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MS028362 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028362
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSET domain-containing protein
Genome locationscaffold720:209418..211158
RNA-Seq ExpressionMS028362
SyntenyMS028362
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134518.1 uncharacterized protein LOC101221511 [Cucumis sativus]3.1e-3878.69Show/hide
Query:  MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTDVAPASTSTTSHAPMAMDVELDDPSQSMKLKPVGGIGKKSG
        MAKSMRSKREKRLRAIRREMV+PFYD K+AAKLAAQ+AALAAPKLPVR SP TS+ ST DVAP STS+ + A  AMDV++DD S+S  LKPVGG+GKKS 
Subjt:  MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTDVAPASTSTTSHAPMAMDVELDDPSQSMKLKPVGGIGKKSG

Query:  RKFKVGKAKRRGKCRIKRNRHI
        RKFKVGKAKRRGKC++KRNRHI
Subjt:  RKFKVGKAKRRGKCRIKRNRHI

XP_008439430.1 PREDICTED: uncharacterized protein LOC103484241 [Cucumis melo]1.8e-3879.51Show/hide
Query:  MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTDVAPASTSTTSHAPMAMDVELDDPSQSMKLKPVGGIGKKSG
        MAKSMRSKREKRLRAIRREMV+PFYD K+AAKLAAQ+AALAAPKLPVR SPFTS+ ST DVA ASTS+   A  AMDV++DD S+S  LKPVGG+GKKS 
Subjt:  MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTDVAPASTSTTSHAPMAMDVELDDPSQSMKLKPVGGIGKKSG

Query:  RKFKVGKAKRRGKCRIKRNRHI
        RKFKVGKAKRRGKC++KRNRHI
Subjt:  RKFKVGKAKRRGKCRIKRNRHI

XP_022146541.1 uncharacterized protein LOC111015735 [Momordica charantia]1.1e-5499.18Show/hide
Query:  MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTDVAPASTSTTSHAPMAMDVELDDPSQSMKLKPVGGIGKKSG
        MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTDVAPASTSTTSHAPMAMDVELDDPSQSMK+KPVGGIGKKSG
Subjt:  MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTDVAPASTSTTSHAPMAMDVELDDPSQSMKLKPVGGIGKKSG

Query:  RKFKVGKAKRRGKCRIKRNRHI
        RKFKVGKAKRRGKCRIKRNRHI
Subjt:  RKFKVGKAKRRGKCRIKRNRHI

XP_022926965.1 uncharacterized protein LOC111433923 [Cucurbita moschata]2.4e-3882.93Show/hide
Query:  MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTDVAPASTSTTSHAPMAMDVELDDPSQS-MKLKPVGGIGKKS
        MAKSMRSKREKRLRAIRREMVEP YD KDAAKLAAQQAALAAPKLPVRPSPFT + ST DVAPASTST + A  AM+VE+DD S+S M LK VGGIGKKS
Subjt:  MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTDVAPASTSTTSHAPMAMDVELDDPSQS-MKLKPVGGIGKKS

Query:  GRKFKVGKAKRRGKCRIKRNRHI
         +KFKVGKAKRRGKC+IKRNRHI
Subjt:  GRKFKVGKAKRRGKCRIKRNRHI

XP_038877484.1 uncharacterized protein LOC120069761 [Benincasa hispida]3.3e-4083.61Show/hide
Query:  MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTDVAPASTSTTSHAPMAMDVELDDPSQSMKLKPVGGIGKKSG
        MAKSMRSKREKRLRAIRREMV+PFYD KDAAKLAAQ+AALAAPKLPVR SPFTS+ ST DVA ASTST   A  AMDVE+DD S+S  LKPVGGIGKKS 
Subjt:  MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTDVAPASTSTTSHAPMAMDVELDDPSQSMKLKPVGGIGKKSG

Query:  RKFKVGKAKRRGKCRIKRNRHI
        RKFKVGKAKRRGKC+IKRNRHI
Subjt:  RKFKVGKAKRRGKCRIKRNRHI

TrEMBL top hitse value%identityAlignment
A0A1S3AZE5 uncharacterized protein LOC1034842418.8e-3979.51Show/hide
Query:  MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTDVAPASTSTTSHAPMAMDVELDDPSQSMKLKPVGGIGKKSG
        MAKSMRSKREKRLRAIRREMV+PFYD K+AAKLAAQ+AALAAPKLPVR SPFTS+ ST DVA ASTS+   A  AMDV++DD S+S  LKPVGG+GKKS 
Subjt:  MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTDVAPASTSTTSHAPMAMDVELDDPSQSMKLKPVGGIGKKSG

Query:  RKFKVGKAKRRGKCRIKRNRHI
        RKFKVGKAKRRGKC++KRNRHI
Subjt:  RKFKVGKAKRRGKCRIKRNRHI

A0A5A7UG11 Uncharacterized protein8.8e-3979.51Show/hide
Query:  MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTDVAPASTSTTSHAPMAMDVELDDPSQSMKLKPVGGIGKKSG
        MAKSMRSKREKRLRAIRREMV+PFYD K+AAKLAAQ+AALAAPKLPVR SPFTS+ ST DVA ASTS+   A  AMDV++DD S+S  LKPVGG+GKKS 
Subjt:  MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTDVAPASTSTTSHAPMAMDVELDDPSQSMKLKPVGGIGKKSG

