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MS028548 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028548
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCytochrome c oxidase subunit 2
Genome locationscaffold29:331050..331349
RNA-Seq ExpressionMS028548
SyntenyMS028548
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:1902600 - proton transmembrane transport (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0070469 - respirasome (cellular component)
GO:0004129 - cytochrome-c oxidase activity (molecular function)
GO:0005507 - copper ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AGC78983.1 hypothetical protein [Vicia faba]2.8e-4590.91Show/hide
Query:  MRVPCCSPLPEAKDGVEPSFQDLQSDTFPLCYLAKPATSCAKVKRLFFLPRSLFFYICGGGRSTRHDRRRVTIEEGTTSFSLALLHFPLMIESSKPLHY
        M+VPCCSPLPEAKDGVEPSFQDLQSDTFPLCY AKPATSCAKVKRLFFLPRSLFFYICGGGRSTR+DRRRVT EEGTT  SLALLHFP +I SSKPLHY
Subjt:  MRVPCCSPLPEAKDGVEPSFQDLQSDTFPLCYLAKPATSCAKVKRLFFLPRSLFFYICGGGRSTRHDRRRVTIEEGTTSFSLALLHFPLMIESSKPLHY
QCD83512.1 hypothetical protein DEO72_LG2g3857 [Vigna unguiculata]6.2e-3783Show/hide
Query:  MRVPCCSPLPEAKDGVEPSFQDLQSDTFPLCYLAKPATSCAKVKRLFFLPRSLFFYICGGGRSTRHDRRRVTIEEGTTSFSL-ALLHFPLMIESSKPLHY
        ++V C SPLP+AKDGVEPSFQDLQSDTFPLCY AKPATSCAKVKRLFFLPRSL FYIC  GRST +DRRRVT EEGTTSFSL ALLHF  +IES KPLHY
Subjt:  MRVPCCSPLPEAKDGVEPSFQDLQSDTFPLCYLAKPATSCAKVKRLFFLPRSLFFYICGGGRSTRHDRRRVTIEEGTTSFSL-ALLHFPLMIESSKPLHY
RDY13467.1 hypothetical protein CR513_01586, partial [Mucuna pruriens]1.9e-4189.69Show/hide
Query:  VPCCSPLPEAKDGVEPSFQDLQSDTFPLCYLAKPATSCAKVKRLFFLPRSLFFYICGGGRSTRHDRRRVTIEEGTTSFSLALLHFPLMIESSKPLHY
        VPCCSPLPEAKDGVEPSFQDLQSDTFPLCY AKPATSCAKVKRLFFLPRSLFFYIC  GRST +DRRRVT EEGTTSFSLALLHF  +IES KPLHY
Subjt:  VPCCSPLPEAKDGVEPSFQDLQSDTFPLCYLAKPATSCAKVKRLFFLPRSLFFYICGGGRSTRHDRRRVTIEEGTTSFSLALLHFPLMIESSKPLHY
YP_007516862.1 hypothetical protein GlmaxMp13 [Glycine max]7.6e-4388.89Show/hide
Query:  MRVPCCSPLPEAKDGVEPSFQDLQSDTFPLCYLAKPATSCAKVKRLFFLPRSLFFYICGGGRSTRHDRRRVTIEEGTTSFSLALLHFPLMIESSKPLHY
        ++VPCCSPLPEAKDGVEPSFQDLQSDTFPLCY AKPATSCAKVKRLFFLPRSLFFYIC  GRST +DRRRVT EEGTTSFSLALLHFP +IES KPLHY
Subjt:  MRVPCCSPLPEAKDGVEPSFQDLQSDTFPLCYLAKPATSCAKVKRLFFLPRSLFFYICGGGRSTRHDRRRVTIEEGTTSFSLALLHFPLMIESSKPLHY
YP_009526540.1 hypothetical protein [Ammopiptanthus mongolicus]7.3e-4691.92Show/hide
Query:  MRVPCCSPLPEAKDGVEPSFQDLQSDTFPLCYLAKPATSCAKVKRLFFLPRSLFFYICGGGRSTRHDRRRVTIEEGTTSFSLALLHFPLMIESSKPLHY
        M VPCCSPLPEAKDGVEPSFQDLQSDTFPLCY AKPATSCAKVKRLFFLPRSLFFYICGGGRST +DRRRVT EEG TSFSLALLHFP +IESSKPLHY
Subjt:  MRVPCCSPLPEAKDGVEPSFQDLQSDTFPLCYLAKPATSCAKVKRLFFLPRSLFFYICGGGRSTRHDRRRVTIEEGTTSFSLALLHFPLMIESSKPLHY
TrEMBL top hitse value%identityAlignment
