; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS028496 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028496
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold29:22057..22809
RNA-Seq ExpressionMS028496
SyntenyMS028496
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR008686 - RNA-dependent RNA polymerase, mitoviral


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN64513.1 hypothetical protein VITISV_004352 [Vitis vinifera]1.8e-1688.46Show/hide
Query:  INKLLTFKEQQLPDQERVGSRRPPSPEPTYGPIPEQGQPPRSSQHRKGHQPS
        +++LLTFKEQQLPDQERVGSR PP PEPTYGPIPEQGQPPRSSQHRKGHQP+
Subjt:  INKLLTFKEQQLPDQERVGSRRPPSPEPTYGPIPEQGQPPRSSQHRKGHQPS

EEF23948.1 conserved hypothetical protein, partial [Ricinus communis]5.8e-1587.04Show/hide
Query:  HQLTFSYFEQGINKLLTFKEQQLPDQERVGSRRPPSPEPTYGPIPEQGQPPRSS
        HQLTFSYF QGINKLLTFKEQQLPDQERV SR PP PEPTYG IPEQ QP RSS
Subjt:  HQLTFSYFEQGINKLLTFKEQQLPDQERVGSRRPPSPEPTYGPIPEQGQPPRSS

EEF27291.1 conserved hypothetical protein [Ricinus communis]2.9e-3879.17Show/hide
Query:  HQLTFSYFEQGINKLLTFKEQQLPDQERVGSRRPPSPEPTYGPIPEQGQPPRSSQHRKGHQPSLTKKGQTRTMKGKGGSAPVSQHASPIREERRSPIISS
        HQLTFSYF QGINKLLTFKEQQLPDQERV SR PP PEPTYG IPEQ QP RSSQHRKGHQP   ++ QTRTMK KGGSAPVSQHA  IREERRSPIISS
Subjt:  HQLTFSYFEQGINKLLTFKEQQLPDQERVGSRRPPSPEPTYGPIPEQGQPPRSSQHRKGHQPSLTKKGQTRTMKGKGGSAPVSQHASPIREERRSPIISS

Query:  APFSAQRMVTRSMRARQTQP
        AP SAQRMVTR+     + P
Subjt:  APFSAQRMVTRSMRARQTQP

EEF44036.1 conserved hypothetical protein [Ricinus communis]5.1e-3572.06Show/hide
Query:  EYVRW-W------HQLTFSYFEQGINKLLTFKEQQLPDQERVGSRRPPSPEPTYGPIPEQGQPPRSSQHRKGHQPSLTKKGQTRTMKGKGGSAPVSQHAS
        E  RW W      HQLTFSYF QGINKLLTFKEQQL DQERV SR PP PEPTYG IPEQ QP  SSQH+KGHQP   ++ QTRTMK KGGSAPVSQHA 
Subjt:  EYVRW-W------HQLTFSYFEQGINKLLTFKEQQLPDQERVGSRRPPSPEPTYGPIPEQGQPPRSSQHRKGHQPSLTKKGQTRTMKGKGGSAPVSQHAS

Query:  PIREERRSPIISSAPFSAQRMVTRSMRARQTQPARS
         I+EERR+ IISS+P SAQRMVTRSM ARQT    S
Subjt:  PIREERRSPIISSAPFSAQRMVTRSMRARQTQPARS

TrEMBL top hitse value%identityAlignment
A5AFS6 Uncharacterized protein8.7e-1788.46Show/hide
Query:  INKLLTFKEQQLPDQERVGSRRPPSPEPTYGPIPEQGQPPRSSQHRKGHQPS
        +++LLTFKEQQLPDQERVGSR PP PEPTYGPIPEQGQPPRSSQHRKGHQP+
Subjt:  INKLLTFKEQQLPDQERVGSRRPPSPEPTYGPIPEQGQPPRSSQHRKGHQPS

B9RX07 Uncharacterized protein2.4e-3572.06Show/hide
Query:  EYVRW-W------HQLTFSYFEQGINKLLTFKEQQLPDQERVGSRRPPSPEPTYGPIPEQGQPPRSSQHRKGHQPSLTKKGQTRTMKGKGGSAPVSQHAS
        E  RW W      HQLTFSYF QGINKLLTFKEQQL DQERV SR PP PEPTYG IPEQ QP  SSQH+KGHQP   ++ QTRTMK KGGSAPVSQHA 
Subjt:  EYVRW-W------HQLTFSYFEQGINKLLTFKEQQLPDQERVGSRRPPSPEPTYGPIPEQGQPPRSSQHRKGHQPSLTKKGQTRTMKGKGGSAPVSQHAS

Query:  PIREERRSPIISSAPFSAQRMVTRSMRARQTQPARS
         I+EERR+ IISS+P SAQRMVTRSM ARQT    S
Subjt:  PIREERRSPIISSAPFSAQRMVTRSMRARQTQPARS

