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MS028520 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028520
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGemini_AL1 domain-containing protein
Genome locationscaffold29:182614..184229
RNA-Seq ExpressionMS028520
SyntenyMS028520
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF27325.1 conserved hypothetical protein [Ricinus communis]1.2e-1439.29Show/hide
Query:  ASKHTATKKIRECFTEWEGRALDVKFHKAWAPIWLYLIKEDKELLVWGEYTLEEIIEIVDTRKKRKKSQKSQPEQVIDKLLKCHDWYQIYKDPVLRKLAV
        AS++TA K IR    E++G   DVKFH+ W  +  Y+ KEDK  +VWGEY+L++I+EI    + R  +  +        L KC+DWY++Y+   L+   +
Subjt:  ASKHTATKKIRECFTEWEGRALDVKFHKAWAPIWLYLIKEDKELLVWGEYTLEEIIEIVDTRKKRKKSQKSQPEQVIDKLLKCHDWYQIYKDPVLRKLAV

Query:  LSYESIRNLYED
          Y +IRN++ED
Subjt:  LSYESIRNLYED

KAA0036662.1 hypothetical protein E6C27_scaffold43296G00060 [Cucumis melo var. makuwa]1.2e-1740.16Show/hide
Query:  ASKHTATKKIRECFTEWEGRALDVKFHKAWAPIWLYLIKEDKELLVWGEYTLEEIIEIVDTRKKRKKSQKSQPE-------QVIDKLLKCHDWYQIYKDP
        ASK+ A  KIRE   EWEGR  DV FHK W  +  Y+ K+DK   VWG++T+ +++      +  K ++K  PE       ++  KL +C+D+  + KDP
Subjt:  ASKHTATKKIRECFTEWEGRALDVKFHKAWAPIWLYLIKEDKELLVWGEYTLEEIIEIVDTRKKRKKSQKSQPE-------QVIDKLLKCHDWYQIYKDP

Query:  VLRKLAVLSYESIRNLYEDPQT
         L  L +L Y++IRNL+ED Q+
Subjt:  VLRKLAVLSYESIRNLYEDPQT

KAF3452224.1 hypothetical protein FNV43_RR08322 [Rhamnella rubrinervis]5.8e-2851.94Show/hide
Query:  MRGYASKHTATKKIRECFTEWEGRALDVKFHKAWAPIWLYLIKEDKELLVWGEYTLEEIIEI-VDTRKKRKKS------------QKSQPEQVIDKLLKC
        + G ASK+TATKKIR+   EWEGR LDV+FH+ W  I  YL+KED + LVWGEY+LEEI+ I     +K KK+            + + PE +I+KL +C
Subjt:  MRGYASKHTATKKIRECFTEWEGRALDVKFHKAWAPIWLYLIKEDKELLVWGEYTLEEIIEI-VDTRKKRKKS------------QKSQPEQVIDKLLKC

Query:  HDWYQIYKDPVLRKLAVLSYESIRNLYED
        + WY+IY DP+LRKL+V SY+S+RNLY+D
Subjt:  HDWYQIYKDPVLRKLAVLSYESIRNLYED

TXG46227.1 hypothetical protein EZV62_028258 [Acer yangbiense]4.7e-1443.14Show/hide
Query:  SKHTATKKIRECFTEWEGRALDVKFHKAWAPIWLYLIKEDKELLVWGEYTLEEIIEIVDTRKKRKKSQKSQPEQVIDKLLKCHDWYQIYKDPVLRKLAVL
        +KH A K IR  F E++G   +V+F K W  +  YL KEDK  LVWGEYT E+I++I +  +  KK      + V+D L KC DW+ IY + VL      
Subjt:  SKHTATKKIRECFTEWEGRALDVKFHKAWAPIWLYLIKEDKELLVWGEYTLEEIIEIVDTRKKRKKSQKSQPEQVIDKLLKCHDWYQIYKDPVLRKLAVL

