; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS028444 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028444
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionnuclear pore complex protein NUP155
Genome locationscaffold1354:184294..187305
RNA-Seq ExpressionMS028444
SyntenyMS028444
Gene Ontology termsGO:0006913 - nucleocytoplasmic transport (biological process)
GO:0005643 - nuclear pore (cellular component)
GO:0017056 - structural constituent of nuclear pore (molecular function)
InterPro domainsIPR004870 - Nucleoporin, Nup155-like
IPR014908 - Nucleoporin, Nup133/Nup155-like, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040978.1 nuclear pore complex protein NUP155 [Cucumis melo var. makuwa]2.2e-9365.58Show/hide
Query:  KVSLSPLSQ--IWNDGEREPPFPCT-------------VARERRRSPSLSSRRCKRHGMTTDGESAPTTTAGG---GWVVPNVFNFGAVDPIVEMIYDSE
        ++SL PLS+  I +DG       CT             +      S S   +RC++  +T+          GG    WVVPNVF FGAVDPIVEMIYDSE
Subjt:  KVSLSPLSQ--IWNDGEREPPFPCT-------------VARERRRSPSLSSRRCKRHGMTTDGESAPTTTAGG---GWVVPNVFNFGAVDPIVEMIYDSE

Query:  RCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISLLSTLESKSLHLLAVLSDGRRMYLTTSPSNGNLG
        RCILY RTEEMKVQVFVLG NGDGPLKKVAEERNL+NQRNGSYG RQ+KGPRA+++SA PSIVCISLLSTLESKSLHLLAVLSDGRRMYLTTS SNGNLG
Subjt:  RCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISLLSTLESKSLHLLAVLSDGRRMYLTTSPSNGNLG

Query:  AYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEE----------KGLTFVLSDSSPPTVSSLLLVSRDPVAQSSISGTS----QNTFDYQ
        AY+SSHQ PSCLKVVATRPSPPLGVGGGLTFGANS+SGRP NEE             T VLSDSSPPT+SSLLLVS+DPVAQSSISGTS    + +F  +
Subjt:  AYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEE----------KGLTFVLSDSSPPTVSSLLLVSRDPVAQSSISGTS----QNTFDYQ

Query:  KLYSILPI
        ++ S LP+
Subjt:  KLYSILPI

TYK20328.1 nuclear pore complex protein NUP155 [Cucumis melo var. makuwa]2.2e-9365.58Show/hide
Query:  KVSLSPLSQ--IWNDGEREPPFPCT-------------VARERRRSPSLSSRRCKRHGMTTDGESAPTTTAGG---GWVVPNVFNFGAVDPIVEMIYDSE
        ++SL PLS+  I +DG       CT             +      S S   +RC++  +T+          GG    WVVPNVF FGAVDPIVEMIYDSE
Subjt:  KVSLSPLSQ--IWNDGEREPPFPCT-------------VARERRRSPSLSSRRCKRHGMTTDGESAPTTTAGG---GWVVPNVFNFGAVDPIVEMIYDSE

Query:  RCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISLLSTLESKSLHLLAVLSDGRRMYLTTSPSNGNLG
        RCILY RTEEMKVQVFVLG NGDGPLKKVAEERNL+NQRNGSYG RQ+KGPRA+++SA PSIVCISLLSTLESKSLHLLAVLSDGRRMYLTTS SNGNLG
Subjt:  RCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISLLSTLESKSLHLLAVLSDGRRMYLTTSPSNGNLG

Query:  AYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEE----------KGLTFVLSDSSPPTVSSLLLVSRDPVAQSSISGTS----QNTFDYQ
        AY+SSHQ PSCLKVVATRPSPPLGVGGGLTFGANS+SGRP NEE             T VLSDSSPPT+SSLLLVS+DPVAQSSISGTS    + +F  +
Subjt:  AYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEE----------KGLTFVLSDSSPPTVSSLLLVSRDPVAQSSISGTS----QNTFDYQ

