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MS028532 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028532
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPaO domain-containing protein
Genome locationscaffold29:261537..262107
RNA-Seq ExpressionMS028532
SyntenyMS028532
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0010277 - chlorophyllide a oxygenase [overall] activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8542968.1 hypothetical protein F0562_024108 [Nyssa sinensis]2.7e-0687.5Show/hide
Query:  RRCR----DVTIIAKALALPCVLVSSIPETPLSSNRFAML
        R CR    DVTIIAKALALPCVLVSSIPETPLSSNRFAML
Subjt:  RRCR----DVTIIAKALALPCVLVSSIPETPLSSNRFAML
TrEMBL top hitse value%identityAlignment
A0A5J5BK17 PaO domain-containing protein1.3e-0687.5Show/hide
Query:  RRCR----DVTIIAKALALPCVLVSSIPETPLSSNRFAML
        R CR    DVTIIAKALALPCVLVSSIPETPLSSNRFAML
Subjt:  RRCR----DVTIIAKALALPCVLVSSIPETPLSSNRFAML
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCAAGACATCAGCTTTCTTCNCTCTGCCTCCCGGCCTCTCACTTCGTTTCGTTCTTCTTCTCTTGAGTCGCTTGAGCGGAAGCGGCAAATCGCTTCTACCGAGTT
CCCCAACAGCATGATGAGTCGAATCATCTTCTTTCTCAATCCACCTCCTAACGCTGTAAGGCGTTGTCGTGATGTCACTATCATTGCTAAGGCTCTGGCCCTTCCTTGTG
TTCTTGTTTCTTCCATTCCGGAGACCCCTCTTTCCTCGAATCGTTTCGCAATGCTTGTATTCATACTATCGTCCGTGCACATGCACACAAATTCAGAATTTTGTGCTTCA
AAAACTCTATCAATTAGTGTTTCCTTGAAACACTTGATTTTACTCGGATTTAAGATAGCGGTTGGATCCACCTCTAAAATGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACCAAGACATCAGCTTTCTTCNCTCTGCCTCCCGGCCTCTCACTTCGTTTCGTTCTTCTTCTCTTGAGTCGCTTGAGCGGAAGCGGCAAATCGCTTCTACCGAGTT
CCCCAACAGCATGATGAGTCGAATCATCTTCTTTCTCAATCCACCTCCTAACGCTGTAAGGCGTTGTCGTGATGTCACTATCATTGCTAAGGCTCTGGCCCTTCCTTGTG
TTCTTGTTTCTTCCATTCCGGAGACCCCTCTTTCCTCGAATCGTTTCGCAATGCTTGTATTCATACTATCGTCCGTGCACATGCACACAAATTCAGAATTTTGTGCTTCA
AAAACTCTATCAATTAGTGTTTCCTTGAAACACTTGATTTTACTCGGATTTAAGATAGCGGTTGGATCCACCTCTAAAATGAATTGA
Protein sequenceShow/hide protein sequence
MNQDISFLXSASRPLTSFRSSSLESLERKRQIASTEFPNSMMSRIIFFLNPPPNAVRRCRDVTIIAKALALPCVLVSSIPETPLSSNRFAMLVFILSSVHMHTNSEFCAS
KTLSISVSLKHLILLGFKIAVGSTSKMN