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MS028555 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028555
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNADH-ubiquinone oxidoreductase chain 5
Genome locationscaffold29:352000..353732
RNA-Seq ExpressionMS028555
SyntenyMS028555
Gene Ontology termsGO:0042773 - ATP synthesis coupled electron transport (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4096857.1 unnamed protein product [Lactuca saligna]5.5e-1593.48Show/hide
Query:  VELLIAPIFPVGSLLRQRDNCQNHLTLLLTEQPLDLHFRFGELRQG
        VELLIAPIFPVGSLLRQRDNC NHLTLLLTEQPLD +FRFGELRQG
Subjt:  VELLIAPIFPVGSLLRQRDNCQNHLTLLLTEQPLDLHFRFGELRQG
GER39048.1 RNA-dependent RNA polymerase [Striga asiatica]2.7e-0668.63Show/hide
Query:  SSGGWAVIFVVAGVELGRLAGVVFFRADEVGSVT-----XKAATSHGYSQH
        SSGGWAVIFVVAGVE GRLAGVV FRADEVGSVT      +   SHG  ++
Subjt:  SSGGWAVIFVVAGVELGRLAGVVFFRADEVGSVT-----XKAATSHGYSQH
GFY99289.1 hypothetical protein Acr_13g0006900 [Actinidia rufa]8.8e-0581.08Show/hide
Query:  ESVGSEVGSAISVVDGVEGLQILVELLIAPIFPVGSL
        +SV   VGSAI VVDGVEGLQILVELLIAPIFP G+L
Subjt:  ESVGSEVGSAISVVDGVEGLQILVELLIAPIFPVGSL
TrEMBL top hitse value%identityAlignment
A0A5A7Q2I0 RNA-dependent RNA polymerase1.3e-0668.63Show/hide
Query:  SSGGWAVIFVVAGVELGRLAGVVFFRADEVGSVT-----XKAATSHGYSQH
        SSGGWAVIFVVAGVE GRLAGVV FRADEVGSVT      +   SHG  ++
Subjt:  SSGGWAVIFVVAGVELGRLAGVVFFRADEVGSVT-----XKAATSHGYSQH
A0A6S7N740 Uncharacterized protein2.6e-1593.48Show/hide
Query:  VELLIAPIFPVGSLLRQRDNCQNHLTLLLTEQPLDLHFRFGELRQG
        VELLIAPIFPVGSLLRQRDNC NHLTLLLTEQPLD +FRFGELRQG
Subjt:  VELLIAPIFPVGSLLRQRDNCQNHLTLLLTEQPLDLHFRFGELRQG
A0A7J0FM97 NADH-ubiquinone oxidoreductase chain 54.2e-0581.08Show/hide
Query:  ESVGSEVGSAISVVDGVEGLQILVELLIAPIFPVGSL
        +SV   VGSAI VVDGVEGLQILVELLIAPIFP G+L
Subjt:  ESVGSEVGSAISVVDGVEGLQILVELLIAPIFPVGSL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGNAGTCCTCAACCGAATTTGCTCCATTTTGCTCAGTTGAGGGAGCGGAGGTACGCTCGAGCGGTGGCTGGGCAGTGATCTTTGTGGTAGCGGGGGTCGAACTCGGAAG
GCTGGCCGGGGTTGTGTTCTTCCGAGCGGACGAGGTCGGCTCGGTGACCGNCAAAGCCGCCACCTCCCACGGCTACAGCCAGCACCAGGATGATGAGTCAGTCGGTTCGG
AAGTTGGTTCAGCGATATCTGTCGTCGATGGGGTAGAGGGTCTGCAGATACTCGTCGAGCTCCTCATTGCCCCAATCTTCCCTGTAGGCTCCCTGCTCCGCCAGCGCGAC
AACTGTCAAAATCATTTGACGCTTCTTCTCACTGAGCAGCCCCTCGACTTACACTTCAGGTTTGGGGAGCTCCGGCAGGGGGNTTGA
mRNA sequenceShow/hide mRNA sequence
ATGNAGTCCTCAACCGAATTTGCTCCATTTTGCTCAGTTGAGGGAGCGGAGGTACGCTCGAGCGGTGGCTGGGCAGTGATCTTTGTGGTAGCGGGGGTCGAACTCGGAAG
GCTGGCCGGGGTTGTGTTCTTCCGAGCGGACGAGGTCGGCTCGGTGACCGNCAAAGCCGCCACCTCCCACGGCTACAGCCAGCACCAGGATGATGAGTCAGTCGGTTCGG
AAGTTGGTTCAGCGATATCTGTCGTCGATGGGGTAGAGGGTCTGCAGATACTCGTCGAGCTCCTCATTGCCCCAATCTTCCCTGTAGGCTCCCTGCTCCGCCAGCGCGAC
AACTGTCAAAATCATTTGACGCTTCTTCTCACTGAGCAGCCCCTCGACTTACACTTCAGGTTTGGGGAGCTCCGGCAGGGGGNTTGA
Protein sequenceShow/hide protein sequence
MXSSTEFAPFCSVEGAEVRSSGGWAVIFVVAGVELGRLAGVVFFRADEVGSVTXKAATSHGYSQHQDDESVGSEVGSAISVVDGVEGLQILVELLIAPIFPVGSLLRQRD
NCQNHLTLLLTEQPLDLHFRFGELRQGX