B9TA22 Uncharacterized protein1.4e-3879.17Show/hide
Query:  HQLTFSYFEQGINKLLTFKEQQLPDQERVGSRRPPSPEPTYGPIPEQGQPPRSSQHRKGHQPSLTKKGQTRTMKGKGGSAPVSQHASPIREERRSPIISS
        HQLTFSYF QGINKLLTFKEQQLPDQERV SR PP PEPTYG IPEQ QP RSSQHRKGHQP   ++ QTRTMK KGGSAPVSQHA  IREERRSPIISS
Subjt:  HQLTFSYFEQGINKLLTFKEQQLPDQERVGSRRPPSPEPTYGPIPEQGQPPRSSQHRKGHQPSLTKKGQTRTMKGKGGSAPVSQHASPIREERRSPIISS

Query:  APFSAQRMVTRSMRARQTQP
        AP SAQRMVTR+     + P
Subjt:  APFSAQRMVTRSMRARQTQP

B9TJL5 Uncharacterized protein (Fragment)2.8e-1587.04Show/hide
Query:  HQLTFSYFEQGINKLLTFKEQQLPDQERVGSRRPPSPEPTYGPIPEQGQPPRSS
        HQLTFSYF QGINKLLTFKEQQLPDQERV SR PP PEPTYG IPEQ QP RSS
Subjt:  HQLTFSYFEQGINKLLTFKEQQLPDQERVGSRRPPSPEPTYGPIPEQGQPPRSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGCATTCTGACGTTACGGCAGGGCAACGTACGTGCTTCGGGCAGAACCGTAAAATCCCCCCCGGTTTGCAAGACAATTTGGTTTTGACTAATGAATTCCGGCACCC
GGTCACGACGTCAATCAAGCGCGTCATCTTTAACCTTTCGGAACTGGCGGGGTACTGGGCACATATGATGAGAAAGGGCACCGGGGCTCCTTTCGTGATAATGCCGGATG
GCAGAGAGGGCAAGATGGTCTTGGAGTATGTCCGATGGTGGCATCAACTGACGTTTTCTTACTTCGAGCAAGGAATCAACAAGCTGTTGACATTCAAAGAGCAGCAACTC
CCTGATCAAGAAAGAGTTGGGAGTCGAAGGCCTCCTTCTCCTGAACCCACATATGGACCCATTCCCGAGCAGGGGCAGCCACCCAGATCATCGCAACATCGGAAAGGTCA
CCAGCCCAGCCTTACGAAAAAGGGGCAAACCCGGACCATGAAAGGAAAGGGAGGTTCAGCACCCGTCAGCCAGCATGCATCCCCCATCAGGGAGGAAAGAAGAAGTCCCA
TCATTTCTTCCGCACCGTTCTCGGCTCAACGGATGGTGACTCGCAGTATGAGGGCCCGCCAAACTCAACCGGCTCGCTCACATCTGCGTTCAAGAGTCGTAAGCCGAAAC
GGCAGCATCAGCGTTTACAGCTTCAGCTCCTCCACCGGCTACACAGGAATCGCCAGCATCACGAGCACCATCTGCAGCACTCAAGGCACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGGCATTCTGACGTTACGGCAGGGCAACGTACGTGCTTCGGGCAGAACCGTAAAATCCCCCCCGGTTTGCAAGACAATTTGGTTTTGACTAATGAATTCCGGCACCC
GGTCACGACGTCAATCAAGCGCGTCATCTTTAACCTTTCGGAACTGGCGGGGTACTGGGCACATATGATGAGAAAGGGCACCGGGGCTCCTTTCGTGATAATGCCGGATG
GCAGAGAGGGCAAGATGGTCTTGGAGTATGTCCGATGGTGGCATCAACTGACGTTTTCTTACTTCGAGCAAGGAATCAACAAGCTGTTGACATTCAAAGAGCAGCAACTC
CCTGATCAAGAAAGAGTTGGGAGTCGAAGGCCTCCTTCTCCTGAACCCACATATGGACCCATTCCCGAGCAGGGGCAGCCACCCAGATCATCGCAACATCGGAAAGGTCA
CCAGCCCAGCCTTACGAAAAAGGGGCAAACCCGGACCATGAAAGGAAAGGGAGGTTCAGCACCCGTCAGCCAGCATGCATCCCCCATCAGGGAGGAAAGAAGAAGTCCCA
TCATTTCTTCCGCACCGTTCTCGGCTCAACGGATGGTGACTCGCAGTATGAGGGCCCGCCAAACTCAACCGGCTCGCTCACATCTGCGTTCAAGAGTCGTAAGCCGAAAC
GGCAGCATCAGCGTTTACAGCTTCAGCTCCTCCACCGGCTACACAGGAATCGCCAGCATCACGAGCACCATCTGCAGCACTCAAGGCACCTGA
Protein sequenceShow/hide protein sequence
MRHSDVTAGQRTCFGQNRKIPPGLQDNLVLTNEFRHPVTTSIKRVIFNLSELAGYWAHMMRKGTGAPFVIMPDGREGKMVLEYVRWWHQLTFSYFEQGINKLLTFKEQQL
PDQERVGSRRPPSPEPTYGPIPEQGQPPRSSQHRKGHQPSLTKKGQTRTMKGKGGSAPVSQHASPIREERRSPIISSAPFSAQRMVTRSMRARQTQPARSHLRSRVVSRN
GSISVYSFSSSTGYTGIASITSTICSTQGT