Query:  KLYSILPI
        ++ S LP+
Subjt:  KLYSILPI

XP_008464720.1 PREDICTED: nuclear pore complex protein NUP155 [Cucumis melo]2.2e-9365.58Show/hide
Query:  KVSLSPLSQ--IWNDGEREPPFPCT-------------VARERRRSPSLSSRRCKRHGMTTDGESAPTTTAGG---GWVVPNVFNFGAVDPIVEMIYDSE
        ++SL PLS+  I +DG       CT             +      S S   +RC++  +T+          GG    WVVPNVF FGAVDPIVEMIYDSE
Subjt:  KVSLSPLSQ--IWNDGEREPPFPCT-------------VARERRRSPSLSSRRCKRHGMTTDGESAPTTTAGG---GWVVPNVFNFGAVDPIVEMIYDSE

Query:  RCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISLLSTLESKSLHLLAVLSDGRRMYLTTSPSNGNLG
        RCILY RTEEMKVQVFVLG NGDGPLKKVAEERNL+NQRNGSYG RQ+KGPRA+++SA PSIVCISLLSTLESKSLHLLAVLSDGRRMYLTTS SNGNLG
Subjt:  RCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISLLSTLESKSLHLLAVLSDGRRMYLTTSPSNGNLG

Query:  AYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEE----------KGLTFVLSDSSPPTVSSLLLVSRDPVAQSSISGTS----QNTFDYQ
        AY+SSHQ PSCLKVVATRPSPPLGVGGGLTFGANS+SGRP NEE             T VLSDSSPPT+SSLLLVS+DPVAQSSISGTS    + +F  +
Subjt:  AYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEE----------KGLTFVLSDSSPPTVSSLLLVSRDPVAQSSISGTS----QNTFDYQ

Query:  KLYSILPI
        ++ S LP+
Subjt:  KLYSILPI

XP_022157766.1 nuclear pore complex protein NUP155 [Momordica charantia]3.7e-10186.15Show/hide
Query:  WVVPNVFNFGAVDPIVEMIYDSERCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISLLSTLESKSLH
        WVVPNVFNFGAVDPIVEMIYDSERCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISLLSTLESKSLH
Subjt:  WVVPNVFNFGAVDPIVEMIYDSERCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISLLSTLESKSLH

Query:  LLAVLSDGRRMYLTTSPSNGNLGAYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEE----------KGLTFVLSDSSPPTVSSLLLVSR
        LLAVLSDGRRMYLTTSPSNGNLGAYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANS+SGRP NEE             T VLSDSSPPTVSSLLLVS+
Subjt:  LLAVLSDGRRMYLTTSPSNGNLGAYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEE----------KGLTFVLSDSSPPTVSSLLLVSR

Query:  DPVAQSSISGTS----QNTFDYQKLYSILPI
        DPVAQSSISGTS    + +F  +++ S LP+
Subjt:  DPVAQSSISGTS----QNTFDYQKLYSILPI

XP_038892008.1 nuclear pore complex protein NUP155 isoform X1 [Benincasa hispida]2.2e-9379.65Show/hide
Query:  WVVPNVFNFGAVDPIVEMIYDSERCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISLLSTLESKSLH
        WVVPNVF FGAVDPIVEMIYD ERCILY RTEEMKVQVFVLG NGDGPLKKVAEERNL+NQRNGSYG RQ+KGPRA+++S  PSIVCISLLSTLESKSLH
Subjt:  WVVPNVFNFGAVDPIVEMIYDSERCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISLLSTLESKSLH

Query:  LLAVLSDGRRMYLTTSPSNGNLGAYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEE----------KGLTFVLSDSSPPTVSSLLLVSR
        LLAVLSDGRRMYLTTSPSNGNLGAY+SSHQ PSCLKVVATRPSPPLGVGGGLTFGANSVSGRP NEE             T VLSDSSPPT+SSLLLVS+
Subjt:  LLAVLSDGRRMYLTTSPSNGNLGAYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEE----------KGLTFVLSDSSPPTVSSLLLVSR

Query:  DPVAQSSISGTS----QNTFDYQKLYSILPI
        DPVAQSS+SGTS    + +F  +++ S LP+
Subjt:  DPVAQSSISGTS----QNTFDYQKLYSILPI

TrEMBL top hitse value%identityAlignment
A0A1S3CM39 nuclear pore complex protein NUP1551.1e-9365.58Show/hide
Query:  KVSLSPLSQ--IWNDGEREPPFPCT-------------VARERRRSPSLSSRRCKRHGMTTDGESAPTTTAGG---GWVVPNVFNFGAVDPIVEMIYDSE
        ++SL PLS+  I +DG       CT             +      S S   +RC++  +T+          GG    WVVPNVF FGAVDPIVEMIYDSE
Subjt:  KVSLSPLSQ--IWNDGEREPPFPCT-------------VARERRRSPSLSSRRCKRHGMTTDGESAPTTTAGG---GWVVPNVFNFGAVDPIVEMIYDSE

Query:  RCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISLLSTLESKSLHLLAVLSDGRRMYLTTSPSNGNLG
        RCILY RTEEMKVQVFVLG NGDGPLKKVAEERNL+NQRNGSYG RQ+KGPRA+++SA PSIVCISLLSTLESKSLHLLAVLSDGRRMYLTTS SNGNLG
Subjt:  RCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISLLSTLESKSLHLLAVLSDGRRMYLTTSPSNGNLG

Query:  AYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEE----------KGLTFVLSDSSPPTVSSLLLVSRDPVAQSSISGTS----QNTFDYQ
        AY+SSHQ PSCLKVVATRPSPPLGVGGGLTFGANS+SGRP NEE             T VLSDSSPPT+SSLLLVS+DPVAQSSISGTS    + +F  +
Subjt:  AYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEE----------KGLTFVLSDSSPPTVSSLLLVSRDPVAQSSISGTS----QNTFDYQ

Query:  KLYSILPI
        ++ S LP+
Subjt:  KLYSILPI

A0A5A7TDD9 Nuclear pore complex protein NUP1551.1e-9365.58Show/hide
Query:  KVSLSPLSQ--IWNDGEREPPFPCT-------------VARERRRSPSLSSRRCKRHGMTTDGESAPTTTAGG---GWVVPNVFNFGAVDPIVEMIYDSE
        ++SL PLS+  I +DG       CT             +      S S   +RC++  +T+          GG    WVVPNVF FGAVDPIVEMIYDSE
Subjt:  KVSLSPLSQ--IWNDGEREPPFPCT-------------VARERRRSPSLSSRRCKRHGMTTDGESAPTTTAGG---GWVVPNVFNFGAVDPIVEMIYDSE

Query:  RCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISLLSTLESKSLHLLAVLSDGRRMYLTTSPSNGNLG
        RCILY RTEEMKVQVFVLG NGDGPLKKVAEERNL+NQRNGSYG RQ+KGPRA+++SA PSIVCISLLSTLESKSLHLLAVLSDGRRMYLTTS SNGNLG
Subjt:  RCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISLLSTLESKSLHLLAVLSDGRRMYLTTSPSNGNLG

Query:  AYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEE----------KGLTFVLSDSSPPTVSSLLLVSRDPVAQSSISGTS----QNTFDYQ
        AY+SSHQ PSCLKVVATRPSPPLGVGGGLTFGANS+SGRP NEE             T VLSDSSPPT+SSLLLVS+DPVAQSSISGTS    + +F  +
Subjt:  AYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEE----------KGLTFVLSDSSPPTVSSLLLVSRDPVAQSSISGTS----QNTFDYQ

Query:  KLYSILPI
        ++ S LP+
Subjt:  KLYSILPI

A0A5D3D9Z9 Nuclear pore complex protein NUP1551.1e-9365.58Show/hide
Query:  KVSLSPLSQ--IWNDGEREPPFPCT-------------VARERRRSPSLSSRRCKRHGMTTDGESAPTTTAGG---GWVVPNVFNFGAVDPIVEMIYDSE
        ++SL PLS+  I +DG       CT             +      S S   +RC++  +T+          GG    WVVPNVF FGAVDPIVEMIYDSE
Subjt:  KVSLSPLSQ--IWNDGEREPPFPCT-------------VARERRRSPSLSSRRCKRHGMTTDGESAPTTTAGG---GWVVPNVFNFGAVDPIVEMIYDSE

Query:  RCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISLLSTLESKSLHLLAVLSDGRRMYLTTSPSNGNLG
        RCILY RTEEMKVQVFVLG NGDGPLKKVAEERNL+NQRNGSYG RQ+KGPRA+++SA PSIVCISLLSTLESKSLHLLAVLSDGRRMYLTTS SNGNLG
Subjt:  RCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISLLSTLESKSLHLLAVLSDGRRMYLTTSPSNGNLG

