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MS028512 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028512
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-actin-capping protein subunit alpha
Genome locationscaffold29:136932..137577
RNA-Seq ExpressionMS028512
SyntenyMS028512
Gene Ontology termsGO:0051016 - barbed-end actin filament capping (biological process)
GO:0008290 - F-actin capping protein complex (cellular component)
GO:0003779 - actin binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEX55153.1 BSD domain-containing protein 1 [Tanacetum cinerariifolium]5.1e-1087.18Show/hide
Query:  EDWQSSSFSGGVFIEKKASPNEWQIWMESRFDAGEIHRS
        E+WQSSSFSGGVF+EKKASPNEWQI MESR DA EIHRS
Subjt:  EDWQSSSFSGGVFIEKKASPNEWQIWMESRFDAGEIHRS

GFC40251.1 hypothetical protein TanjilG_32901 [Tanacetum cinerariifolium]2.4e-1587.76Show/hide
Query:  PVFSPGRVGGEDWQSSSFSGGVFIEKKASPNEWQIWMESRFDAGEIHRS
        PVFSPG VGGE+WQSSSFSGGVF+EKKASPNEWQI MESR DA EIHRS
Subjt:  PVFSPGRVGGEDWQSSSFSGGVFIEKKASPNEWQIWMESRFDAGEIHRS

OIW13576.1 hypothetical protein TanjilG_29317 [Lupinus angustifolius]9.3e-1294.87Show/hide
Query:  VFSPGRVGGEDWQSSSFSGGVFIEKKASPNEWQIWMESR
        VFSPGRVGGEDWQSSSFSGGVFIEK+ASPNEWQI MESR
Subjt:  VFSPGRVGGEDWQSSSFSGGVFIEKKASPNEWQIWMESR

RDY08745.1 hypothetical protein CR513_06995, partial [Mucuna pruriens]2.9e-1397.44Show/hide
Query:  VFSPGRVGGEDWQSSSFSGGVFIEKKASPNEWQIWMESR
        VFSPGRVGGEDWQSSSFSGGVFIEK+ASPNEWQIWMESR
Subjt:  VFSPGRVGGEDWQSSSFSGGVFIEKKASPNEWQIWMESR

RXI05906.1 hypothetical protein DVH24_017948 [Malus domestica]8.1e-1687.76Show/hide
Query:  PVFSPGRVGGEDWQSSSFSGGVFIEKKASPNEWQIWMESRFDAGEIHRS
        P+FSPGRVGGEDWQSSSF+GGV IEKKASPN+WQI M SRFDAGEIHRS
Subjt:  PVFSPGRVGGEDWQSSSFSGGVFIEKKASPNEWQIWMESRFDAGEIHRS

TrEMBL top hitse value%identityAlignment
A0A1J7HLA6 F-actin-capping protein subunit alpha4.5e-1294.87Show/hide
Query:  VFSPGRVGGEDWQSSSFSGGVFIEKKASPNEWQIWMESR
        VFSPGRVGGEDWQSSSFSGGVFIEK+ASPNEWQI MESR
Subjt:  VFSPGRVGGEDWQSSSFSGGVFIEKKASPNEWQIWMESR

A0A371I128 Uncharacterized protein (Fragment)1.4e-1397.44Show/hide
Query:  VFSPGRVGGEDWQSSSFSGGVFIEKKASPNEWQIWMESR
        VFSPGRVGGEDWQSSSFSGGVFIEK+ASPNEWQIWMESR
Subjt:  VFSPGRVGGEDWQSSSFSGGVFIEKKASPNEWQIWMESR

A0A498KET4 Uncharacterized protein3.9e-1687.76Show/hide
Query:  PVFSPGRVGGEDWQSSSFSGGVFIEKKASPNEWQIWMESRFDAGEIHRS
        P+FSPGRVGGEDWQSSSF+GGV IEKKASPN+WQI M SRFDAGEIHRS
Subjt:  PVFSPGRVGGEDWQSSSFSGGVFIEKKASPNEWQIWMESRFDAGEIHRS

A0A699PL36 Uncharacterized protein (Fragment)1.1e-1587.76Show/hide
Query:  PVFSPGRVGGEDWQSSSFSGGVFIEKKASPNEWQIWMESRFDAGEIHRS
        PVFSPG VGGE+WQSSSFSGGVF+EKKASPNEWQI MESR DA EIHRS
Subjt:  PVFSPGRVGGEDWQSSSFSGGVFIEKKASPNEWQIWMESRFDAGEIHRS

A0A6J5XS65 Uncharacterized protein2.3e-0875Show/hide
Query:  MLARSGVDSISRDSATEDFIAPLCLHLSSRAQSLAGALAHQARKRWID
        MLARSGVDSISRDS TEDFIAPLCLHLSSRAQ LAG +    R  ++D
Subjt:  MLARSGVDSISRDSATEDFIAPLCLHLSSRAQSLAGALAHQARKRWID

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGCTCGGAGCGGGGTCGACTCAATATCGAGAGACTCAGCCACCGAGGACTTTATCGCACCTTTATGTCTCCATCTCTCGAGTCGAGCTCAATCTCTGGCAGGCGC
ACTAGCGCACCAAGCAAGAAAACGGTGGATTGACTGGCTAACTAGTGCAATCAACAAAAAGAGCCTTCGCCTTAGTAAGCTAGCTTTGGTTGCTAAGCAAGCCTGGTTCT
CCGGGCACTACGGCGGGCCAAGCCCTTACCCTGTGTTCTCTCCAGGTCGGGTCGGAGGCGAAGACTGGCAAAGTTCATCATTCAGTGGTGGGGTGTTCATAGAAAAGAAG
GCGTCGCCAAACGAGTGGCAGATTTGGATGGAGTCTCGCTTTGATGCTGGGGAGATCCATAGATCTGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTGCTCGGAGCGGGGTCGACTCAATATCGAGAGACTCAGCCACCGAGGACTTTATCGCACCTTTATGTCTCCATCTCTCGAGTCGAGCTCAATCTCTGGCAGGCGC
ACTAGCGCACCAAGCAAGAAAACGGTGGATTGACTGGCTAACTAGTGCAATCAACAAAAAGAGCCTTCGCCTTAGTAAGCTAGCTTTGGTTGCTAAGCAAGCCTGGTTCT
CCGGGCACTACGGCGGGCCAAGCCCTTACCCTGTGTTCTCTCCAGGTCGGGTCGGAGGCGAAGACTGGCAAAGTTCATCATTCAGTGGTGGGGTGTTCATAGAAAAGAAG
GCGTCGCCAAACGAGTGGCAGATTTGGATGGAGTCTCGCTTTGATGCTGGGGAGATCCATAGATCTGTATAG
Protein sequenceShow/hide protein sequence
MLARSGVDSISRDSATEDFIAPLCLHLSSRAQSLAGALAHQARKRWIDWLTSAINKKSLRLSKLALVAKQAWFSGHYGGPSPYPVFSPGRVGGEDWQSSSFSGGVFIEKK
ASPNEWQIWMESRFDAGEIHRSV