Query:  RKFKVGKAKRRGKCRIKRNRHI
        RKFKVGKAKRRGKC++KRNRHI
Subjt:  RKFKVGKAKRRGKCRIKRNRHI

A0A6J1CZN9 uncharacterized protein LOC1110157355.2e-5599.18Show/hide
Query:  MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTDVAPASTSTTSHAPMAMDVELDDPSQSMKLKPVGGIGKKSG
        MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTDVAPASTSTTSHAPMAMDVELDDPSQSMK+KPVGGIGKKSG
Subjt:  MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTDVAPASTSTTSHAPMAMDVELDDPSQSMKLKPVGGIGKKSG

Query:  RKFKVGKAKRRGKCRIKRNRHI
        RKFKVGKAKRRGKCRIKRNRHI
Subjt:  RKFKVGKAKRRGKCRIKRNRHI

A0A6J1EMJ6 uncharacterized protein LOC1114339231.2e-3882.93Show/hide
Query:  MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTDVAPASTSTTSHAPMAMDVELDDPSQS-MKLKPVGGIGKKS
        MAKSMRSKREKRLRAIRREMVEP YD KDAAKLAAQQAALAAPKLPVRPSPFT + ST DVAPASTST + A  AM+VE+DD S+S M LK VGGIGKKS
Subjt:  MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTDVAPASTSTTSHAPMAMDVELDDPSQS-MKLKPVGGIGKKS

Query:  GRKFKVGKAKRRGKCRIKRNRHI
         +KFKVGKAKRRGKC+IKRNRHI
Subjt:  GRKFKVGKAKRRGKCRIKRNRHI

A0A6J1KND1 uncharacterized protein LOC1114972201.2e-3882.93Show/hide
Query:  MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTDVAPASTSTTSHAPMAMDVELDDPSQS-MKLKPVGGIGKKS
        MAKSMRSKREKRLRAIRREMVEP YD KDAAKLAAQQAALAAPKLPVRPSPFT + ST DVAPASTST + A  AM+VE+DD S+S M LK VGGIGKKS
Subjt:  MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTDVAPASTSTTSHAPMAMDVELDDPSQS-MKLKPVGGIGKKS

Query:  GRKFKVGKAKRRGKCRIKRNRHI
         +KFKVGKAKRRGKC+IKRNRHI
Subjt:  GRKFKVGKAKRRGKCRIKRNRHI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30880.1 unknown protein1.7e-1348.78Show/hide
Query:  MAKSMRSKREKRLRAIRREMV--EPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTDVAPASTSTTSHAPMAMDVELDDPSQSMKLKPVGGIGKK
        MAKSMR KR KRLRAIRRE+V  E F   ++ AK AA +AALAAPKLPVR +P +        +  S S ++      D E+DD  ++  LKP   IGKK
Subjt:  MAKSMRSKREKRLRAIRREMV--EPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTDVAPASTSTTSHAPMAMDVELDDPSQSMKLKPVGGIGKK

Query:  SGRKFKVGKAKRRGK--CRIKRN
          +KFK+G   RR K   R KRN
Subjt:  SGRKFKVGKAKRRGK--CRIKRN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGTCCATGAGATCCAAGAGAGAGAAGAGGCTGAGAGCTATCAGGAGAGAGATGGTTGAACCCTTCTACGACAATAAAGACGCTGCCAAGCTCGCTGCTCAACA
GGCTGCTCTTGCTGCACCTAAGCTTCCTGTGCGTCCCTCTCCTTTCACCTCCGATGCCTCTACCACCGACGTTGCGCCAGCATCTACTTCCACCACTTCCCACGCTCCTA
TGGCTATGGATGTGGAGTTGGATGATCCCAGTCAAAGCATGAAGCTGAAGCCTGTTGGTGGAATTGGAAAGAAATCCGGAAGAAAATTCAAGGTTGGTAAGGCCAAGCGC
CGGGGTAAGTGCAGGATCAAGAGGAACCGCCACATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGTCCATGAGATCCAAGAGAGAGAAGAGGCTGAGAGCTATCAGGAGAGAGATGGTTGAACCCTTCTACGACAATAAAGACGCTGCCAAGCTCGCTGCTCAACA
GGCTGCTCTTGCTGCACCTAAGCTTCCTGTGCGTCCCTCTCCTTTCACCTCCGATGCCTCTACCACCGACGTTGCGCCAGCATCTACTTCCACCACTTCCCACGCTCCTA
TGGCTATGGATGTGGAGTTGGATGATCCCAGTCAAAGCATGAAGCTGAAGCCTGTTGGTGGAATTGGAAAGAAATCCGGAAGAAAATTCAAGGTTGGTAAGGCCAAGCGC
CGGGGTAAGTGCAGGATCAAGAGGAACCGCCACATTTAA
Protein sequenceShow/hide protein sequence
MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTDVAPASTSTTSHAPMAMDVELDDPSQSMKLKPVGGIGKKSGRKFKVGKAKR
RGKCRIKRNRHI