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MS028550 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028550
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProton_antipo_M domain-containing protein
Genome locationscaffold29:332306..333585
RNA-Seq ExpressionMS028550
SyntenyMS028550
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0009579 - thylakoid (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CBL54140.1 hypothetical protein [Beta vulgaris subsp. maritima]5.8e-1393.02Show/hide
Query:  MSAYSCRLDVGHEIHHYTEQITGIHISVKRNYARFARESPSAR
        MSAYSCRLDVGHEIHHYTEQITGIHISVK+N ARF+RESPSAR
Subjt:  MSAYSCRLDVGHEIHHYTEQITGIHISVKRNYARFARESPSAR

EXB98289.1 hypothetical protein L484_014275 [Morus notabilis]1.8e-1497.67Show/hide
Query:  MSAYSCRLDVGHEIHHYTEQITGIHISVKRNYARFARESPSAR
        MSAYSCRLDVGHEIHHYTEQITGIHISVKRNYARF+RESPSAR
Subjt:  MSAYSCRLDVGHEIHHYTEQITGIHISVKRNYARFARESPSAR

NP_064006.1 orf122 gene product [Beta vulgaris subsp. vulgaris]5.8e-1393.02Show/hide
Query:  MSAYSCRLDVGHEIHHYTEQITGIHISVKRNYARFARESPSAR
        MSAYSCRLDVGHEIHHYTEQITGIHISVK+N ARF+RESPSAR
Subjt:  MSAYSCRLDVGHEIHHYTEQITGIHISVKRNYARFARESPSAR

PHT68651.1 hypothetical protein T459_28138 [Capsicum annuum]1.4e-1982.09Show/hide
Query:  KSNPSGLTPGADPNRKALDGLTASEIKKAAGPMCKTLPRESLSPMRIQKVFGQDKKGTRPLFERDKS
        K   S LTP ADPNRKAL GL ASEIKKAAGPMCKTLPRESLS MRI+KV GQDKKGTRPL  RDKS
Subjt:  KSNPSGLTPGADPNRKALDGLTASEIKKAAGPMCKTLPRESLSPMRIQKVFGQDKKGTRPLFERDKS

YP_006291837.1 orf60 [Daucus carota subsp. sativus]1.3e-1293.02Show/hide
Query:  MSAYSCRLDVGHEIHHYTEQITGIHISVKRNYARFARESPSAR
        MSAYSCRLDVGHEIHHYTEQITGIHISVK N ARF+RESPSAR
Subjt:  MSAYSCRLDVGHEIHHYTEQITGIHISVKRNYARFARESPSAR

TrEMBL top hitse value%identityAlignment
A0A2G2YGD6 Proton_antipo_M domain-containing protein6.8e-2082.09Show/hide
Query:  KSNPSGLTPGADPNRKALDGLTASEIKKAAGPMCKTLPRESLSPMRIQKVFGQDKKGTRPLFERDKS
        K   S LTP ADPNRKAL GL ASEIKKAAGPMCKTLPRESLS MRI+KV GQDKKGTRPL  RDKS
Subjt:  KSNPSGLTPGADPNRKALDGLTASEIKKAAGPMCKTLPRESLSPMRIQKVFGQDKKGTRPLFERDKS

E6ZDZ2 Uncharacterized protein orf1222.8e-1393.02Show/hide
Query:  MSAYSCRLDVGHEIHHYTEQITGIHISVKRNYARFARESPSAR
        MSAYSCRLDVGHEIHHYTEQITGIHISVK+N ARF+RESPSAR
Subjt:  MSAYSCRLDVGHEIHHYTEQITGIHISVKRNYARFARESPSAR

G2XLY7 Uncharacterized protein2.8e-1393.02Show/hide
Query:  MSAYSCRLDVGHEIHHYTEQITGIHISVKRNYARFARESPSAR
        MSAYSCRLDVGHEIHHYTEQITGIHISVK+N ARF+RESPSAR
Subjt:  MSAYSCRLDVGHEIHHYTEQITGIHISVKRNYARFARESPSAR

Q9MFC4 Orf122 protein2.8e-1393.02Show/hide
Query:  MSAYSCRLDVGHEIHHYTEQITGIHISVKRNYARFARESPSAR
        MSAYSCRLDVGHEIHHYTEQITGIHISVK+N ARF+RESPSAR
Subjt:  MSAYSCRLDVGHEIHHYTEQITGIHISVKRNYARFARESPSAR

W9SC77 Uncharacterized protein8.7e-1597.67Show/hide
Query:  MSAYSCRLDVGHEIHHYTEQITGIHISVKRNYARFARESPSAR
        MSAYSCRLDVGHEIHHYTEQITGIHISVKRNYARF+RESPSAR
Subjt:  MSAYSCRLDVGHEIHHYTEQITGIHISVKRNYARFARESPSAR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCGTATTCGTGCCGGTTAGACGTCGGCCATGAAATCCATCACTATACCGAGCAGATCACGGGCATTCACATCTCGGTCAAACGGAACTATGCGCGATTCGCGAG
AGAATCGCCTTCAGCAAGAAAGTCTAGGGAGAGAACTGGAAGAGAGAAGGAAAAAGAGCAAAGGATTTACAAGTCTAATGGGAGAAGAATGGCTGACCTTTTGAAAGAAT
ACAAGGATGCCTTCCAGACTCCAAAATCTAACCCAAGCGGTCTAACCCCCGGGGCGGACCCCAACCGAAAGGCGCTAGACGGACTAACGGCAAGCGAGATAAAGAAAGCA
GCTGGCCCTATGTGTAAAACCTTGCCGCGGGAGAGTCTTTCTCCAATGAGAATCCAGAAAGTTTTTGGGCAAGACAAGAAAGGAACTCGCCCTTTGTTTGAAAGGGATAA
GAGCGGATTGCTGGCGATGACTTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGCGTATTCGTGCCGGTTAGACGTCGGCCATGAAATCCATCACTATACCGAGCAGATCACGGGCATTCACATCTCGGTCAAACGGAACTATGCGCGATTCGCGAG
AGAATCGCCTTCAGCAAGAAAGTCTAGGGAGAGAACTGGAAGAGAGAAGGAAAAAGAGCAAAGGATTTACAAGTCTAATGGGAGAAGAATGGCTGACCTTTTGAAAGAAT
ACAAGGATGCCTTCCAGACTCCAAAATCTAACCCAAGCGGTCTAACCCCCGGGGCGGACCCCAACCGAAAGGCGCTAGACGGACTAACGGCAAGCGAGATAAAGAAAGCA
GCTGGCCCTATGTGTAAAACCTTGCCGCGGGAGAGTCTTTCTCCAATGAGAATCCAGAAAGTTTTTGGGCAAGACAAGAAAGGAACTCGCCCTTTGTTTGAAAGGGATAA
GAGCGGATTGCTGGCGATGACTTGGTGA
Protein sequenceShow/hide protein sequence
MSAYSCRLDVGHEIHHYTEQITGIHISVKRNYARFARESPSARKSRERTGREKEKEQRIYKSNGRRMADLLKEYKDAFQTPKSNPSGLTPGADPNRKALDGLTASEIKKA
AGPMCKTLPRESLSPMRIQKVFGQDKKGTRPLFERDKSGLLAMTW