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MS028549 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028549
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDimer_Tnp_hAT domain-containing protein
Genome locationscaffold29:331568..332125
RNA-Seq ExpressionMS028549
SyntenyMS028549
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4076424.1 unnamed protein product [Lactuca saligna]2.7e-2570.97Show/hide
Query:  EKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKE
        E    G  + ADGEYAAEQPQ LPAVIA  TRWAAQNLELT +SEI+VG R  E+GRLKRR  KCNTTRG+P ACAKEEANQSEWR G E ++
Subjt:  EKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKE

GEW53690.1 NADH dehydrogenase subunit 2, mitochondrial [Tanacetum cinerariifolium]3.3e-2374.7Show/hide
Query:  ADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKE
        ADGEYAAEQ Q LPAVIA  TRWAAQNLELT +SEI+V  R  E+GRLKRR  KCNTTRG+P ACAKEEANQSEWR G E ++
Subjt:  ADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKE

GEY23800.1 hypothetical protein AMTR_s05569p00002680, partial [Tanacetum cinerariifolium]4.3e-2367.01Show/hide
Query:  CFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKERFSSLQA
        C   +  ADGEYAAEQPQ LPAVIA  TRWAAQNLE+T +SEI+VG    E+GRLKRR  KCNTTRG+P ACAKEEANQSEWR  +EA  +  +L A
Subjt:  CFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKERFSSLQA

KAC9566655.1 hypothetical protein E3N88_45625 [Mikania micrantha]1.6e-2576.47Show/hide
Query:  RYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKE
        R ADGEYAAEQPQ LPAVIA  TRWAAQNLELT +SEI+VG R  E+GRLKRR  KCNTTRG+P ACAKEEANQSEWR G E ++
Subjt:  RYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKE

YP_009941458.1 hypothetical protein [Fagus sylvatica]4.6e-4978.72Show/hide
Query:  PEGHTSGAPPGNIEMHEADLYLESKEKCRKGKLNMKEKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITK
        P+ H S  PP NI +HEADL++E K + RK K  +K KRCFGSVRYADGEYAAEQPQ LPAVIA  TRW AQNLELTFQSEI+VGSR  EK RLKRRITK
Subjt:  PEGHTSGAPPGNIEMHEADLYLESKEKCRKGKLNMKEKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITK

Query:  CNTTRGKPSACAKEEANQSEWRHGEEAKERFSSLQAASNNG
        CNTTRG+PSACAKEEANQSEWR G EAKERFSSLQAASNNG
Subjt:  CNTTRGKPSACAKEEANQSEWRHGEEAKERFSSLQAASNNG

TrEMBL top hitse value%identityAlignment
A0A2N9FGL4 Uncharacterized protein2.2e-4978.72Show/hide
Query:  PEGHTSGAPPGNIEMHEADLYLESKEKCRKGKLNMKEKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITK
        P+ H S  PP NI +HEADL++E K + RK K  +K KRCFGSVRYADGEYAAEQPQ LPAVIA  TRW AQNLELTFQSEI+VGSR  EK RLKRRITK
Subjt:  PEGHTSGAPPGNIEMHEADLYLESKEKCRKGKLNMKEKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITK

Query:  CNTTRGKPSACAKEEANQSEWRHGEEAKERFSSLQAASNNG
        CNTTRG+PSACAKEEANQSEWR G EAKERFSSLQAASNNG
Subjt:  CNTTRGKPSACAKEEANQSEWRHGEEAKERFSSLQAASNNG

A0A2N9GHD9 Uncharacterized protein2.2e-4978.72Show/hide
Query:  PEGHTSGAPPGNIEMHEADLYLESKEKCRKGKLNMKEKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITK
        P+ H S  PP NI +HEADL++E K + RK K  +K KRCFGSVRYADGEYAAEQPQ LPAVIA  TRW AQNLELTFQSEI+VGSR  EK RLKRRITK
Subjt:  PEGHTSGAPPGNIEMHEADLYLESKEKCRKGKLNMKEKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITK

Query:  CNTTRGKPSACAKEEANQSEWRHGEEAKERFSSLQAASNNG
        CNTTRG+PSACAKEEANQSEWR G EAKERFSSLQAASNNG
Subjt:  CNTTRGKPSACAKEEANQSEWRHGEEAKERFSSLQAASNNG