Query:  SY
        SY
Subjt:  SY

TYK02125.1 hypothetical protein E5676_scaffold83326G00020 [Cucumis melo var. makuwa]1.2e-1740.16Show/hide
Query:  ASKHTATKKIRECFTEWEGRALDVKFHKAWAPIWLYLIKEDKELLVWGEYTLEEIIEIVDTRKKRKKSQKSQPE-------QVIDKLLKCHDWYQIYKDP
        ASK+ A  KIRE   EWEGR  DV FHK W  +  Y+ K+DK   VWG++T+ +++      +  K ++K  PE       ++  KL +C+D+  + KDP
Subjt:  ASKHTATKKIRECFTEWEGRALDVKFHKAWAPIWLYLIKEDKELLVWGEYTLEEIIEIVDTRKKRKKSQKSQPE-------QVIDKLLKCHDWYQIYKDP

Query:  VLRKLAVLSYESIRNLYEDPQT
         L  L +L Y++IRNL+ED Q+
Subjt:  VLRKLAVLSYESIRNLYEDPQT

TrEMBL top hitse value%identityAlignment
A0A5A7SZR2 Uncharacterized protein5.8e-1840.16Show/hide
Query:  ASKHTATKKIRECFTEWEGRALDVKFHKAWAPIWLYLIKEDKELLVWGEYTLEEIIEIVDTRKKRKKSQKSQPE-------QVIDKLLKCHDWYQIYKDP
        ASK+ A  KIRE   EWEGR  DV FHK W  +  Y+ K+DK   VWG++T+ +++      +  K ++K  PE       ++  KL +C+D+  + KDP
Subjt:  ASKHTATKKIRECFTEWEGRALDVKFHKAWAPIWLYLIKEDKELLVWGEYTLEEIIEIVDTRKKRKKSQKSQPE-------QVIDKLLKCHDWYQIYKDP

Query:  VLRKLAVLSYESIRNLYEDPQT
         L  L +L Y++IRNL+ED Q+
Subjt:  VLRKLAVLSYESIRNLYEDPQT

A0A5C7GNV1 Uncharacterized protein2.3e-1443.14Show/hide
Query:  SKHTATKKIRECFTEWEGRALDVKFHKAWAPIWLYLIKEDKELLVWGEYTLEEIIEIVDTRKKRKKSQKSQPEQVIDKLLKCHDWYQIYKDPVLRKLAVL
        +KH A K IR  F E++G   +V+F K W  +  YL KEDK  LVWGEYT E+I++I +  +  KK      + V+D L KC DW+ IY + VL      
Subjt:  SKHTATKKIRECFTEWEGRALDVKFHKAWAPIWLYLIKEDKELLVWGEYTLEEIIEIVDTRKKRKKSQKSQPEQVIDKLLKCHDWYQIYKDPVLRKLAVL

Query:  SY
        SY
Subjt:  SY

A0A5D3BSH0 Uncharacterized protein5.8e-1840.16Show/hide
Query:  ASKHTATKKIRECFTEWEGRALDVKFHKAWAPIWLYLIKEDKELLVWGEYTLEEIIEIVDTRKKRKKSQKSQPE-------QVIDKLLKCHDWYQIYKDP
        ASK+ A  KIRE   EWEGR  DV FHK W  +  Y+ K+DK   VWG++T+ +++      +  K ++K  PE       ++  KL +C+D+  + KDP
Subjt:  ASKHTATKKIRECFTEWEGRALDVKFHKAWAPIWLYLIKEDKELLVWGEYTLEEIIEIVDTRKKRKKSQKSQPE-------QVIDKLLKCHDWYQIYKDP

Query:  VLRKLAVLSYESIRNLYEDPQT
         L  L +L Y++IRNL+ED Q+
Subjt:  VLRKLAVLSYESIRNLYEDPQT

A0A7N0UNL0 Uncharacterized protein2.1e-1537.17Show/hide
Query:  ASKHTATKKIRECFTEWEGRALDVKFHKAWAPIWLYLIKEDKELLVWGEYTLEEIIEIVDTRKKRKKSQKSQPE-QVIDKLLKCHDWYQIYKDPVLRKLA
        ASK+   KKIR  F EW+GRA+ +  HK W  I  Y+ KED++ +VWGE+T ++I+ I +  KK+K          ++ K+ +  DWYQ+Y+D +L    
Subjt:  ASKHTATKKIRECFTEWEGRALDVKFHKAWAPIWLYLIKEDKELLVWGEYTLEEIIEIVDTRKKRKKSQKSQPE-QVIDKLLKCHDWYQIYKDPVLRKLA

