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MS028552 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028552
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold29:338188..341123
RNA-Seq ExpressionMS028552
SyntenyMS028552
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3452167.1 hypothetical protein FNV43_RR08265 [Rhamnella rubrinervis]4.2e-2485.14Show/hide
Query:  LKIVIIWYESPGYADMVAIQSSGSIVADMITALTHTIVKDRKMEPLNVDVWKMRMQLLLKEQDLFFSFLRKEKP
        LKIVIIWYESPG ADMVAIQSSGS+VADMITALTHTIVK RKMEPLNVDVWKMRMQLLLKEQDL  +  +K  P
Subjt:  LKIVIIWYESPGYADMVAIQSSGSIVADMITALTHTIVKDRKMEPLNVDVWKMRMQLLLKEQDLFFSFLRKEKP
TQE06473.1 hypothetical protein C1H46_007972 [Malus baccata]1.4e-0892.11Show/hide
Query:  MVAIQSSGSIVADMITALTHTIVKDRKMEPLNVDVWKM
        MVAIQSSGS+VADMIT LTHTIVK RKMEPLNVDVWKM
Subjt:  MVAIQSSGSIVADMITALTHTIVKDRKMEPLNVDVWKM
XP_030439504.1 uncharacterized protein LOC115661349 [Syzygium oleosum]1.9e-2988.89Show/hide
Query:  LKIVIIWYESPGYADMVAIQSSGSIVADMITALTHTIVKDRKMEPLNVDVWKMRMQLLLKEQDLFFSFLRKEKPADLALMA
        LKIVIIWYESPG  DMV IQSSGS+VADMITALTHTIVK RK+ P NVDVWKMRMQ LLKEQDLFFSFLRKEKPADLALMA
Subjt:  LKIVIIWYESPGYADMVAIQSSGSIVADMITALTHTIVKDRKMEPLNVDVWKMRMQLLLKEQDLFFSFLRKEKPADLALMA
TrEMBL top hitse value%identityAlignment
A0A540N7F5 Uncharacterized protein7.0e-0992.11Show/hide
Query:  MVAIQSSGSIVADMITALTHTIVKDRKMEPLNVDVWKM
        MVAIQSSGS+VADMIT LTHTIVK RKMEPLNVDVWKM
Subjt:  MVAIQSSGSIVADMITALTHTIVKDRKMEPLNVDVWKM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGGCCGAACCTTTGGCTCTGATACCACTTGTCATGGCGCTAAGTCCTTCAAGCCCACAAACCGCGGCACCCTGCGAACCTAACGGTCCGCTGTAGCAGAGATGC
CAGGTGCGCAGGAACGCCCAACCGGGTTTCCGCCTTCATTTTGTCGTGCTGCTATGATGTAACGTGCAGTCGTCCCGAGGCAGCAGGATGTATGCTAAAGATTGTTATCA
TCTGGTATGAGAGTCCAGGTTATGCAGATATGGTAGCGATACAATCTTCTGGATCTATAGTTGCTGATATGATTACTGCATTAACGCATACGATTGTCAAGGATCGCAAA
ATGGAACCTCTAAATGTAGATGTTTGGAAGATGAGAATGCAGTTGCTTCTCAAAGAACAGGATCTTTTTTTTTCATTCTTGAGAAAAGAGAAGCCCGCAGATCTGGCGCT
AATGGCTTCTTCAATCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGGCCGAACCTTTGGCTCTGATACCACTTGTCATGGCGCTAAGTCCTTCAAGCCCACAAACCGCGGCACCCTGCGAACCTAACGGTCCGCTGTAGCAGAGATGC
CAGGTGCGCAGGAACGCCCAACCGGGTTTCCGCCTTCATTTTGTCGTGCTGCTATGATGTAACGTGCAGTCGTCCCGAGGCAGCAGGATGTATGCTAAAGATTGTTATCA
TCTGGTATGAGAGTCCAGGTTATGCAGATATGGTAGCGATACAATCTTCTGGATCTATAGTTGCTGATATGATTACTGCATTAACGCATACGATTGTCAAGGATCGCAAA
ATGGAACCTCTAAATGTAGATGTTTGGAAGATGAGAATGCAGTTGCTTCTCAAAGAACAGGATCTTTTTTTTTCATTCTTGAGAAAAGAGAAGCCCGCAGATCTGGCGCT
AATGGCTTCTTCAATCAAGTGA
Protein sequenceShow/hide protein sequence
MAWPNLWLUYHLSWRUVLQAHKPRHPANLTVRCSRDARCAGTPNRVSAFILSCCYDVTCSRPEAAGCMLKIVIIWYESPGYADMVAIQSSGSIVADMITALTHTIVKDRK
MEPLNVDVWKMRMQLLLKEQDLFFSFLRKEKPADLALMASSIK