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MS028543 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028543
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNADH-ubiquinone oxidoreductase chain 2
Genome locationscaffold29:323414..324404
RNA-Seq ExpressionMS028543
SyntenyMS028543
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0009579 - thylakoid (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN64512.1 hypothetical protein VITISV_004351 [Vitis vinifera]3.1e-2291.8Show/hide
Query:  MGMHAPKDRVESDTSTVYSISLYEATITTRDEPWFGELKLALGVIGLPVTARDRILRLTGP
        MGMHA KDRVESDTSTVYSISLYE+TITTRDEPWFGELKLALGVIGLPVTARDRILR + P
Subjt:  MGMHAPKDRVESDTSTVYSISLYEATITTRDEPWFGELKLALGVIGLPVTARDRILRLTGP
GAY67613.1 hypothetical protein CUMW_257950 [Citrus unshiu]1.4e-2287.69Show/hide
Query:  MGMHAPKDRVESDTSTVYSISLYEATITTRDEPWFGELKLALGVIGLPVTARDRILRLTGPYGES
        MGMHA KDRVESDTSTVYSISLYE+TITTRDEPWFGELKLALGVIGLPVTARDRILR + P  E+
Subjt:  MGMHAPKDRVESDTSTVYSISLYEATITTRDEPWFGELKLALGVIGLPVTARDRILRLTGPYGES
KAG9157566.1 hypothetical protein Leryth_022773 [Lithospermum erythrorhizon]1.8e-2275.64Show/hide
Query:  MGMHAPKDRVESDTSTVYSISLYEATITTRDEPWFGELKLALGVIGLPVTARDRILRLTGPYGESGASRSTVERKMLG
        MGMHA KDRVESDTSTVYSISLYE+TITTRDEPWFGELKLALGVIGLPVTARDRIL+ + P   +  +  +  RKM G
Subjt:  MGMHAPKDRVESDTSTVYSISLYEATITTRDEPWFGELKLALGVIGLPVTARDRILRLTGPYGESGASRSTVERKMLG
QHN82242.1 NADH-ubiquinone oxidoreductase chain [Arachis hypogaea]3.1e-2276.54Show/hide
Query:  MGMHAPKDRVESDTSTVYSISLYEATITTRDEPWFGELKLALGVIGLPVTARDRILRLTGPYGESGASRSTVE-RKMLGPS
        MGMHA KDRVESDTSTVYSISLYE+TITTRDEPWFGELKLALGV GLPVTARDRILR + P    G +R+    RKM GP+
Subjt:  MGMHAPKDRVESDTSTVYSISLYEATITTRDEPWFGELKLALGVIGLPVTARDRILRLTGPYGESGASRSTVE-RKMLGPS
QHN95483.1 NADH-ubiquinone oxidoreductase chain [Arachis hypogaea]3.1e-2276.54Show/hide
Query:  MGMHAPKDRVESDTSTVYSISLYEATITTRDEPWFGELKLALGVIGLPVTARDRILRLTGPYGESGASRSTVE-RKMLGPS
        MGMHA KDRVESDTSTVYSISLYE+TITTRDEPWFGELKLALGV GLPVTARDRILR + P    G +R+    RKM GP+
Subjt:  MGMHAPKDRVESDTSTVYSISLYEATITTRDEPWFGELKLALGVIGLPVTARDRILRLTGPYGESGASRSTVE-RKMLGPS
TrEMBL top hitse value%identityAlignment
A0A0D2NAB2 Proton_antipo_M domain-containing protein4.4e-2290.16Show/hide
Query:  MGMHAPKDRVESDTSTVYSISLYEATITTRDEPWFGELKLALGVIGLPVTARDRILRLTGP
        MGMHA KDRVESDTSTVYSISL+E+TITTRDEPWFGELKLALGVIGLPVTARDRILR + P
Subjt:  MGMHAPKDRVESDTSTVYSISLYEATITTRDEPWFGELKLALGVIGLPVTARDRILRLTGP
A0A2H5QSQ3 Uncharacterized protein6.8e-2387.69Show/hide
Query:  MGMHAPKDRVESDTSTVYSISLYEATITTRDEPWFGELKLALGVIGLPVTARDRILRLTGPYGES
        MGMHA KDRVESDTSTVYSISLYE+TITTRDEPWFGELKLALGVIGLPVTARDRILR + P  E+
Subjt:  MGMHAPKDRVESDTSTVYSISLYEATITTRDEPWFGELKLALGVIGLPVTARDRILRLTGPYGES
A0A6N2AH75 Uncharacterized protein3.4e-2290.16Show/hide
Query:  MGMHAPKDRVESDTSTVYSISLYEATITTRDEPWFGELKLALGVIGLPVTARDRILRLTGP
        MGMHA KDRVESDTSTVYSISLYE+T+TTRDEPWFGELKLALGVIGLPVTARDRILR + P
Subjt:  MGMHAPKDRVESDTSTVYSISLYEATITTRDEPWFGELKLALGVIGLPVTARDRILRLTGP
A5AFS5 Proton_antipo_M domain-containing protein1.5e-2291.8Show/hide
Query:  MGMHAPKDRVESDTSTVYSISLYEATITTRDEPWFGELKLALGVIGLPVTARDRILRLTGP
        MGMHA KDRVESDTSTVYSISLYE+TITTRDEPWFGELKLALGVIGLPVTARDRILR + P
Subjt:  MGMHAPKDRVESDTSTVYSISLYEATITTRDEPWFGELKLALGVIGLPVTARDRILRLTGP
M1BVN5 NADH-ubiquinone oxidoreductase chain 23.4e-2290.16Show/hide
Query:  MGMHAPKDRVESDTSTVYSISLYEATITTRDEPWFGELKLALGVIGLPVTARDRILRLTGP
        MGMHA KDRVESDTSTVYSISLYE+T+TTRDEPWFGELKLALGVIGLPVTARDRILR + P
Subjt:  MGMHAPKDRVESDTSTVYSISLYEATITTRDEPWFGELKLALGVIGLPVTARDRILRLTGP
SwissProt top hitse value%identityAlignment
P15688 NADH-ubiquinone oxidoreductase chain 26.5e-1582.61Show/hide
Query:  TVYSISLYEATITTRDEPWFGELKLALGVIGLPVTARDRILRLTGP
        +VYSISLYE+TITTRDEPWFGE +LALGVIGLPVTA DRILR + P
Subjt:  TVYSISLYEATITTRDEPWFGELKLALGVIGLPVTARDRILRLTGP
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATGCATGCTCCGAAAGATAGGGTCGAGTCTGATACATCAACCGTCTACTCAATATCCTTGTACGAGGCCACAATCACTACACGAGATGAACCTTGGTTTGGTGA
ATTGAAGTTGGCCTTAGGTGTAATAGGACTCCCAGTTACTGCGCGCGATCGTATACTGAGGCTAACGGGGCCTTACGGGGAGAGTGGAGCCTCAAGAAGCACTGTTGAGA
GGAAGATGCTTGGCCCCTCTTCATTCTCTACAGGGTTCCAAACCTTTCTTCAACATAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATGCATGCTCCGAAAGATAGGGTCGAGTCTGATACATCAACCGTCTACTCAATATCCTTGTACGAGGCCACAATCACTACACGAGATGAACCTTGGTTTGGTGA
ATTGAAGTTGGCCTTAGGTGTAATAGGACTCCCAGTTACTGCGCGCGATCGTATACTGAGGCTAACGGGGCCTTACGGGGAGAGTGGAGCCTCAAGAAGCACTGTTGAGA
GGAAGATGCTTGGCCCCTCTTCATTCTCTACAGGGTTCCAAACCTTTCTTCAACATAGGTGA
Protein sequenceShow/hide protein sequence
MGMHAPKDRVESDTSTVYSISLYEATITTRDEPWFGELKLALGVIGLPVTARDRILRLTGPYGESGASRSTVERKMLGPSSFSTGFQTFLQHR