; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS028539 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028539
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionORF116A protein
Genome locationscaffold29:300322..300672
RNA-Seq ExpressionMS028539
SyntenyMS028539
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBB05375.1 ORF116A protein [Turritis glabra]2.8e-5289.66Show/hide
Query:  MSDPFPCRSWPYHSVPDGQRGIRYSSSRSVALRVPAGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTGRAGALRSFFLCGTMPGREGNASRRRTTRLQLN
        MSDPFPCRSWPYHSVPDGQRGIRYSSSRS A     GH+LAVGSMVPKVTSVRQFRLNSSLYVSGPT RAGA RSFFLCGTMPGREGNASRRRTT  QL+
Subjt:  MSDPFPCRSWPYHSVPDGQRGIRYSSSRSVALRVPAGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTGRAGALRSFFLCGTMPGREGNASRRRTTRLQLN

Query:  FGFSLHEMSPVHWTDG
        FGFSLHEMSPVHWTDG
Subjt:  FGFSLHEMSPVHWTDG

CAE5979190.1 unnamed protein product [Arabidopsis arenosa]1.6e-4788.29Show/hide
Query:  PCRSWPYHSVPDGQRGIRYSSSRSVALRVPAGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTGRAGALRSFFLCGTMPGREGNASRRRTTRLQLNFGFSL
        P RSWPYHSVPDGQRGIRYSSSRS A     GH+LAVGSMVPKVTSVRQFRLNSSLYVSGPT RAGA RSFFLCGTMPGREGNASRRRTT  QL+FGFSL
Subjt:  PCRSWPYHSVPDGQRGIRYSSSRSVALRVPAGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTGRAGALRSFFLCGTMPGREGNASRRRTTRLQLNFGFSL

Query:  HEMSPVHWTDG
        HEMSPVHWTDG
Subjt:  HEMSPVHWTDG

KAB8468464.1 hypothetical protein FH972_025298 [Carpinus fangiana]7.3e-3773.11Show/hide
Query:  MSDPFPCRSWPYHSVPDGQRGIRYSSSRSVALRVP--AGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTGRAGALRSFFLCGTMPGREGNASRRRTTRLQ
        MSDPFP         P    G R ++   +    P   GHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTGRAGALRSFFLCGTMPGREGNASRRRTT  Q
Subjt:  MSDPFPCRSWPYHSVPDGQRGIRYSSSRSVALRVP--AGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTGRAGALRSFFLCGTMPGREGNASRRRTTRLQ

Query:  LN-FGFSLHEMSPVHWTDG
        L+ FGFSLHEMSPVHWTDG
Subjt:  LN-FGFSLHEMSPVHWTDG

KAG2251041.1 hypothetical protein Bca52824_081177 [Brassica carinata]7.8e-4787.39Show/hide
Query:  PCRSWPYHSVPDGQRGIRYSSSRSVALRVPAGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTGRAGALRSFFLCGTMPGREGNASRRRTTRLQLNFGFSL
        P RSWPYHSVPDGQRGIRYSSSRS A     GH+LAVGSMVPKVTSVRQFRLNSSLYVSGP  RAGA RSFFLCGTMPGREGNASRRRTT  QL+FGFSL
Subjt:  PCRSWPYHSVPDGQRGIRYSSSRSVALRVPAGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTGRAGALRSFFLCGTMPGREGNASRRRTTRLQLNFGFSL

Query:  HEMSPVHWTDG
        HEMSPVHWTDG
Subjt:  HEMSPVHWTDG

YP_004927459.1 orf116 [Brassica oleracea]1.4e-5188.79Show/hide
Query:  MSDPFPCRSWPYHSVPDGQRGIRYSSSRSVALRVPAGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTGRAGALRSFFLCGTMPGREGNASRRRTTRLQLN
        MSDPFPCRSWPYHSVPDGQRGIRYSSSRS A     GH+LAVGSMVPKVTSVRQFRLNSSLYVSGP  RAGA RSFFLCGTMPGREGNASRRRTT  QL+
Subjt:  MSDPFPCRSWPYHSVPDGQRGIRYSSSRSVALRVPAGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTGRAGALRSFFLCGTMPGREGNASRRRTTRLQLN

Query:  FGFSLHEMSPVHWTDG
        FGFSLHEMSPVHWTDG
Subjt:  FGFSLHEMSPVHWTDG

TrEMBL top hitse value%identityAlignment
A0A5H2UXV7 ORF116A protein1.3e-5289.66Show/hide
Query:  MSDPFPCRSWPYHSVPDGQRGIRYSSSRSVALRVPAGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTGRAGALRSFFLCGTMPGREGNASRRRTTRLQLN
        MSDPFPCRSWPYHSVPDGQRGIRYSSSRS A     GH+LAVGSMVPKVTSVRQFRLNSSLYVSGPT RAGA RSFFLCGTMPGREGNASRRRTT  QL+
Subjt:  MSDPFPCRSWPYHSVPDGQRGIRYSSSRSVALRVPAGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTGRAGALRSFFLCGTMPGREGNASRRRTTRLQLN