A0A5N6L8L8 Uncharacterized protein7.6e-2676.47Show/hide
Query:  RYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKE
        R ADGEYAAEQPQ LPAVIA  TRWAAQNLELT +SEI+VG R  E+GRLKRR  KCNTTRG+P ACAKEEANQSEWR G E ++
Subjt:  RYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKE

A0A6S7LAR3 Uncharacterized protein1.3e-2570.97Show/hide
Query:  EKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKE
        E    G  + ADGEYAAEQPQ LPAVIA  TRWAAQNLELT +SEI+VG R  E+GRLKRR  KCNTTRG+P ACAKEEANQSEWR G E ++
Subjt:  EKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKE

A0A7L7T4J0 Uncharacterized protein2.2e-4978.72Show/hide
Query:  PEGHTSGAPPGNIEMHEADLYLESKEKCRKGKLNMKEKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITK
        P+ H S  PP NI +HEADL++E K + RK K  +K KRCFGSVRYADGEYAAEQPQ LPAVIA  TRW AQNLELTFQSEI+VGSR  EK RLKRRITK
Subjt:  PEGHTSGAPPGNIEMHEADLYLESKEKCRKGKLNMKEKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITK

Query:  CNTTRGKPSACAKEEANQSEWRHGEEAKERFSSLQAASNNG
        CNTTRG+PSACAKEEANQSEWR G EAKERFSSLQAASNNG
Subjt:  CNTTRGKPSACAKEEANQSEWRHGEEAKERFSSLQAASNNG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGAGAGAAAGAGTTAGACTTCTATATTGCGTTGCGAAGAGAGATCGAAGACGAAGATTTTCTGACGCAGTGTGGGCACTGGATGGAAAAGACAGAGAAGAGAACAA
CCCACCGGAAGGGCATACCTCAGGAGCACCCCCGGGAAACATCGAGATGCACGAAGCCGACCTATATCTCGAATCGAAAGAAAAATGCAGGAAAGGAAAATTAAATATGA
AAGAAAAAAGATGCTTTGGGAGTGTGAGATACGCGGACGGGGAGTACGCAGCCGAACAACCGCAGGAGCTTCCAGCAGTGATAGCTGCCCCCACCAGATGGGCCGCCCAA
AACCTGGAGCTAACATTTCAATCGGAAATCCACGTCGGATCGCGGCGAGACGAAAAAGGCAGACTGAAGCGGAGGATCACAAAATGCAACACAACAAGGGGCAAACCAAG
CGCTTGCGCGAAAGAAGAAGCGAATCAATCAGAATGGAGACATGGAGAAGAGGCGAAAGAGAGATTTTCGAGCCTGCAAGCTGCAAGCAACAACGGCGGAAAAGCCGTTG
CGCGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCGAGAGAAAGAGTTAGACTTCTATATTGCGTTGCGAAGAGAGATCGAAGACGAAGATTTTCTGACGCAGTGTGGGCACTGGATGGAAAAGACAGAGAAGAGAACAA
CCCACCGGAAGGGCATACCTCAGGAGCACCCCCGGGAAACATCGAGATGCACGAAGCCGACCTATATCTCGAATCGAAAGAAAAATGCAGGAAAGGAAAATTAAATATGA
AAGAAAAAAGATGCTTTGGGAGTGTGAGATACGCGGACGGGGAGTACGCAGCCGAACAACCGCAGGAGCTTCCAGCAGTGATAGCTGCCCCCACCAGATGGGCCGCCCAA
AACCTGGAGCTAACATTTCAATCGGAAATCCACGTCGGATCGCGGCGAGACGAAAAAGGCAGACTGAAGCGGAGGATCACAAAATGCAACACAACAAGGGGCAAACCAAG
CGCTTGCGCGAAAGAAGAAGCGAATCAATCAGAATGGAGACATGGAGAAGAGGCGAAAGAGAGATTTTCGAGCCTGCAAGCTGCAAGCAACAACGGCGGAAAAGCCGTTG
CGCGCTAG
Protein sequenceShow/hide protein sequence
MPRERVRLLYCVAKRDRRRRFSDAVWALDGKDREENNPPEGHTSGAPPGNIEMHEADLYLESKEKCRKGKLNMKEKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQ
NLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKERFSSLQAASNNGGKAVAR