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MS028470 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028470
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold41:730775..732066
RNA-Seq ExpressionMS028470
SyntenyMS028470
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022159063.1 uncharacterized protein LOC111025502, partial [Momordica charantia]2.5e-0436.62Show/hide
Query:  PSELADGTLAFIKDKYKVPASVGMRFSMCDETIENPTARHVAFYEKMFKFGVRFPLHPSTQEFLVEVNLAP
        PS + +  L  ++  + +P ++ +R     E  +NP    V  Y KMF++G+R PLHP  QEFL    LAP
Subjt:  PSELADGTLAFIKDKYKVPASVGMRFSMCDETIENPTARHVAFYEKMFKFGVRFPLHPSTQEFLVEVNLAP
TrEMBL top hitse value%identityAlignment
A0A6J1DXS5 uncharacterized protein LOC1110255021.2e-0436.62Show/hide
Query:  PSELADGTLAFIKDKYKVPASVGMRFSMCDETIENPTARHVAFYEKMFKFGVRFPLHPSTQEFLVEVNLAP
        PS + +  L  ++  + +P ++ +R     E  +NP    V  Y KMF++G+R PLHP  QEFL    LAP
Subjt:  PSELADGTLAFIKDKYKVPASVGMRFSMCDETIENPTARHVAFYEKMFKFGVRFPLHPSTQEFLVEVNLAP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAGGGACATTCCTTCCTTTATCAGACTCCAGCAGCCGACCTATCAGGTCGGCACGAATGGTCTTGTTTGGACAGGTCGTCCCCTCACGGTCGTAGCCATGTCTAT
TAAATCCAGCGATAGCTTAGAGTCACCGGAGAATAGCTCTAACGGGGTTTTTAGGTCTCCCTTAGGGGGTTCTCCCAGGGACAGGTCTCCCGACACTAGTTGTTCTGGGG
ACATGTCGGCCTCTACTAGGTCATCGGGCAGCGGGTCGGCCGTGGCGTCTCCCTCTGGTAGTGAGTCGCCTCTTGCAACCGACCTAAGAGGAGAGGGGGGCGACGCCGCC
CATGGTTTGGAGATCCAACCTTATGTCCCTAGAGCTGTTCCCTCTGAGAAGTACGAGGGAAGCCCTTCCGAGCTAGCCGATGGGACCCTTGCTTTTATTAAGGATAAGTA
TAAGGTTCCAGCATCGGTTGGGATGAGATTCTCGATGTGCGATGAGACTATAGAGAACCCTACAGCCAGGCATGTAGCCTTTTATGAGAAAATGTTTAAGTTCGGAGTCA
GGTTTCCCCTCCATCCATCCACTCAAGAGTTTCTCGTTGAGGTGAACCTCGCCCCACCCAGCTTGCTTCTAATGGCTGGGGCATCTTCCTTGGATGTTGGGTGCTGTGGT
GGGGCTCGGGGTTGACACAGTAGATGCAGACTATCTAACCCCCGAGCAACTCCTTTCGCTTTTCGCCATGAAGAACTTGCCCAAGAATCCTGGTCGGTTTTATTTGACAG
CTCGACAATGAAGGGATCAAATCCCAAGCGAAAGCGTTTTATCGCTTGTGATTCAATTTGGTTTTAGAATAGGAACGATACTGGTTCTTATAAAAATATAACAATTCTAT
TTAAAACCGAGGTTAAGCCTCACGGGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAGGGACATTCCTTCCTTTATCAGACTCCAGCAGCCGACCTATCAGGTCGGCACGAATGGTCTTGTTTGGACAGGTCGTCCCCTCACGGTCGTAGCCATGTCTAT
TAAATCCAGCGATAGCTTAGAGTCACCGGAGAATAGCTCTAACGGGGTTTTTAGGTCTCCCTTAGGGGGTTCTCCCAGGGACAGGTCTCCCGACACTAGTTGTTCTGGGG
ACATGTCGGCCTCTACTAGGTCATCGGGCAGCGGGTCGGCCGTGGCGTCTCCCTCTGGTAGTGAGTCGCCTCTTGCAACCGACCTAAGAGGAGAGGGGGGCGACGCCGCC
CATGGTTTGGAGATCCAACCTTATGTCCCTAGAGCTGTTCCCTCTGAGAAGTACGAGGGAAGCCCTTCCGAGCTAGCCGATGGGACCCTTGCTTTTATTAAGGATAAGTA
TAAGGTTCCAGCATCGGTTGGGATGAGATTCTCGATGTGCGATGAGACTATAGAGAACCCTACAGCCAGGCATGTAGCCTTTTATGAGAAAATGTTTAAGTTCGGAGTCA
GGTTTCCCCTCCATCCATCCACTCAAGAGTTTCTCGTTGAGGTGAACCTCGCCCCACCCAGCTTGCTTCTAATGGCTGGGGCATCTTCCTTGGATGTTGGGTGCTGTGGT
GGGGCTCGGGGTTGACACAGTAGATGCAGACTATCTAACCCCCGAGCAACTCCTTTCGCTTTTCGCCATGAAGAACTTGCCCAAGAATCCTGGTCGGTTTTATTTGACAG
CTCGACAATGAAGGGATCAAATCCCAAGCGAAAGCGTTTTATCGCTTGTGATTCAATTTGGTTTTAGAATAGGAACGATACTGGTTCTTATAAAAATATAACAATTCTAT
TTAAAACCGAGGTTAAGCCTCACGGGGAATAA
Protein sequenceShow/hide protein sequence
MSRDIPSFIRLQQPTYQVGTNGLVWTGRPLTVVAMSIKSSDSLESPENSSNGVFRSPLGGSPRDRSPDTSCSGDMSASTRSSGSGSAVASPSGSESPLATDLRGEGGDAA
HGLEIQPYVPRAVPSEKYEGSPSELADGTLAFIKDKYKVPASVGMRFSMCDETIENPTARHVAFYEKMFKFGVRFPLHPSTQEFLVEVNLAPPSLLLMAGASSLDVGCCG
GARGUHSRCRLSNPRATPFAFRHEELAQESWSVLFDSSTMKGSNPKRKRFIACDSIWFUNRNDTGSYKNITILFKTEVKPHGE