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MS028366 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028366
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold720:352564..352893
RNA-Seq ExpressionMS028366
SyntenyMS028366
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8656285.1 hypothetical protein HU200_060760 [Digitaria exilis]1.0e-0332.18Show/hide
Query:  TQATKHELLGIWSKYQLLD-YVLMCLSVENERIDTRPPRWVSFYPLMFWNGDRLSLYLFTQSFMSHAGVAPTQLAPNTWRTIMALAI
        T  T+  L G+ ++Y + + + L+         D  P   +  Y   F  G RL L+ F    ++H G+AP+QLAPN WR ++A A+
Subjt:  TQATKHELLGIWSKYQLLD-YVLMCLSVENERIDTRPPRWVSFYPLMFWNGDRLSLYLFTQSFMSHAGVAPTQLAPNTWRTIMALAI

KAF8656914.1 hypothetical protein HU200_060477 [Digitaria exilis]1.0e-0332.18Show/hide
Query:  TQATKHELLGIWSKYQLLD-YVLMCLSVENERIDTRPPRWVSFYPLMFWNGDRLSLYLFTQSFMSHAGVAPTQLAPNTWRTIMALAI
        T  T+  L G+ ++Y + + + L+         D  P   +  Y   F  G RL L+ F    ++H G+AP+QLAPN WR ++A A+
Subjt:  TQATKHELLGIWSKYQLLD-YVLMCLSVENERIDTRPPRWVSFYPLMFWNGDRLSLYLFTQSFMSHAGVAPTQLAPNTWRTIMALAI

PON66432.1 hypothetical protein TorRG33x02_267800 [Trema orientale]7.6e-0430.93Show/hide
Query:  MANHPTVTHVPTQATKHELLGIWSKYQLLDYVLMCLSVENERIDTRPPRWVSFYPLMFWNGDRLSLYLFTQSFMSHAGVAPTQLAPNTWRTIMALAI
        +  +P  T  PT     EL+   S Y++ D V +    + ER+D+  P W+  Y   F  G RL L    + + +   + P+QL PNTWR ++A+ +
Subjt:  MANHPTVTHVPTQATKHELLGIWSKYQLLDYVLMCLSVENERIDTRPPRWVSFYPLMFWNGDRLSLYLFTQSFMSHAGVAPTQLAPNTWRTIMALAI

XP_022159063.1 uncharacterized protein LOC111025502, partial [Momordica charantia]2.3e-0840.23Show/hide
Query:  PTQATKHELLGIWSKYQLLDYVLMCLSVENERIDTRPPRWVSFYPLMFWNGDRLSLYLFTQSFMSHAGVAPTQLAPNTWRTIMALAI
        P++  +H L  +   + + + +L+ L  E ER D  P  WV+ Y  MF  G RL L+ F Q F+   G+AP Q+APN W  I ALAI
Subjt:  PTQATKHELLGIWSKYQLLDYVLMCLSVENERIDTRPPRWVSFYPLMFWNGDRLSLYLFTQSFMSHAGVAPTQLAPNTWRTIMALAI

XP_030479153.1 uncharacterized protein LOC115696392 [Cannabis sativa]4.5e-0431.33Show/hide
Query:  TKHELLGIWSKYQLLDYVLMCLSVENERIDTRPPRWVSFYPLMFWNGDRLSLYLFTQSFMSHAGVAPTQLAPNTWRTIMALAI
        T ++L  I  +Y +  ++ +      ER D + P W   Y L F  G R  L        S+ G++P+QL PN WR +MA+ +
Subjt:  TKHELLGIWSKYQLLDYVLMCLSVENERIDTRPPRWVSFYPLMFWNGDRLSLYLFTQSFMSHAGVAPTQLAPNTWRTIMALAI

TrEMBL top hitse value%identityAlignment
A0A2P5CZF5 Uncharacterized protein3.7e-0430.93Show/hide
Query:  MANHPTVTHVPTQATKHELLGIWSKYQLLDYVLMCLSVENERIDTRPPRWVSFYPLMFWNGDRLSLYLFTQSFMSHAGVAPTQLAPNTWRTIMALAI
        +  +P  T  PT     EL+   S Y++ D V +    + ER+D+  P W+  Y   F  G RL L    + + +   + P+QL PNTWR ++A+ +
Subjt:  MANHPTVTHVPTQATKHELLGIWSKYQLLDYVLMCLSVENERIDTRPPRWVSFYPLMFWNGDRLSLYLFTQSFMSHAGVAPTQLAPNTWRTIMALAI

A0A6J1DXS5 uncharacterized protein LOC1110255021.1e-0840.23Show/hide
Query:  PTQATKHELLGIWSKYQLLDYVLMCLSVENERIDTRPPRWVSFYPLMFWNGDRLSLYLFTQSFMSHAGVAPTQLAPNTWRTIMALAI
        P++  +H L  +   + + + +L+ L  E ER D  P  WV+ Y  MF  G RL L+ F Q F+   G+AP Q+APN W  I ALAI
Subjt:  PTQATKHELLGIWSKYQLLDYVLMCLSVENERIDTRPPRWVSFYPLMFWNGDRLSLYLFTQSFMSHAGVAPTQLAPNTWRTIMALAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAACCATCCGACGGTTACTCATGTCCCGACTCAAGCAACGAAACATGAACTCTTAGGTATTTGGTCCAAGTACCAGTTGCTGGATTACGTTCTCATGTGCCTCTC
GGTGGAGAATGAAAGGATCGACACTCGACCCCCGAGATGGGTGAGTTTTTACCCCCTGATGTTTTGGAATGGAGATCGGCTCTCGCTTTATCTTTTCACCCAGTCTTTTA
TGTCCCACGCTGGAGTCGCGCCGACACAACTCGCCCCCAACACATGGAGAACTATAATGGCGCTAGCCATTCCCTTGCTGGAGCTTGGTAATGGCGAAGGGATCAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAACCATCCGACGGTTACTCATGTCCCGACTCAAGCAACGAAACATGAACTCTTAGGTATTTGGTCCAAGTACCAGTTGCTGGATTACGTTCTCATGTGCCTCTC
GGTGGAGAATGAAAGGATCGACACTCGACCCCCGAGATGGGTGAGTTTTTACCCCCTGATGTTTTGGAATGGAGATCGGCTCTCGCTTTATCTTTTCACCCAGTCTTTTA
TGTCCCACGCTGGAGTCGCGCCGACACAACTCGCCCCCAACACATGGAGAACTATAATGGCGCTAGCCATTCCCTTGCTGGAGCTTGGTAATGGCGAAGGGATCAGATGA
Protein sequenceShow/hide protein sequence
MANHPTVTHVPTQATKHELLGIWSKYQLLDYVLMCLSVENERIDTRPPRWVSFYPLMFWNGDRLSLYLFTQSFMSHAGVAPTQLAPNTWRTIMALAIPLLELGNGEGIR