Query:  VLSYESIRNLYED
        +     ++  YED
Subjt:  VLSYESIRNLYED

B9T9Z5 Uncharacterized protein6.0e-1539.29Show/hide
Query:  ASKHTATKKIRECFTEWEGRALDVKFHKAWAPIWLYLIKEDKELLVWGEYTLEEIIEIVDTRKKRKKSQKSQPEQVIDKLLKCHDWYQIYKDPVLRKLAV
        AS++TA K IR    E++G   DVKFH+ W  +  Y+ KEDK  +VWGEY+L++I+EI    + R  +  +        L KC+DWY++Y+   L+   +
Subjt:  ASKHTATKKIRECFTEWEGRALDVKFHKAWAPIWLYLIKEDKELLVWGEYTLEEIIEIVDTRKKRKKSQKSQPEQVIDKLLKCHDWYQIYKDPVLRKLAV

Query:  LSYESIRNLYED
          Y +IRN++ED
Subjt:  LSYESIRNLYED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGGGGTATGCCTCCAAGCATACTGCCACTAAGAAGATAAGAGAGTGCTTTACCGAGTGGGAGGGCAGAGCACTCGATGTGAAATTTCACAAGGCCTGGGCTCCCAT
ATGGTTGTATCTCATCAAAGAAGATAAGGAGCTGCTTGTCTGGGGGGAATACACATTAGAAGAAATAATAGAAATTGTAGACACTAGGAAAAAGCGCAAGAAGTCTCAGA
AGAGTCAGCCAGAGCAAGTCATAGACAAGCTTCTCAAATGTCACGATTGGTACCAAATCTATAAGGATCCGGTCTTAAGGAAGCTTGCCGTGCTGTCCTATGAGAGCATT
CGGAATCTATACGAGGATCCGCAGACCTTCTGGAAAGTCGCCTATGGAAAGAGCATACCCAACCAATATGAGCCTGTCCGAGACTTGCCATTCCCATGGAAGAGAGTTTC
CCTGCGTATTGATTCATTACCGACTGAACGGGAAATGCTTGCTTCTATTCTTTCTCTCCGAGCGATGAACCGTGGTTGTCTAGCTGTACGGAATCCCTGGGGAGTGAAGG
GATAG
mRNA sequenceShow/hide mRNA sequence
ATGCGGGGGTATGCCTCCAAGCATACTGCCACTAAGAAGATAAGAGAGTGCTTTACCGAGTGGGAGGGCAGAGCACTCGATGTGAAATTTCACAAGGCCTGGGCTCCCAT
ATGGTTGTATCTCATCAAAGAAGATAAGGAGCTGCTTGTCTGGGGGGAATACACATTAGAAGAAATAATAGAAATTGTAGACACTAGGAAAAAGCGCAAGAAGTCTCAGA
AGAGTCAGCCAGAGCAAGTCATAGACAAGCTTCTCAAATGTCACGATTGGTACCAAATCTATAAGGATCCGGTCTTAAGGAAGCTTGCCGTGCTGTCCTATGAGAGCATT
CGGAATCTATACGAGGATCCGCAGACCTTCTGGAAAGTCGCCTATGGAAAGAGCATACCCAACCAATATGAGCCTGTCCGAGACTTGCCATTCCCATGGAAGAGAGTTTC
CCTGCGTATTGATTCATTACCGACTGAACGGGAAATGCTTGCTTCTATTCTTTCTCTCCGAGCGATGAACCGTGGTTGTCTAGCTGTACGGAATCCCTGGGGAGTGAAGG
GATAG
Protein sequenceShow/hide protein sequence
MRGYASKHTATKKIRECFTEWEGRALDVKFHKAWAPIWLYLIKEDKELLVWGEYTLEEIIEIVDTRKKRKKSQKSQPEQVIDKLLKCHDWYQIYKDPVLRKLAVLSYESI
RNLYEDPQTFWKVAYGKSIPNQYEPVRDLPFPWKRVSLRIDSLPTEREMLASILSLRAMNRGCLAVRNPWGVKG