CuGenDBv2

Gene ID	MS028519
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ORF43m
Genome location	scaffold29:167832..168080
RNA-Seq Expression	MS028519
Synteny	MS028519
Gene Ontology terms	GO:0006101 - citrate metabolic process (biological process) GO:0006351 - transcription, DNA-templated (biological process) GO:0009507 - chloroplast (cellular component) GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function) GO:0004108 - citrate (Si)-synthase activity (molecular function) GO:0032549 - ribonucleoside binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

ERM97427.1 hypothetical protein AMTR_s02909p00006680 [Amborella trichopoda]

9.4e-39

97.56

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Query:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
        MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQG LR+PGVADRP
Subjt:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP

KAB8477470.1 hypothetical protein FH972_025336 [Carpinus fangiana]

3.9e-37

95.12

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Query:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
        MDRTWTVVGVGGS R PSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQG LR+PGVADRP
Subjt:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP

PQP98136.1 hypothetical protein Pyn_20559 [Prunus yedoensis var. nudiflora]

5.2e-37

95.12

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Query:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
        MDRTWTVVGVGGS RVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKE KSMDRPHRLHPVGTTRSPQG LR+PGVADRP
Subjt:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP

QHE65624.1 ORF43m [Nitraria roborowskii]

2.5e-39

98.78

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Query:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
        MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQG LRYPGVADRP
Subjt:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP

YP_009758287.1 hypothetical protein [Rubus amabilis]

5.2e-37

95.12

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Query:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
        MDRTWTVVGVGGS RVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKE KSMDRPHRLHPVGTTRSPQG LR+PGVADRP
Subjt:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP

TrEMBL top hits

e value

%identity

Alignment

A0A5N6L147 Uncharacterized protein

1.9e-37

95.12

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Query:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
        MDRTWTVVGVGGS R PSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQG LR+PGVADRP
Subjt:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP

A0A6B9QF48 ORF43m

1.2e-39

98.78

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Query:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
        MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQG LRYPGVADRP
Subjt:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP

A0A6B9QFK3 ORF43m

1.2e-39

98.78

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Query:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
        MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQG LRYPGVADRP
Subjt:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP

A0A6B9QGL2 ORF43m

1.2e-39

98.78

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Query:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
        MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQG LRYPGVADRP
Subjt:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP

U5CKY2 Uncharacterized protein

4.5e-39

97.56

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Query:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
        MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQG LR+PGVADRP
Subjt:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGATCGTACATGGACGGTAGTTGGAGTCGGCGGCTCTCTTAGGGTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAGCTTGATGCACT
ATCTCCCTTCAACCCTTTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATGGACCGACCCCATCGTCTCCACCCCGTAGGAACTACGAGATCACCCCAAGGATGCCTTC
GGTATCCAGGGGTCGCGGACCGACCATAG

mRNA sequence

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Protein sequence

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MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP

MS028519 (gene) of Bitter gourd (TR) v1 genome