CuGenDBv2

Gene ID	MS028498
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Cytochrome c oxidase subunit 2
Genome location	scaffold29:30335..30889
RNA-Seq Expression	MS028498
Synteny	MS028498
Gene Ontology terms	GO:0022900 - electron transport chain (biological process) GO:1902600 - proton transmembrane transport (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0070469 - respirasome (cellular component) GO:0004129 - cytochrome-c oxidase activity (molecular function) GO:0005507 - copper ion binding (molecular function)
InterPro domains	IPR002429 - Cytochrome c oxidase subunit II-like C-terminal IPR008972 - Cupredoxin IPR011759 - Cytochrome C oxidase subunit II, transmembrane domain IPR034210 - Cytochrome c oxidase subunit 2, C-terminal

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TXG46228.1 hypothetical protein EZV62_028259 [Acer yangbiense]

3.8e-96

97.28

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Query:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS
        MFIAIPSFALLYSMDEVVVDPA+TIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVV+PAKTHLRIIVT ADVPHSWAVPS
Subjt:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS

Query:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGAKQ
        SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAF RAPGNIGRLLSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGA+Q
Subjt:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGAKQ

WP_131747038.1 cytochrome c oxidase subunit II [Candidatus Frankia meridionalis]

7.6e-97

98.36

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Query:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS
        MFIAIPSFALLYSMDEVVVDPA+TIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVV+PAKTHLRIIVTPADVPHSWAVPS
Subjt:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS

Query:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGAK
        SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFTRAPGNIGR LSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGAK
Subjt:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGAK

WP_165490465.1 cytochrome c oxidase subunit II, partial [Frankia symbiont of Coriaria myrtifolia]

3.4e-97

98.37

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Query:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS
        MFIAIPSFALLYSMDEVVVDPA+TIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVV+PAKTHLRIIVT ADVPHSWAVPS
Subjt:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS

Query:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGAKQ
        SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGAKQ
Subjt:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGAKQ

XP_015868752.1 uncharacterized protein LOC107406162 [Ziziphus jujuba]

4.5e-97

97.83

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Query:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS
        MFIAIPSFALLYSMDEVVVDPA+TIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVV+PAKTHLRIIVTPADVPHSWAVPS
Subjt:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS

Query:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGAKQ
        SGVKCDAVPGRLNQISI VQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGA+Q
Subjt:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGAKQ

XP_024925120.1 uncharacterized protein LOC107406125 [Ziziphus jujuba]

4.5e-97

97.83

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Query:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS
        MFIAIPSFALLYSMDEVVVDPA+TIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVV+PAKTHLRIIVTPADVPHSWAVPS
Subjt:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS

Query:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGAKQ
        SGVKCDAVPGRLNQISI VQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGA+Q
Subjt:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGAKQ

TrEMBL top hits

e value

%identity

Alignment

A0A2Z4HGM3 Cytochrome c oxidase subunit 2

9.1e-96

96.2

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Query:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS
        MFIAIPSFALLYSMDEVVVDPA+TIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVV+PAK HLRIIVTPADVPHSWAVPS
Subjt:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS

Query:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGAKQ
         GVKCDAVPGRLNQISI VQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRTTRGASHP+SKLLQRAAGAVGSRGA+Q
Subjt:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGAKQ

A0A385I1U0 Cytochrome c oxidase subunit 2

2.4e-96

96.74

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Query:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS
        MFIAIPSFALLYSMDEVVVDPA+TIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVV+PAKTHLRIIVTPADVPHSWAVPS
Subjt:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS

Query:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGAKQ
         GVKCDAVPGRLNQISI VQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRTTRGASHP+SKLLQRAAGAVGSRGA+Q
Subjt:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGAKQ

A0A5C7GNR7 Cytochrome c oxidase subunit 2

1.8e-96

97.28

Show/hide

Query:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS
        MFIAIPSFALLYSMDEVVVDPA+TIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVV+PAKTHLRIIVT ADVPHSWAVPS
Subjt:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS

Query:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGAKQ
        SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAF RAPGNIGRLLSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGA+Q
Subjt:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGAKQ

A0A6P3YWJ4 Cytochrome c oxidase subunit 2

2.2e-97

97.83

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Query:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS
        MFIAIPSFALLYSMDEVVVDPA+TIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVV+PAKTHLRIIVTPADVPHSWAVPS
Subjt:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS

Query:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGAKQ
        SGVKCDAVPGRLNQISI VQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGA+Q
Subjt:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGAKQ

A0A6P6FU93 Cytochrome c oxidase subunit 2

2.2e-97

97.83

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Query:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS
        MFIAIPSFALLYSMDEVVVDPA+TIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVV+PAKTHLRIIVTPADVPHSWAVPS
Subjt:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS

Query:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGAKQ
        SGVKCDAVPGRLNQISI VQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGA+Q
Subjt:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGAKQ

SwissProt top hits

e value

%identity

Alignment

P05491 Cytochrome c oxidase subunit 2

1.5e-74

97.14

Show/hide

Query:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS
        MFIAIPSFALLYSMDEVVVDPA+TIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVV+PAKTHLRIIVTPADVPHSWAVPS
Subjt:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS

Query:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFT
         GVKCDAVPGRLNQISI VQREGVYYGQCSEICGTNHAFT
Subjt:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFT

P08744 Cytochrome c oxidase subunit 2

1.8e-72

95.68

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Query:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS
        MFIAIPSFALLYSMD V+VDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQS LLEVDNRVV+PAKTHLRIIVTPADVPHSWAVPS
Subjt:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS

Query:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAF
         GVKCDAVPGRLNQISI VQREGVYYGQCSEICGTNHAF
Subjt:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAF

P27168 Cytochrome c oxidase subunit 2

5.5e-74

97.14

Show/hide

Query:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS
        MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDD ELGQSRLLEVDNRVV+PAKTHLRIIVT ADVPHSWAVPS
Subjt:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS

Query:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFT
        SGVKCDAVPGRLNQISI VQREGVYYGQCSEICGTNHAFT
Subjt:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFT

P93285 Cytochrome c oxidase subunit 2

8.2e-70

93.53

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Query:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS
        MFIAIPSFALLYSMDEVVVDPA+TIKAIGHQWY TYEYSDYNSSDEQSLTFDSY IPE+DLELGQ RLLEVDNRVV+PAKTHLRIIVT ADV HSWAVPS
Subjt:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS

Query:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAF
         GVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAF
Subjt:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAF

P98012 Cytochrome c oxidase subunit 2

3.3e-71

94.24

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Query:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS
        MFIAIPSFALLYSMDEVVVDPA+TIKAIGHQWYR+YEYSDYNSSDEQSLTFDSYTIPEDD ELGQSRLLEVDNRVV+PAKTH+RIIVT ADV HSWAVPS
Subjt:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS

Query:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAF
        SGVKCDAVPGRLNQ SILVQREGVYYGQCSEICGTNHAF
Subjt:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAF

Arabidopsis top hits

e value

%identity

Alignment

ATMG00160.1 cytochrome oxidase 2

5.1e-75

96.43

Show/hide

Query:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS
        MFIAIPSFALLYSMDEVVVDPA+TIKAIGHQWYRTYEYSDYNSSDEQSLTFDSY IPE+DLELGQSRLLEVDNRVV+PAKTHLRIIVT ADVPHSWAVPS
Subjt:  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPS

Query:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFT
        SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFT
Subjt:  SGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFT

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTTCATTGCTATACCATCATTTGCTCTCTTATACTCAATGGACGAGGTAGTAGTAGATCCAGCCATGACTATCAAAGCTATTGGACATCAATGGTATCGGACTTATGA
GTATTCTGACTATAACAGTTCCGATGAACAGTCACTCACTTTTGACAGTTATACGATTCCAGAAGATGATCTAGAATTGGGTCAATCACGTTTATTAGAAGTGGACAATA
GAGTGGTTCTACCAGCCAAAACTCATCTACGTATTATTGTAACACCTGCTGATGTACCTCATAGTTGGGCTGTACCTTCCTCAGGTGTCAAATGTGATGCTGTACCTGGT
CGTTTAAATCAGATCTCCATTTTGGTACAACGAGAAGGAGTTTACTATGGTCAGTGCAGTGAGATTTGTGGAACTAATCATGCCTTTACGCGTGCGCCCGGAAACATAGG
CCGACTGCTGAGCCCACTCTGGCTCAGCCGCACCACCCGGGGTGCGAGCCACCCGAGAAGCAAGCTATTACAGCGAGCGGCTGGAGCTGTAGGGAGCCGAGGAGCAAAGC
AGTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPSSGVKCDAVPG
RLNQISILVQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGAKQ

MS028498 (gene) of Bitter gourd (TR) v1 genome