A0A371IEK0 Uncharacterized protein (Fragment)9.1e-4289.69Show/hide
Query:  VPCCSPLPEAKDGVEPSFQDLQSDTFPLCYLAKPATSCAKVKRLFFLPRSLFFYICGGGRSTRHDRRRVTIEEGTTSFSLALLHFPLMIESSKPLHY
        VPCCSPLPEAKDGVEPSFQDLQSDTFPLCY AKPATSCAKVKRLFFLPRSLFFYIC  GRST +DRRRVT EEGTTSFSLALLHF  +IES KPLHY
Subjt:  VPCCSPLPEAKDGVEPSFQDLQSDTFPLCYLAKPATSCAKVKRLFFLPRSLFFYICGGGRSTRHDRRRVTIEEGTTSFSLALLHFPLMIESSKPLHY
A0A385G272 Uncharacterized protein3.6e-4691.92Show/hide
Query:  MRVPCCSPLPEAKDGVEPSFQDLQSDTFPLCYLAKPATSCAKVKRLFFLPRSLFFYICGGGRSTRHDRRRVTIEEGTTSFSLALLHFPLMIESSKPLHY
        M VPCCSPLPEAKDGVEPSFQDLQSDTFPLCY AKPATSCAKVKRLFFLPRSLFFYICGGGRST +DRRRVT EEG TSFSLALLHFP +IESSKPLHY
Subjt:  MRVPCCSPLPEAKDGVEPSFQDLQSDTFPLCYLAKPATSCAKVKRLFFLPRSLFFYICGGGRSTRHDRRRVTIEEGTTSFSLALLHFPLMIESSKPLHY
A0A4D6L4Q6 Uncharacterized protein3.0e-3783Show/hide
Query:  MRVPCCSPLPEAKDGVEPSFQDLQSDTFPLCYLAKPATSCAKVKRLFFLPRSLFFYICGGGRSTRHDRRRVTIEEGTTSFSL-ALLHFPLMIESSKPLHY
        ++V C SPLP+AKDGVEPSFQDLQSDTFPLCY AKPATSCAKVKRLFFLPRSL FYIC  GRST +DRRRVT EEGTTSFSL ALLHF  +IES KPLHY
Subjt:  MRVPCCSPLPEAKDGVEPSFQDLQSDTFPLCYLAKPATSCAKVKRLFFLPRSLFFYICGGGRSTRHDRRRVTIEEGTTSFSL-ALLHFPLMIESSKPLHY
M1FIW5 Uncharacterized protein3.7e-4388.89Show/hide
Query:  MRVPCCSPLPEAKDGVEPSFQDLQSDTFPLCYLAKPATSCAKVKRLFFLPRSLFFYICGGGRSTRHDRRRVTIEEGTTSFSLALLHFPLMIESSKPLHY
        ++VPCCSPLPEAKDGVEPSFQDLQSDTFPLCY AKPATSCAKVKRLFFLPRSLFFYIC  GRST +DRRRVT EEGTTSFSLALLHFP +IES KPLHY
Subjt:  MRVPCCSPLPEAKDGVEPSFQDLQSDTFPLCYLAKPATSCAKVKRLFFLPRSLFFYICGGGRSTRHDRRRVTIEEGTTSFSLALLHFPLMIESSKPLHY
R4IV49 Uncharacterized protein1.3e-4590.91Show/hide
Query:  MRVPCCSPLPEAKDGVEPSFQDLQSDTFPLCYLAKPATSCAKVKRLFFLPRSLFFYICGGGRSTRHDRRRVTIEEGTTSFSLALLHFPLMIESSKPLHY
        M+VPCCSPLPEAKDGVEPSFQDLQSDTFPLCY AKPATSCAKVKRLFFLPRSLFFYICGGGRSTR+DRRRVT EEGTT  SLALLHFP +I SSKPLHY
Subjt:  MRVPCCSPLPEAKDGVEPSFQDLQSDTFPLCYLAKPATSCAKVKRLFFLPRSLFFYICGGGRSTRHDRRRVTIEEGTTSFSLALLHFPLMIESSKPLHY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTTCCGTGCTGCTCGCCACTCCCCGAGGCCAAGGACGGGGTCGAACCGTCATTCCAGGATTTGCAGTCCGATACATTTCCATTATGTTACCTAGCCAAACCCGC
CACCTCATGTGCCAAAGTCAAACGGTTGTTCTTCCTTCCCCGCTCCCTCTTTTTCTACATATGCGGTGGCGGGCGGAGCACTCGTCATGACCGGCGGCGGGTTACCATAG
AAGAGGGGACAACTTCTTTCTCCCTTGCCTTGCTCCATTTTCCTTTGATGATTGAAAGTAGCAAGCCACTCCACTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGTTCCGTGCTGCTCGCCACTCCCCGAGGCCAAGGACGGGGTCGAACCGTCATTCCAGGATTTGCAGTCCGATACATTTCCATTATGTTACCTAGCCAAACCCGC
CACCTCATGTGCCAAAGTCAAACGGTTGTTCTTCCTTCCCCGCTCCCTCTTTTTCTACATATGCGGTGGCGGGCGGAGCACTCGTCATGACCGGCGGCGGGTTACCATAG
AAGAGGGGACAACTTCTTTCTCCCTTGCCTTGCTCCATTTTCCTTTGATGATTGAAAGTAGCAAGCCACTCCACTACTAG
Protein sequenceShow/hide protein sequence
MRVPCCSPLPEAKDGVEPSFQDLQSDTFPLCYLAKPATSCAKVKRLFFLPRSLFFYICGGGRSTRHDRRRVTIEEGTTSFSLALLHFPLMIESSKPLHY