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MS028545 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028545
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNADH-ubiquinone oxidoreductase chain 2
Genome locationscaffold29:328824..329129
RNA-Seq ExpressionMS028545
SyntenyMS028545
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF24045.1 conserved hypothetical protein [Ricinus communis]1.4e-0791.18Show/hide
Query:  EKLVMIAMNAAFEDVYKKVFADSYQHGAPLSRGA
        +K+VMIAMNAA EDVYKKVFADSYQHGAPLSRGA
Subjt:  EKLVMIAMNAAFEDVYKKVFADSYQHGAPLSRGA
KAG8362757.1 hypothetical protein BUALT_BualtUnG0039200 [Buddleja alternifolia]2.4e-0794.12Show/hide
Query:  EKLVMIAMNAAFEDVYKKVFADSYQHGAPLSRGA
        EKLVMIAMNAA EDVYKKVFADSYQHGA LSRGA
Subjt:  EKLVMIAMNAAFEDVYKKVFADSYQHGAPLSRGA
KJB09758.1 hypothetical protein B456_001G164800, partial [Gossypium raimondii]1.2e-0694.29Show/hide
Query:  EKLVMIAMNAAFEDV-YKKVFADSYQHGAPLSRGA
        EK VMIAMNAAFEDV YKKVFADSYQHGAPLSRGA
Subjt:  EKLVMIAMNAAFEDV-YKKVFADSYQHGAPLSRGA
KZM91154.1 hypothetical protein DCAR_021481 [Daucus carota subsp. sativus]1.1e-0796.97Show/hide
Query:  EKLVMIAMNAAFEDVYKKVFADSYQHGAPLSRG
        EKLVMIAMNAA EDVYKKVFADSYQHGAPLSRG
Subjt:  EKLVMIAMNAAFEDVYKKVFADSYQHGAPLSRG
XP_016652391.1 PREDICTED: NADH-ubiquinone oxidoreductase chain 2 [Prunus mume]2.6e-0690.62Show/hide
Query:  EKLVMIAMNAAFEDVYKKVFADSYQHGAPLSR
        +KLVMIAMNAA EDVYK+VFADSYQHGAPLSR
Subjt:  EKLVMIAMNAAFEDVYKKVFADSYQHGAPLSR
TrEMBL top hitse value%identityAlignment
A0A0D2NA98 Uncharacterized protein (Fragment)5.7e-0794.29Show/hide
Query:  EKLVMIAMNAAFEDV-YKKVFADSYQHGAPLSRGA
        EK VMIAMNAAFEDV YKKVFADSYQHGAPLSRGA
Subjt:  EKLVMIAMNAAFEDV-YKKVFADSYQHGAPLSRGA
A0A164W1F3 Uncharacterized protein5.1e-0896.97Show/hide
Query:  EKLVMIAMNAAFEDVYKKVFADSYQHGAPLSRG
        EKLVMIAMNAA EDVYKKVFADSYQHGAPLSRG
Subjt:  EKLVMIAMNAAFEDVYKKVFADSYQHGAPLSRG
A0A2U1PN00 Uncharacterized protein4.1e-0593.1Show/hide
Query:  EKLVMIAMNAAFEDVYKKVFADSYQHGAP
        EKLVMIA NAA EDVYKKVFADSYQHGAP
Subjt:  EKLVMIAMNAAFEDVYKKVFADSYQHGAP
A0A6J5WLW5 Uncharacterized protein1.4e-0590Show/hide
Query:  EKLVMIAMNAAFEDVYKKVFADSYQHGAPL
        +KLVMIAMNAA EDVYK+VFADSYQHGAPL
Subjt:  EKLVMIAMNAAFEDVYKKVFADSYQHGAPL
B9TJC0 Uncharacterized protein6.7e-0891.18Show/hide
Query:  EKLVMIAMNAAFEDVYKKVFADSYQHGAPLSRGA
        +K+VMIAMNAA EDVYKKVFADSYQHGAPLSRGA
Subjt:  EKLVMIAMNAAFEDVYKKVFADSYQHGAPLSRGA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCGGCAAAGACCCGCAACTCTCGAAGAGGAAGAGGCCACCAACCGCCCGAATCACTGTAGCAAACCCTCCCTTTACTCAATGGATAGCGCTTTTATCCTCTTTCA
AGGGAAAAAAGAAGAAATGACGGAGAAACTAGTGATGATTGCCATGAATGCAGCCTTCGAGGACGTGTACAAGAAGGTCTTTGCCGATTCCTATCAACATGGTGCACCTC
TCAGTAGAGGGGCCCGTGGAGACTTTGACCGAATGAATAGGGATCAATTTCTCGACATTTTTATTGAGGAAGAGAATCCAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGCGGCAAAGACCCGCAACTCTCGAAGAGGAAGAGGCCACCAACCGCCCGAATCACTGTAGCAAACCCTCCCTTTACTCAATGGATAGCGCTTTTATCCTCTTTCA
AGGGAAAAAAGAAGAAATGACGGAGAAACTAGTGATGATTGCCATGAATGCAGCCTTCGAGGACGTGTACAAGAAGGTCTTTGCCGATTCCTATCAACATGGTGCACCTC
TCAGTAGAGGGGCCCGTGGAGACTTTGACCGAATGAATAGGGATCAATTTCTCGACATTTTTATTGAGGAAGAGAATCCAGGATGA
Protein sequenceShow/hide protein sequence
MQRQRPATLEEEEATNRPNHCSKPSLYSMDSAFILFQGKKEEMTEKLVMIAMNAAFEDVYKKVFADSYQHGAPLSRGARGDFDRMNRDQFLDIFIEEENPG