CuGenDBv2

Gene ID	MS028540
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	NADH-ubiquinone oxidoreductase chain 4
Genome location	scaffold29:301162..301677
RNA-Seq Expression	MS028540
Synteny	MS028540
Gene Ontology terms	GO:0042773 - ATP synthesis coupled electron transport (biological process) GO:0009507 - chloroplast (cellular component) GO:0009579 - thylakoid (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0031966 - mitochondrial membrane (cellular component) GO:0070469 - respirasome (cellular component) GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
InterPro domains	IPR001750 - NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit IPR003918 - NADH:ubiquinone oxidoreductase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

BBN68045.1 hypothetical protein Prudu_263S000300, partial [Prunus dulcis]

6.9e-84

98.25

Show/hide

Query:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI
        MLLAILLILLQTGTTDLQISLTTEF ERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGI LKLGTHGFLRFSIPMFPEATLCSTPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY
        YT SAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY

KAA0033212.1 NADH dehydrogenase subunit 4 [Cucumis melo var. makuwa]

1.1e-84

98.25

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Query:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI
        MLLAILLILLQTGTTDLQISLTTEF ERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIP+FPEATLC+TPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY
        YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY

KAG6621657.1 hypothetical protein I3842_Q007400, partial [Carya illinoinensis]

5.3e-84

98.25

Show/hide

Query:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI
        MLLAILLILLQTGTTDLQISLTTEF ERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGI  KLGTHGFLRFSIPMFPEATLCSTPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY
        YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY

TXG46252.1 hypothetical protein EZV62_028283 [Acer yangbiense]

5.3e-84

98.25

Show/hide

Query:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI
        MLLAILLILLQTGTTDLQISLTTEF ERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGI  KLGTHGFLRFSIPMFPEATLCSTPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY
        YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY

TXG46259.1 hypothetical protein EZV62_028290 [Acer yangbiense]

5.3e-84

98.25

Show/hide

Query:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI
        MLLAILLILLQTGTTDLQISLTTEF ERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGI  KLGTHGFLRFSIPMFPEATLCSTPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY
        YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY

TrEMBL top hits

e value

%identity

Alignment

A0A2P6P133 Putative NADH:ubiquinone reductase (H(+)-translocating)

3.3e-84

98.25

Show/hide

Query:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI
        MLLAILLILLQTGTTDLQISLTTEF ERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGI LKLGTHGFLRFSIPMFPEATLCSTPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY
        YT SAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY

A0A5A7SPU7 NADH dehydrogenase subunit 4 (Mitochondrion)

5.1e-85

98.25

Show/hide

Query:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI
        MLLAILLILLQTGTTDLQISLTTEF ERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIP+FPEATLC+TPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY
        YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY

A0A5C7GP56 Proton_antipo_M domain-containing protein

2.5e-84

98.25

Show/hide

Query:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI
        MLLAILLILLQTGTTDLQISLTTEF ERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGI  KLGTHGFLRFSIPMFPEATLCSTPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY
        YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY

A0A5C7GPL9 Proton_antipo_M domain-containing protein

2.5e-84

98.25

Show/hide

Query:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI
        MLLAILLILLQTGTTDLQISLTTEF ERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGI  KLGTHGFLRFSIPMFPEATLCSTPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY
        YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY

A0A5C7GR23 Proton_antipo_M domain-containing protein

2.5e-84

98.25

Show/hide

Query:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI
        MLLAILLILLQTGTTDLQISLTTEF ERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGI  KLGTHGFLRFSIPMFPEATLCSTPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY
        YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY

SwissProt top hits

e value

%identity

Alignment

P26848 NADH-ubiquinone oxidoreductase chain 4

1.0e-61

90.14

Show/hide

Query:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI
        MLLAIL I  QTGTTDLQI LTTEF ERRQI LWIA FASF+VKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGT+GFLRFSIPMFPEATL  TPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFS
        YTLS IAIIYTSLTT RQIDLKKIIAYSSVAHMN VTIGMFS
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFS

P27572 NADH-ubiquinone oxidoreductase chain 4

1.1e-65

95.07

Show/hide

Query:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI
        MLLAILLILLQTGTTDLQI LTTEF ERRQI LWIA FASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGT+GFLRFSIPMFPEATLC TPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFS
        YTLSAIAIIYTSLTT RQIDLKKIIAYSSVAHMNLVTIGMFS
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFS

P93313 NADH-ubiquinone oxidoreductase chain 4

2.0e-65

94.37

Show/hide

Query:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI
        MLLAILLIL QTGTTDLQI LTTEF ERRQIFLWIA FASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLK GT+GFLRFSIPMFPEATLC TPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFS
        YTLSAIAIIYTSLTT RQIDLKKIIAYSSVAHMNLVTIGMFS
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFS

Q04050 NADH-ubiquinone oxidoreductase chain 4

4.2e-68

97.18

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Query:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI
        MLLAILLIL QTGTTDLQISLTTEF ERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGI LK GTHGFLRFSIPMFPEATLCSTPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFS
        YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFS
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFS

Q37617 NADH-ubiquinone oxidoreductase chain 4

2.9e-53

76.92

Show/hide

Query:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI
        MLLAILLI  QTGT D+++   ++F E RQ  LW+A FASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGT+GFLRFSIP+FP A +  TP I
Subjt:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSR
        YT+S IAI+YTS TT RQIDLKKIIAYSSVAHMN VTIG+FS+
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSR

Arabidopsis top hits

e value

%identity

Alignment

ATCG01050.1 NADH-Ubiquinone/plastoquinone (complex I) protein

2.2e-19

37.59

Show/hide

Query:  LLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFIY
        +L I L      T +L++     +    +I  +I    +FAVK P++P+H WLP+ H EA  +  ++LAGILLK+G +G +R ++ + P A    +P++ 
Subjt:  LLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFIY

Query:  TLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFS
         +  I IIY + T+  Q +LKK IAYSSV+HM  + IG+ S
Subjt:  TLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFS

ATMG00580.1 NADH dehydrogenase subunit 4

3.0e-69

97.18

Show/hide

Query:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI
        MLLAILLIL QTGTTDLQISLTTEF ERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGI LK GTHGFLRFSIPMFPEATLCSTPFI
Subjt:  MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFI

Query:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFS
        YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFS
Subjt:  YTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCTATTAGCTATTCTGTTGATTCTTCTCCAAACAGGAACCACCGATTTACAAATATCATTAACCACAGAATTTTGTGAGCGGCGCCAAATCTTTCTATGGATTGCTTC
TTTCGCCTCTTTCGCCGTCAAAGTGCCTATGGTACCAGTTCATATTTGGTTACCCGAAGCTCATGTAGAGGCACCTACGGCAGGATCCGTCATCTTGGCAGGAATTCTTT
TAAAATTGGGAACCCACGGGTTTTTAAGATTTTCAATACCCATGTTTCCCGAAGCGACACTTTGTTCCACTCCTTTCATTTATACTCTAAGCGCGATTGCTATAATATAT
ACTTCCTTGACCACTTCAAGACAGATCGATCTTAAGAAGATCATTGCTTACTCCTCAGTAGCCCATATGAATCTGGTGACTATTGGTATGTTTAGTCGGGCGGCGGCCGT
TAGGTCACCTATTTTGAGTTATGGACACACAAGGCCAAAACATGTGTGCCGGGCGTGCGACCCATCAACCTACTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MLLAILLILLQTGTTDLQISLTTEFCERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCSTPFIYTLSAIAIIY
TSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGHTRPKHVCRACDPSTY

MS028540 (gene) of Bitter gourd (TR) v1 genome