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MS028499 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028499
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold29:32739..36907
RNA-Seq ExpressionMS028499
SyntenyMS028499
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1219100.1 hypothetical protein CJ030_MR3G018699 [Morella rubra]1.3e-3690.72Show/hide
Query:  VLEASPEASKTRSPLSLKFVDKARSVLDLRARVVLAPISKGAYALHSLSYKRALERASEAFNLGASPLIPHPTLSFPLKLPRFGGLIDWIPENHNLS
        VLEASPEASK R   SL FVDKARSVLDLRARVVLAPISK AYALHSLS KRALERASEAF+L ASPLIPHPTLSFPLKLPRFGGLIDWIPENHNLS
Subjt:  VLEASPEASKTRSPLSLKFVDKARSVLDLRARVVLAPISKGAYALHSLSYKRALERASEAFNLGASPLIPHPTLSFPLKLPRFGGLIDWIPENHNLS
KAF3452236.1 hypothetical protein FNV43_RR08334 [Rhamnella rubrinervis]5.0e-1257.69Show/hide
Query:  YTCLPPLKAPGAATIT----------------------------AKERISGSLDLPNGFQYAYTVNLYTHDSGSQVGH
        YTCLPPLKA GAAT+T                            AKERISGSLDLPNGFQYAY V+LYTHDSGSQV H
Subjt:  YTCLPPLKAPGAATIT----------------------------AKERISGSLDLPNGFQYAYTVNLYTHDSGSQVGH
KMT03782.1 hypothetical protein BVRB_8g189280 isoform B [Beta vulgaris subsp. vulgaris]6.1e-1079.31Show/hide
Query:  AVLEASPEASKTRSPLSLKFVDKARSVLDLRARVVLAPISKGAYALHSLSYKRALERA
        A  E SPEASKTR   SL FVDKARSVLDL+ARVVLA ISKGAYAL+ LS KRALERA
Subjt:  AVLEASPEASKTRSPLSLKFVDKARSVLDLRARVVLAPISKGAYALHSLSYKRALERA
TrEMBL top hitse value%identityAlignment
A0A2P2NNH6 Uncharacterized protein2.2e-0579.07Show/hide
Query:  LKFVDKARSVLDLRARVVLAPI--SKGAYALHSLSYKRALERA
        ++ +  ARSVLDLRARVVLAPI  SKGAYALHSLS KRALERA
Subjt:  LKFVDKARSVLDLRARVVLAPI--SKGAYALHSLSYKRALERA
A0A6A1W8I2 Uncharacterized protein6.3e-3790.72Show/hide
Query:  VLEASPEASKTRSPLSLKFVDKARSVLDLRARVVLAPISKGAYALHSLSYKRALERASEAFNLGASPLIPHPTLSFPLKLPRFGGLIDWIPENHNLS
        VLEASPEASK R   SL FVDKARSVLDLRARVVLAPISK AYALHSLS KRALERASEAF+L ASPLIPHPTLSFPLKLPRFGGLIDWIPENHNLS
Subjt:  VLEASPEASKTRSPLSLKFVDKARSVLDLRARVVLAPISKGAYALHSLSYKRALERASEAFNLGASPLIPHPTLSFPLKLPRFGGLIDWIPENHNLS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCTCTCCCGTCAGGGAGCGCATTAGATATTTACCTAAACCGGTAGGTAGGTCCTTGAGCAGATCCCACGTTAGCCCCAAGACGAGTAAATGCTTGAGCTTAAGTGA
GAAGGGCCTCCTCCCCCCGCTGGTATTTTGCCTGTATGGTGTTTACCGGGGGGGACCCTCGATCCGGAAGGTATGCCACTATCGGCTACTATCGAGATATACATGTTTGC
CTCCCTTGAAAGCTCCTGGTGCTGCGACTATCACCGCTAAGGAGCGGATTTCAGGGTCCCTTGACTTGCCAAACGGTTTCCAGTATGCCTATACAGTCAATCTTTACACA
CATGATAGTGGCAGCCAGGTCGGTCATCTGTTCAATCTGGAATTCCATCTCTTGTTTGGTTTCTGGTACCGGTTTGAGTTCCTTTGTTCAAATCAATATCTATGTCAGGC
TTCCCTTCCCGGTTGTCCTGTCCTGTTCAATCCGTTGTTCTTCTGTCCAATCAAATATCCCGGTCGAGCTGGCTTGGCTGTGCTAGAAGCTTCGCCAGAAGCAAGCAAGA
CGAGGTCGCCCCTATCTCTAAAGTTCGTAGACAAGGCTCGTTCCGTACTTGACTTACGAGCTCGTGTAGTACTCGCCCCTATCTCTAAAGGGGCTTATGCACTCCACTCG
CTGTCGTATAAACGAGCGTTAGAGCGAGCGAGCGAAGCCTTCAATTTAGGGGCTTCCCCCCTTATCCCTCACCCTACCCTTTCATTTCCGCTTAAGCTTCCCCGGTTTGG
GGGATTAATTGATTGGATACCCGAGAACCATAATCTTTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACCTCTCCCGTCAGGGAGCGCATTAGATATTTACCTAAACCGGTAGGTAGGTCCTTGAGCAGATCCCACGTTAGCCCCAAGACGAGTAAATGCTTGAGCTTAAGTGA
GAAGGGCCTCCTCCCCCCGCTGGTATTTTGCCTGTATGGTGTTTACCGGGGGGGACCCTCGATCCGGAAGGTATGCCACTATCGGCTACTATCGAGATATACATGTTTGC
CTCCCTTGAAAGCTCCTGGTGCTGCGACTATCACCGCTAAGGAGCGGATTTCAGGGTCCCTTGACTTGCCAAACGGTTTCCAGTATGCCTATACAGTCAATCTTTACACA
CATGATAGTGGCAGCCAGGTCGGTCATCTGTTCAATCTGGAATTCCATCTCTTGTTTGGTTTCTGGTACCGGTTTGAGTTCCTTTGTTCAAATCAATATCTATGTCAGGC
TTCCCTTCCCGGTTGTCCTGTCCTGTTCAATCCGTTGTTCTTCTGTCCAATCAAATATCCCGGTCGAGCTGGCTTGGCTGTGCTAGAAGCTTCGCCAGAAGCAAGCAAGA
CGAGGTCGCCCCTATCTCTAAAGTTCGTAGACAAGGCTCGTTCCGTACTTGACTTACGAGCTCGTGTAGTACTCGCCCCTATCTCTAAAGGGGCTTATGCACTCCACTCG
CTGTCGTATAAACGAGCGTTAGAGCGAGCGAGCGAAGCCTTCAATTTAGGGGCTTCCCCCCTTATCCCTCACCCTACCCTTTCATTTCCGCTTAAGCTTCCCCGGTTTGG
GGGATTAATTGATTGGATACCCGAGAACCATAATCTTTCCTAG
Protein sequenceShow/hide protein sequence
MTSPVRERIRYLPKPVGRSLSRSHVSPKTSKCLSLSEKGLLPPLVFCLYGVYRGGPSIRKVCHYRLLSRYTCLPPLKAPGAATITAKERISGSLDLPNGFQYAYTVNLYT
HDSGSQVGHLFNLEFHLLFGFWYRFEFLCSNQYLCQASLPGCPVLFNPLFFCPIKYPGRAGLAVLEASPEASKTRSPLSLKFVDKARSVLDLRARVVLAPISKGAYALHS
LSYKRALERASEAFNLGASPLIPHPTLSFPLKLPRFGGLIDWIPENHNLS