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MS028508 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028508
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDIOX_N domain-containing protein
Genome locationscaffold29:111538..115659
RNA-Seq ExpressionMS028508
SyntenyMS028508
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFS28707.1 hypothetical protein Acr_00g0003430 [Actinidia rufa]1.1e-0769.39Show/hide
Query:  AIKKYLLLTLRCADPGCYS--RAGQGQVPVTLSMPCHCGGTGTTEWGRF
        +I+KYLLLTLRCAD    S     QGQV +TLSMPCH GGTGTTEWG F
Subjt:  AIKKYLLLTLRCADPGCYS--RAGQGQVPVTLSMPCHCGGTGTTEWGRF
KAF3773510.1 hypothetical protein EJ110_NYTH47861 [Nymphaea thermarum]1.5e-0472.73Show/hide
Query:  KELLSSSVSTNSVDIDNPVPQEGGLEKVSGAIKKYLLLTLRCAD
        K+ L+    T SVDI+NPVPQEGGL  VSGAIKK LLLTLRCAD
Subjt:  KELLSSSVSTNSVDIDNPVPQEGGLEKVSGAIKKYLLLTLRCAD
TrEMBL top hitse value%identityAlignment
A0A3Q7G0S4 DIOX_N domain-containing protein2.1e-0790Show/hide
Query:  VPVTLSMPCHCGGTGTTEWGRFSSHRWRVE
        +PVTLSM CHCGGTGT EWGRFSSHRWRVE
Subjt:  VPVTLSMPCHCGGTGTTEWGRFSSHRWRVE
A0A7J0D8Y4 Uncharacterized protein5.5e-0869.39Show/hide
Query:  AIKKYLLLTLRCADPGCYS--RAGQGQVPVTLSMPCHCGGTGTTEWGRF
        +I+KYLLLTLRCAD    S     QGQV +TLSMPCH GGTGTTEWG F
Subjt:  AIKKYLLLTLRCADPGCYS--RAGQGQVPVTLSMPCHCGGTGTTEWGRF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGGGCTTCTCAAACAGAGGCAGTGTTGCAGAAAAAAGAGCTTTTGTCTTCTTCAGTTAGTACAAATTCGGTCGATATCGACAATCCAGTTCCGCAGGAAGGAGG
CCTAGAAAAGGTCAGCGGGGCAATCAAAAAATACCTGCTTTTGACGCTACGCTGTGCCGACCCGGGATGCTACTCACGAGCTGGTCAGGGACAGGTTCCGGTCACTCTTT
CGATGCCATGCCATTGTGGTGGCACGGGAACCACTGAATGGGGGCGGTTTTCATCTCATCGCTGGCGTGTGGAATACAAGTGCATCCAAGCACAGCGCAGCCAAGAGGGT
CCAAGATTGCTTCGTCGAATGGGCTGGCCTTTTAGTTTAGAGAGCAGTAGAATGTTGGCTAATGTGACTTTCTTGATCTATAGTTCCTCTTCTTTCTCTCTCTTGACCAA
TGCTCCGGCTTCCCTCACTCAAAAGATCCGCCATTGTGACACAGGTGTATCGAGTGAGCAAACGAGCTTCGGAATTGGATCAAAGCCAAGAACCGAGTTCCTGGAGTGTC
CGGATCAGCCCTATGAGATCGAGAAGGGCGAAAGGTGCAGATTTGGCGTCGGCCTAGGCTTATTTATACGTAGGATTTGGTACGAGAGCCTATGCTTTAGGAACAGGCTC
AGGCCCCATAGCTTAAGGTGGATCGGATCCTACATACTTGTCACACAGACAGACGCAAAATTGGAAAACAAATCATCAACTTCAACTGCTTCATGCCCCGGATCACGGGG
GGAAACAGGAGCTTTTGGTTTGGATGCTTCGGTGGGTTCGGATGAAACAGAAAAATCTTACTCCTCAGTGGATGATTCGGCATCCTCGGGTGCTTATGTGACCAAGCAAG
GGCTGACATTAGCGAATGCTCATAACGTCCTTGCTTTCTCGATATCAGTAATTAAGGATCTCTCCTCCTTCTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATAGGGCTTCTCAAACAGAGGCAGTGTTGCAGAAAAAAGAGCTTTTGTCTTCTTCAGTTAGTACAAATTCGGTCGATATCGACAATCCAGTTCCGCAGGAAGGAGG
CCTAGAAAAGGTCAGCGGGGCAATCAAAAAATACCTGCTTTTGACGCTACGCTGTGCCGACCCGGGATGCTACTCACGAGCTGGTCAGGGACAGGTTCCGGTCACTCTTT
CGATGCCATGCCATTGTGGTGGCACGGGAACCACTGAATGGGGGCGGTTTTCATCTCATCGCTGGCGTGTGGAATACAAGTGCATCCAAGCACAGCGCAGCCAAGAGGGT
CCAAGATTGCTTCGTCGAATGGGCTGGCCTTTTAGTTTAGAGAGCAGTAGAATGTTGGCTAATGTGACTTTCTTGATCTATAGTTCCTCTTCTTTCTCTCTCTTGACCAA
TGCTCCGGCTTCCCTCACTCAAAAGATCCGCCATTGTGACACAGGTGTATCGAGTGAGCAAACGAGCTTCGGAATTGGATCAAAGCCAAGAACCGAGTTCCTGGAGTGTC
CGGATCAGCCCTATGAGATCGAGAAGGGCGAAAGGTGCAGATTTGGCGTCGGCCTAGGCTTATTTATACGTAGGATTTGGTACGAGAGCCTATGCTTTAGGAACAGGCTC
AGGCCCCATAGCTTAAGGTGGATCGGATCCTACATACTTGTCACACAGACAGACGCAAAATTGGAAAACAAATCATCAACTTCAACTGCTTCATGCCCCGGATCACGGGG
GGAAACAGGAGCTTTTGGTTTGGATGCTTCGGTGGGTTCGGATGAAACAGAAAAATCTTACTCCTCAGTGGATGATTCGGCATCCTCGGGTGCTTATGTGACCAAGCAAG
GGCTGACATTAGCGAATGCTCATAACGTCCTTGCTTTCTCGATATCAGTAATTAAGGATCTCTCCTCCTTCTGGTAG
Protein sequenceShow/hide protein sequence
MDRASQTEAVLQKKELLSSSVSTNSVDIDNPVPQEGGLEKVSGAIKKYLLLTLRCADPGCYSRAGQGQVPVTLSMPCHCGGTGTTEWGRFSSHRWRVEYKCIQAQRSQEG
PRLLRRMGWPFSLESSRMLANVTFLIYSSSSFSLLTNAPASLTQKIRHCDTGVSSEQTSFGIGSKPRTEFLECPDQPYEIEKGERCRFGVGLGLFIRRIWYESLCFRNRL
RPHSLRWIGSYILVTQTDAKLENKSSTSTASCPGSRGETGAFGLDASVGSDETEKSYSSVDDSASSGAYVTKQGLTLANAHNVLAFSISVIKDLSSFW