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MS028547 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028547
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDimer_Tnp_hAT domain-containing protein
Genome locationscaffold29:330256..330597
RNA-Seq ExpressionMS028547
SyntenyMS028547
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4076424.1 unnamed protein product [Lactuca saligna]1.3e-2570.97Show/hide
Query:  EKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKE
        E    G  + ADGEYAAEQPQ LPAVIA  TRWAAQNLELT +SEI+VG R  E+GRLKRR  KCNTTRG+P ACAKEEANQSEWR G E ++
Subjt:  EKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKE

GEW53690.1 NADH dehydrogenase subunit 2, mitochondrial [Tanacetum cinerariifolium]2.0e-2374.7Show/hide
Query:  ADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKE
        ADGEYAAEQ Q LPAVIA  TRWAAQNLELT +SEI+V  R  E+GRLKRR  KCNTTRG+P ACAKEEANQSEWR G E ++
Subjt:  ADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKE

GEY23800.1 hypothetical protein AMTR_s05569p00002680, partial [Tanacetum cinerariifolium]2.6e-2367.01Show/hide
Query:  CFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKERFSSLQA
        C   +  ADGEYAAEQPQ LPAVIA  TRWAAQNLE+T +SEI+VG    E+GRLKRR  KCNTTRG+P ACAKEEANQSEWR  +EA  +  +L A
Subjt:  CFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKERFSSLQA

KAC9566655.1 hypothetical protein E3N88_45625 [Mikania micrantha]9.6e-2676.47Show/hide
Query:  RYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKE
        R ADGEYAAEQPQ LPAVIA  TRWAAQNLELT +SEI+VG R  E+GRLKRR  KCNTTRG+P ACAKEEANQSEWR G E ++
Subjt:  RYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKE

YP_009941458.1 hypothetical protein [Fagus sylvatica]7.3e-4288.57Show/hide
Query:  EKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKERFSSLQA
        +KRCFGSVRYADGEYAAEQPQ LPAVIA  TRW AQNLELTFQSEI+VGSR  EK RLKRRITKCNTTRG+PSACAKEEANQSEWR G EAKERFSSLQA
Subjt:  EKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKERFSSLQA

Query:  ASNNG
        ASNNG
Subjt:  ASNNG

TrEMBL top hitse value%identityAlignment
A0A2N9FGL4 Uncharacterized protein3.6e-4288.57Show/hide
Query:  EKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKERFSSLQA
        +KRCFGSVRYADGEYAAEQPQ LPAVIA  TRW AQNLELTFQSEI+VGSR  EK RLKRRITKCNTTRG+PSACAKEEANQSEWR G EAKERFSSLQA
Subjt:  EKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKERFSSLQA

Query:  ASNNG
        ASNNG
Subjt:  ASNNG

A0A2N9GHD9 Uncharacterized protein3.6e-4288.57Show/hide
Query:  EKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKERFSSLQA
        +KRCFGSVRYADGEYAAEQPQ LPAVIA  TRW AQNLELTFQSEI+VGSR  EK RLKRRITKCNTTRG+PSACAKEEANQSEWR G EAKERFSSLQA
Subjt:  EKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKERFSSLQA

Query:  ASNNG
        ASNNG
Subjt:  ASNNG

A0A5N6L8L8 Uncharacterized protein4.7e-2676.47Show/hide
Query:  RYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKE
        R ADGEYAAEQPQ LPAVIA  TRWAAQNLELT +SEI+VG R  E+GRLKRR  KCNTTRG+P ACAKEEANQSEWR G E ++
Subjt:  RYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKE

A0A6S7LAR3 Uncharacterized protein6.1e-2670.97Show/hide
Query:  EKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKE
        E    G  + ADGEYAAEQPQ LPAVIA  TRWAAQNLELT +SEI+VG R  E+GRLKRR  KCNTTRG+P ACAKEEANQSEWR G E ++
Subjt:  EKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKE

A0A7L7T4J0 Uncharacterized protein3.6e-4288.57Show/hide
Query:  EKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKERFSSLQA
        +KRCFGSVRYADGEYAAEQPQ LPAVIA  TRW AQNLELTFQSEI+VGSR  EK RLKRRITKCNTTRG+PSACAKEEANQSEWR G EAKERFSSLQA
Subjt:  EKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKERFSSLQA

Query:  ASNNG
        ASNNG
Subjt:  ASNNG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAAAAAAGATGCTTTGGGAGTGTGAGATACGCGGACGGGGAGTACGCAGCCGAACAACCGCAGGAGCTTCCAGCAGTGATAGCTGCCCCCACCAGATGGGCCGC
CCAAAACCTGGAGCTAACATTTCAATCGGAAATCCACGTCGGATCGCGGCGAGACGAAAAAGGCAGACTGAAGCGGAGGATCACAAAATGCAACACAACAAGGGGCAAAC
CAAGCGCTTGCGCGAAAGAAGAAGCGAATCAATCAGAATGGAGACATGGAGAAGAGGCGAAAGAGAGATTTTCGAGCCTGCAAGCTGCAAGCAACAACGGCGGAAAAGCC
GTTGCGCGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGAAAAAAGATGCTTTGGGAGTGTGAGATACGCGGACGGGGAGTACGCAGCCGAACAACCGCAGGAGCTTCCAGCAGTGATAGCTGCCCCCACCAGATGGGCCGC
CCAAAACCTGGAGCTAACATTTCAATCGGAAATCCACGTCGGATCGCGGCGAGACGAAAAAGGCAGACTGAAGCGGAGGATCACAAAATGCAACACAACAAGGGGCAAAC
CAAGCGCTTGCGCGAAAGAAGAAGCGAATCAATCAGAATGGAGACATGGAGAAGAGGCGAAAGAGAGATTTTCGAGCCTGCAAGCTGCAAGCAACAACGGCGGAAAAGCC
GTTGCGCGCTAG
Protein sequenceShow/hide protein sequence
MKEKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKERFSSLQAASNNGGKA
VAR