Query:  AYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEE----------KGLTFVLSDSSPPTVSSLLLVSRDPVAQSSISGTS----QNTFDYQ
        AY+SSHQ PSCLKVVATRPSPPLGVGGGLTFGANS+SGRP NEE             T VLSDSSPPT+SSLLLVS+DPVAQSSISGTS    + +F  +
Subjt:  AYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEE----------KGLTFVLSDSSPPTVSSLLLVSRDPVAQSSISGTS----QNTFDYQ

Query:  KLYSILPI
        ++ S LP+
Subjt:  KLYSILPI

A0A6J1DZ63 nuclear pore complex protein NUP1551.8e-10186.15Show/hide
Query:  WVVPNVFNFGAVDPIVEMIYDSERCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISLLSTLESKSLH
        WVVPNVFNFGAVDPIVEMIYDSERCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISLLSTLESKSLH
Subjt:  WVVPNVFNFGAVDPIVEMIYDSERCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISLLSTLESKSLH

Query:  LLAVLSDGRRMYLTTSPSNGNLGAYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEE----------KGLTFVLSDSSPPTVSSLLLVSR
        LLAVLSDGRRMYLTTSPSNGNLGAYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANS+SGRP NEE             T VLSDSSPPTVSSLLLVS+
Subjt:  LLAVLSDGRRMYLTTSPSNGNLGAYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEE----------KGLTFVLSDSSPPTVSSLLLVSR

Query:  DPVAQSSISGTS----QNTFDYQKLYSILPI
        DPVAQSSISGTS    + +F  +++ S LP+
Subjt:  DPVAQSSISGTS----QNTFDYQKLYSILPI

A0A6J1FPZ9 nuclear pore complex protein NUP1553.1e-9379.22Show/hide
Query:  WVVPNVFNFGAVDPIVEMIYDSERCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISLLSTLESKSLH
        WVVPNVF FGAVDPIVEMIYDSERCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNL+NQRNG YG RQ+KGPR +N+S  PSIVC+SLLST+ESKSLH
Subjt:  WVVPNVFNFGAVDPIVEMIYDSERCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISLLSTLESKSLH

Query:  LLAVLSDGRRMYLTTSPSNGNLGAYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEE----------KGLTFVLSDSSPPTVSSLLLVSR
        LLAVLSDGRRMYLTTSPSNGNLGAY+SSHQ PSCLKVVATRPSPPLGVGGGLTFGANSVSGRP NEE               VLSDSSPPTVSSLLLVS+
Subjt:  LLAVLSDGRRMYLTTSPSNGNLGAYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEE----------KGLTFVLSDSSPPTVSSLLLVSR

Query:  DPVAQSSISGTS----QNTFDYQKLYSILPI
        DP AQSS+SGTS    + +F  ++  S LP+
Subjt:  DPVAQSSISGTS----QNTFDYQKLYSILPI

SwissProt top hitse value%identityAlignment
F4HXV6 Nuclear pore complex protein NUP1552.5e-6056.73Show/hide
Query:  TAGGG-----WVVPNVFNFGAVDPIVEMIYDSERCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISL
        TAG G     WVVPNVF FGAVDP+VEM+ D+ER ILYARTEEMK+Q +V GPNG+GPLKKVAEERNL+NQ++ S G RQ+       +S KPSIV IS 
Subjt:  TAGGG-----WVVPNVFNFGAVDPIVEMIYDSERCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISL

Query:  LSTLESKSLHLLAVLSDGRRMYLTTSPSNG----NLGAYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEEKGL----------TFVLSD
        LS LESK LHL+A LSDGRRMYL+TS S      +   +++  Q P+CLKVV+TRPSPPLGVG GL FGA SV+GR  N++  +          T VLSD
Subjt:  LSTLESKSLHLLAVLSDGRRMYLTTSPSNG----NLGAYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEEKGL----------TFVLSD

Query:  SSPPTVSSLLLVSRD----PVAQSSISGTSQNTFDYQKLYSILPI
        SSPP +SSLL+VSRD      A SS   +S+++   +++ S LPI
Subjt:  SSPPTVSSLLLVSRD----PVAQSSISGTSQNTFDYQKLYSILPI

