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MS028537 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028537
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold29:296023..296301
RNA-Seq ExpressionMS028537
SyntenyMS028537
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB5511269.1 hypothetical protein DKX38_030064 [Salix brachista]5.8e-3783.5Show/hide
Query:  MAAPARNHRGS--------AVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGFIIL---DPGRASGFHSHHHIDDKSPR
        MAAPARNH           A RSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDG IIL   DPGRASGFHSHHHID KSPR
Subjt:  MAAPARNHRGS--------AVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGFIIL---DPGRASGFHSHHHIDDKSPR

Query:  APP
        APP
Subjt:  APP

KAF3452218.1 hypothetical protein FNV43_RR08316 [Rhamnella rubrinervis]4.1e-3582.65Show/hide
Query:  MAAPARNHR--------GSAVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGFIIL---DPGRASGFHSHHHIDDKS
        MAAPARNH+        GSAVR APIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVT I+G IIL   DPGRASGFHSHHHIDDK+
Subjt:  MAAPARNHR--------GSAVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGFIIL---DPGRASGFHSHHHIDDKS

KAG6585906.1 hypothetical protein SDJN03_18639, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3587.78Show/hide
Query:  APARNHRGSAVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGFIILDPGRASGFHSHHHIDDKSPRAPP
        A     RG A RSAPIRITLGGLSLLPD +RYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDG IILDPGRASGFHSHHHID+KSPRAPP
Subjt:  APARNHRGSAVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGFIILDPGRASGFHSHHHIDDKSPRAPP

PNS22340.1 hypothetical protein POPTR_T152800 [Populus trichocarpa]3.2e-3580.58Show/hide
Query:  MAAPARNHRGS--------AVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGFIIL---DPGRASGFHSHHHIDDKSPR
        MAAPARNH           A RSAPIRITLGGLSLLPDLERYYESSV DSIAAA+WFT TTKKSHAYVTVIDG IIL   DPGRASGFHSHHHID KSPR
Subjt:  MAAPARNHRGS--------AVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGFIIL---DPGRASGFHSHHHIDDKSPR

Query:  APP
        APP
Subjt:  APP

YP_009941491.1 hypothetical protein [Fagus sylvatica]2.0e-3783.5Show/hide
Query:  MAAPARNHR--------GSAVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGFIIL---DPGRASGFHSHHHIDDKSPR
        MAAPARNHR        GSAVR APIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVT+ DGFIIL   DP RASGFHSHHHID+KSPR
Subjt:  MAAPARNHR--------GSAVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGFIIL---DPGRASGFHSHHHIDDKSPR

Query:  APP
        A P
Subjt:  APP

TrEMBL top hitse value%identityAlignment
A0A2N9JB91 Uncharacterized protein1.8e-3683.84Show/hide
Query:  MAAPARNHR--------GSAVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGFIIL---DPGRASGFHSHHHIDDKSP
        MAAPARNHR        GSAVR APIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVT+ DGFIIL   DP RASGFHSHHHID+KSP
Subjt:  MAAPARNHR--------GSAVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGFIIL---DPGRASGFHSHHHIDDKSP

A0A5N5IVC1 Uncharacterized protein2.8e-3783.5Show/hide
Query:  MAAPARNHRGS--------AVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGFIIL---DPGRASGFHSHHHIDDKSPR
        MAAPARNH           A RSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDG IIL   DPGRASGFHSHHHID KSPR
Subjt:  MAAPARNHRGS--------AVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGFIIL---DPGRASGFHSHHHIDDKSPR

Query:  APP
        APP
Subjt:  APP

A0A6M2EB46 Uncharacterized protein2.8e-3783.5Show/hide
Query:  MAAPARNHRGS--------AVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGFIIL---DPGRASGFHSHHHIDDKSPR
        MAAPARNH           A RSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDG IIL   DPGRASGFHSHHHID KSPR
Subjt:  MAAPARNHRGS--------AVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGFIIL---DPGRASGFHSHHHIDDKSPR

Query:  APP
        APP
Subjt:  APP

A0A6N2KU69 Uncharacterized protein2.8e-3783.5Show/hide
Query:  MAAPARNHRGS--------AVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGFIIL---DPGRASGFHSHHHIDDKSPR
        MAAPARNH           A RSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDG IIL   DPGRASGFHSHHHID KSPR
Subjt:  MAAPARNHRGS--------AVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGFIIL---DPGRASGFHSHHHIDDKSPR

Query:  APP
        APP
Subjt:  APP

A0A7L7T775 Uncharacterized protein9.6e-3883.5Show/hide
Query:  MAAPARNHR--------GSAVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGFIIL---DPGRASGFHSHHHIDDKSPR
        MAAPARNHR        GSAVR APIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVT+ DGFIIL   DP RASGFHSHHHID+KSPR
Subjt:  MAAPARNHR--------GSAVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGFIIL---DPGRASGFHSHHHIDDKSPR

Query:  APP
        A P
Subjt:  APP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTCCAGCTCGCAACCACAGGGGCTCAGCGGTCAGGTCCGCCCCCATTCGAATTACGTTAGGAGGTCTTTCGCTTTTGCCAGATCTAGAGAGATACTACGAGTC
CTCCGTCCCAGATTCCATCGCCGCGGCCATCTGGTTCACCGGTACTACCAAAAAGTCTCATGCTTACGTTACTGTTATTGATGGTTTTATTATCTTGGACCCCGGTCGTG
CTTCTGGTTTCCATTCCCATCATCATATTGATGATAAATCTCCTCGTGCTCCGCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCTCCAGCTCGCAACCACAGGGGCTCAGCGGTCAGGTCCGCCCCCATTCGAATTACGTTAGGAGGTCTTTCGCTTTTGCCAGATCTAGAGAGATACTACGAGTC
CTCCGTCCCAGATTCCATCGCCGCGGCCATCTGGTTCACCGGTACTACCAAAAAGTCTCATGCTTACGTTACTGTTATTGATGGTTTTATTATCTTGGACCCCGGTCGTG
CTTCTGGTTTCCATTCCCATCATCATATTGATGATAAATCTCCTCGTGCTCCGCCATAA
Protein sequenceShow/hide protein sequence
MAAPARNHRGSAVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGFIILDPGRASGFHSHHHIDDKSPRAPP