS+VQA+NTCIDSGLMTRADD S GRSRMMRKSHVRFPEKGVA TYW   +P PV+S  G
Subjt:  EAKDSKVQAKNTCIDSGLMTRADDVSLGRSRMMRKSHVRFPEKGVATTYW---RPRPVDSMFG

KJB09790.1 hypothetical protein B456_001G166300 [Gossypium raimondii]6.4e-1285.11Show/hide
Query:  AALFATIREAKDSKVQAKNTCIDSGLMTRADDVSLGRSRMMRKSHVR
        AALFAT R+AKDS+VQA+NTCIDSGLMTRADD S GRSRMMRKSH+R
Subjt:  AALFATIREAKDSKVQAKNTCIDSGLMTRADDVSLGRSRMMRKSHVR

PUZ51113.1 hypothetical protein GQ55_6G149400 [Panicum hallii var. hallii]3.1e-0670.21Show/hide
Query:  SGLMTRADDVSLGRSRMMRKSHVRFPEKGVAT--TYWRPRPVDSMFG
        SGLM RADD S GRSRMMRKSHVRFPEKGVAT  ++ +P PV+   G
Subjt:  SGLMTRADDVSLGRSRMMRKSHVRFPEKGVAT--TYWRPRPVDSMFG

RDY13472.1 NADH-ubiquinone oxidoreductase chain 4, partial [Mucuna pruriens]4.5e-0590.62Show/hide
Query:  MTRADDVSLGRSRMMRKSHVRFPEKGVATTYW
        MTRADD S GRSRMMRKSHVRFPEKGVA TYW
Subjt:  MTRADDVSLGRSRMMRKSHVRFPEKGVATTYW

TYJ49584.1 hypothetical protein E1A91_A01G143900v1 [Gossypium mustelinum]6.4e-1285.11Show/hide
Query:  AALFATIREAKDSKVQAKNTCIDSGLMTRADDVSLGRSRMMRKSHVR
        AALFAT R+AKDS+VQA+NTCIDSGLMTRADD S GRSRMMRKSH+R
Subjt:  AALFATIREAKDSKVQAKNTCIDSGLMTRADDVSLGRSRMMRKSHVR

TrEMBL top hitse value%identityAlignment
A0A0D2QRC7 Proton_antipo_M domain-containing protein3.1e-1285.11Show/hide
Query:  AALFATIREAKDSKVQAKNTCIDSGLMTRADDVSLGRSRMMRKSHVR
        AALFAT R+AKDS+VQA+NTCIDSGLMTRADD S GRSRMMRKSH+R
Subjt:  AALFATIREAKDSKVQAKNTCIDSGLMTRADDVSLGRSRMMRKSHVR

A0A2T7D6B5 Uncharacterized protein1.5e-0670.21Show/hide
Query:  SGLMTRADDVSLGRSRMMRKSHVRFPEKGVAT--TYWRPRPVDSMFG
        SGLM RADD S GRSRMMRKSHVRFPEKGVAT  ++ +P PV+   G
Subjt:  SGLMTRADDVSLGRSRMMRKSHVRFPEKGVAT--TYWRPRPVDSMFG

A0A371IEJ1 NADH-ubiquinone oxidoreductase chain 4 (Fragment)2.2e-0590.62Show/hide
Query:  MTRADDVSLGRSRMMRKSHVRFPEKGVATTYW
        MTRADD S GRSRMMRKSHVRFPEKGVA TYW
Subjt:  MTRADDVSLGRSRMMRKSHVRFPEKGVATTYW

A0A5D3AF22 Proton_antipo_M domain-containing protein3.1e-1285.11Show/hide
Query:  AALFATIREAKDSKVQAKNTCIDSGLMTRADDVSLGRSRMMRKSHVR
        AALFAT R+AKDS+VQA+NTCIDSGLMTRADD S GRSRMMRKSH+R
Subjt:  AALFATIREAKDSKVQAKNTCIDSGLMTRADDVSLGRSRMMRKSHVR

A0A5J5BAP4 PROTEASOME_ALPHA_1 domain-containing protein1.2e-1679.37Show/hide
Query:  EAKDSKVQAKNTCIDSGLMTRADDVSLGRSRMMRKSHVRFPEKGVATTYW---RPRPVDSMFG
        EAKDS+VQA+NTCIDSGLMTRADD S GRSRMMRKSHVRFPEKGVA TYW   +P PV+S  G
Subjt:  EAKDSKVQAKNTCIDSGLMTRADDVSLGRSRMMRKSHVRFPEKGVATTYW---RPRPVDSMFG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACTACCGAAGAATAGACCTGATAGAATCAATCGATTGCATAAGATATGCTGCATTGTTCGCCACTATCCGAGAAGCAAAAGATTCGAAAGTCCAGGCTAAAAATAC
ATGCATAGATAGTGGTCTAATGACAAGGGCCGACGACGTAAGCTTGGGACGGAGCCGTATGATGCGGAAGTCTCACGTACGGTTCCCTGAGAAGGGAGTGGCTACTACCT
ACTGGAGACCCCGTCCAGTAGACTCCATGTTTGGCTCATCCCCTTCATCAGCTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCACTACCGAAGAATAGACCTGATAGAATCAATCGATTGCATAAGATATGCTGCATTGTTCGCCACTATCCGAGAAGCAAAAGATTCGAAAGTCCAGGCTAAAAATAC
ATGCATAGATAGTGGTCTAATGACAAGGGCCGACGACGTAAGCTTGGGACGGAGCCGTATGATGCGGAAGTCTCACGTACGGTTCCCTGAGAAGGGAGTGGCTACTACCT
ACTGGAGACCCCGTCCAGTAGACTCCATGTTTGGCTCATCCCCTTCATCAGCTCTTTGA
Protein sequenceShow/hide protein sequence
MHYRRIDLIESIDCIRYAALFATIREAKDSKVQAKNTCIDSGLMTRADDVSLGRSRMMRKSHVRFPEKGVATTYWRPRPVDSMFGSSPSSAL