O75694 Nuclear pore complex protein Nup1552.6e-0929.65Show/hide
Query:  WVVPNV--FNFGAVDPIVEMIYDSERCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISLLSTLESKS
        ++VP++  F F   DPI+++  D+ R ILY R+E+  +QV+ LG +G G  +  +  +N +    G+         R I++S    IV I+++   ES  
Subjt:  WVVPNV--FNFGAVDPIVEMIYDSERCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISLLSTLESKS

Query:  LHLLAVLSDGRRMYLTTSPSNGNLGAYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEEKGL
          LLAV   G R+Y +T P    L        RP+ L +V  R  P         F A+S   +P    + L
Subjt:  LHLLAVLSDGRRMYLTTSPSNGNLGAYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEEKGL

P37199 Nuclear pore complex protein Nup1552.6e-0930.81Show/hide
Query:  WVVPNV--FNFGAVDPIVEMIYDSERCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISLLSTLESKS
        ++VP++  F F   DPIV++  D+ R ILY R+E+  +QV+ LG +G G  +  +  +N +    G+         R I++S    IV I+++   ES  
Subjt:  WVVPNV--FNFGAVDPIVEMIYDSERCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISLLSTLESKS

Query:  LHLLAVLSDGRRMYLTTSPSNGNLGAYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEEKGL
          LLAV   G R+Y +T P    L        RP+ L +V  R  P         F A+S   +P    K L
Subjt:  LHLLAVLSDGRRMYLTTSPSNGNLGAYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEEKGL

Q99P88 Nuclear pore complex protein Nup1559.1e-1030.81Show/hide
Query:  WVVPNV--FNFGAVDPIVEMIYDSERCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISLLSTLESKS
        ++VP++  F F   DPIV++  D+ R ILY R+E+  +QV+ LG +G G  +  +  +N +    G+         R I++S    IV I+++ + ES  
Subjt:  WVVPNV--FNFGAVDPIVEMIYDSERCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISLLSTLESKS

Query:  LHLLAVLSDGRRMYLTTSPSNGNLGAYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEEKGL
          LLAV   G R+Y +T P    L        RP+ L +V  R  P         F A+S   +P    K L
Subjt:  LHLLAVLSDGRRMYLTTSPSNGNLGAYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEEKGL

Arabidopsis top hitse value%identityAlignment
AT1G14850.1 nucleoporin 1551.8e-6156.73Show/hide
Query:  TAGGG-----WVVPNVFNFGAVDPIVEMIYDSERCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISL
        TAG G     WVVPNVF FGAVDP+VEM+ D+ER ILYARTEEMK+Q +V GPNG+GPLKKVAEERNL+NQ++ S G RQ+       +S KPSIV IS 
Subjt:  TAGGG-----WVVPNVFNFGAVDPIVEMIYDSERCILYARTEEMKVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISL

Query:  LSTLESKSLHLLAVLSDGRRMYLTTSPSNG----NLGAYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEEKGL----------TFVLSD
        LS LESK LHL+A LSDGRRMYL+TS S      +   +++  Q P+CLKVV+TRPSPPLGVG GL FGA SV+GR  N++  +          T VLSD
Subjt:  LSTLESKSLHLLAVLSDGRRMYLTTSPSNG----NLGAYSSSHQRPSCLKVVATRPSPPLGVGGGLTFGANSVSGRPLNEEKGL----------TFVLSD