Query:  FGFSLHEMSPVHWTDG
        FGFSLHEMSPVHWTDG
Subjt:  FGFSLHEMSPVHWTDG

G4XYD3 Orf1166.6e-5288.79Show/hide
Query:  MSDPFPCRSWPYHSVPDGQRGIRYSSSRSVALRVPAGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTGRAGALRSFFLCGTMPGREGNASRRRTTRLQLN
        MSDPFPCRSWPYHSVPDGQRGIRYSSSRS A     GH+LAVGSMVPKVTSVRQFRLNSSLYVSGP  RAGA RSFFLCGTMPGREGNASRRRTT  QL+
Subjt:  MSDPFPCRSWPYHSVPDGQRGIRYSSSRSVALRVPAGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTGRAGALRSFFLCGTMPGREGNASRRRTTRLQLN

Query:  FGFSLHEMSPVHWTDG
        FGFSLHEMSPVHWTDG
Subjt:  FGFSLHEMSPVHWTDG

G4XYU7 Orf1166.6e-5288.79Show/hide
Query:  MSDPFPCRSWPYHSVPDGQRGIRYSSSRSVALRVPAGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTGRAGALRSFFLCGTMPGREGNASRRRTTRLQLN
        MSDPFPCRSWPYHSVPDGQRGIRYSSSRS A     GH+LAVGSMVPKVTSVRQFRLNSSLYVSGP  RAGA RSFFLCGTMPGREGNASRRRTT  QL+
Subjt:  MSDPFPCRSWPYHSVPDGQRGIRYSSSRSVALRVPAGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTGRAGALRSFFLCGTMPGREGNASRRRTTRLQLN

Query:  FGFSLHEMSPVHWTDG
        FGFSLHEMSPVHWTDG
Subjt:  FGFSLHEMSPVHWTDG

Q6YSM9 ORF1166.6e-5288.79Show/hide
Query:  MSDPFPCRSWPYHSVPDGQRGIRYSSSRSVALRVPAGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTGRAGALRSFFLCGTMPGREGNASRRRTTRLQLN
        MSDPFPCRSWPYHSVPDGQRGIRYSSSRS A     GH+LAVGSMVPKVTSVRQFRLNSSLYVSGP  RAGA RSFFLCGTMPGREGNASRRRTT  QL+
Subjt:  MSDPFPCRSWPYHSVPDGQRGIRYSSSRSVALRVPAGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTGRAGALRSFFLCGTMPGREGNASRRRTTRLQLN

Query:  FGFSLHEMSPVHWTDG
        FGFSLHEMSPVHWTDG
Subjt:  FGFSLHEMSPVHWTDG

R4I220 Uncharacterized protein6.6e-5288.79Show/hide
Query:  MSDPFPCRSWPYHSVPDGQRGIRYSSSRSVALRVPAGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTGRAGALRSFFLCGTMPGREGNASRRRTTRLQLN
        MSDPFPCRSWPYHSVPDGQRGIRYSSSRS A     GH+LAVGSMVPKVTSVRQFRLNSSLYVSGP  RAGA RSFFLCGTMPGREGNASRRRTT  QL+
Subjt:  MSDPFPCRSWPYHSVPDGQRGIRYSSSRSVALRVPAGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTGRAGALRSFFLCGTMPGREGNASRRRTTRLQLN

Query:  FGFSLHEMSPVHWTDG
        FGFSLHEMSPVHWTDG
Subjt:  FGFSLHEMSPVHWTDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGATCCGTTCCCCTGCAGATCATGGCCTTACCACTCGGTCCCCGATGGCCAGCGGGGGATTCGGTATAGCAGCTCACGTTCGGTTGCGCTGCGCGTTCCCGCTGG
ACACGTGTTAGCTGTAGGAAGTATGGTTCCGAAAGTGACTTCGGTTCGCCAGTTCAGGCTCAACTCCTCGCTTTACGTTAGCGGACCCACAGGTCGGGCCGGGGCTCTGC
GCTCTTTCTTTCTGTGTGGGACGATGCCGGGGAGAGAAGGGAATGCGTCGAGGCGGCGAACAACAAGACTACAACTCAATTTTGGCTTTTCCCTCCACGAGATGAGCCCA
GTGCATTGGACCGATGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGATCCGTTCCCCTGCAGATCATGGCCTTACCACTCGGTCCCCGATGGCCAGCGGGGGATTCGGTATAGCAGCTCACGTTCGGTTGCGCTGCGCGTTCCCGCTGG
ACACGTGTTAGCTGTAGGAAGTATGGTTCCGAAAGTGACTTCGGTTCGCCAGTTCAGGCTCAACTCCTCGCTTTACGTTAGCGGACCCACAGGTCGGGCCGGGGCTCTGC
GCTCTTTCTTTCTGTGTGGGACGATGCCGGGGAGAGAAGGGAATGCGTCGAGGCGGCGAACAACAAGACTACAACTCAATTTTGGCTTTTCCCTCCACGAGATGAGCCCA
GTGCATTGGACCGATGGATAA
Protein sequenceShow/hide protein sequence
MSDPFPCRSWPYHSVPDGQRGIRYSSSRSVALRVPAGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTGRAGALRSFFLCGTMPGREGNASRRRTTRLQLNFGFSLHEMSP
VHWTDG