Query:  SSPPTVSSLLLVSRD----PVAQSSISGTSQNTFDYQKLYSILPI
        SSPP +SSLL+VSRD      A SS   +S+++   +++ S LPI
Subjt:  SSPPTVSSLLLVSRD----PVAQSSISGTSQNTFDYQKLYSILPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAGAGAGGCAGACCTCCCTTTTCCTTCAAAGTCACCGGTGGGGGGAAGGTCTCCCTCTCTCCCTTGTCCCAGATCTGGAACGATGGAGAGAGGGAGCCTCCCTT
CCCCTGCACAGTCGCCCGCGAGAGGAGGAGGTCTCCCTCTCTGTCCTCTCGTCGGTGTAAACGGCACGGAATGACAACAGATGGAGAAAGTGCGCCAACGACGACGGCGG
GTGGTGGATGGGTTGTGCCAAATGTATTCAATTTTGGAGCTGTTGATCCCATTGTCGAAATGATATATGATAGCGAAAGATGCATTTTGTATGCAAGAACTGAGGAAATG
AAAGTTCAAGTATTTGTGTTAGGACCCAATGGTGATGGACCCCTTAAGAAAGTAGCAGAAGAAAGAAATCTGGTCAATCAGAGAAATGGATCTTATGGAGGTAGACAAGC
AAAAGGACCTAGAGCTATAAATCAATCAGCAAAGCCATCTATTGTCTGCATTTCACTCTTGTCTACGCTCGAATCAAAGTCTTTACACCTTCTAGCCGTTCTATCAGATG
GTAGAAGGATGTATTTAACCACTTCACCATCAAATGGAAACTTGGGAGCATATAGTTCCAGCCATCAGAGACCAAGTTGTTTGAAAGTCGTGGCTACGAGGCCTTCTCCT
CCTCTAGGTGTTGGTGGAGGACTTACATTTGGTGCCAACTCTGTTTCTGGTAGACCTCTAAATGAAGAGAAAGGACTTACATTTGTCCTTTCTGATTCATCTCCACCTAC
AGTGTCTTCGCTTCTTCTTGTGAGCAGGGATCCAGTAGCACAATCTTCCATATCTGGTACTTCTCAAAATACCTTCGATTATCAAAAACTTTATTCAATTTTGCCAATTA
CTTCTGTTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAGAGAGGCAGACCTCCCTTTTCCTTCAAAGTCACCGGTGGGGGGAAGGTCTCCCTCTCTCCCTTGTCCCAGATCTGGAACGATGGAGAGAGGGAGCCTCCCTT
CCCCTGCACAGTCGCCCGCGAGAGGAGGAGGTCTCCCTCTCTGTCCTCTCGTCGGTGTAAACGGCACGGAATGACAACAGATGGAGAAAGTGCGCCAACGACGACGGCGG
GTGGTGGATGGGTTGTGCCAAATGTATTCAATTTTGGAGCTGTTGATCCCATTGTCGAAATGATATATGATAGCGAAAGATGCATTTTGTATGCAAGAACTGAGGAAATG
AAAGTTCAAGTATTTGTGTTAGGACCCAATGGTGATGGACCCCTTAAGAAAGTAGCAGAAGAAAGAAATCTGGTCAATCAGAGAAATGGATCTTATGGAGGTAGACAAGC
AAAAGGACCTAGAGCTATAAATCAATCAGCAAAGCCATCTATTGTCTGCATTTCACTCTTGTCTACGCTCGAATCAAAGTCTTTACACCTTCTAGCCGTTCTATCAGATG
GTAGAAGGATGTATTTAACCACTTCACCATCAAATGGAAACTTGGGAGCATATAGTTCCAGCCATCAGAGACCAAGTTGTTTGAAAGTCGTGGCTACGAGGCCTTCTCCT
CCTCTAGGTGTTGGTGGAGGACTTACATTTGGTGCCAACTCTGTTTCTGGTAGACCTCTAAATGAAGAGAAAGGACTTACATTTGTCCTTTCTGATTCATCTCCACCTAC
AGTGTCTTCGCTTCTTCTTGTGAGCAGGGATCCAGTAGCACAATCTTCCATATCTGGTACTTCTCAAAATACCTTCGATTATCAAAAACTTTATTCAATTTTGCCAATTA
CTTCTGTTATTTGA
Protein sequenceShow/hide protein sequence
MKERGRPPFSFKVTGGGKVSLSPLSQIWNDGEREPPFPCTVARERRRSPSLSSRRCKRHGMTTDGESAPTTTAGGGWVVPNVFNFGAVDPIVEMIYDSERCILYARTEEM
KVQVFVLGPNGDGPLKKVAEERNLVNQRNGSYGGRQAKGPRAINQSAKPSIVCISLLSTLESKSLHLLAVLSDGRRMYLTTSPSNGNLGAYSSSHQRPSCLKVVATRPSP
PLGVGGGLTFGANSVSGRPLNEEKGLTFVLSDSSPPTVSSLLLVSRDPVAQSSISGTSQNTFDYQKLYSILPITSVI