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MS028584 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028584
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionpatatin-like protein 2
Genome locationscaffold357:305277..305615
RNA-Seq ExpressionMS028584
SyntenyMS028584
Gene Ontology termsGO:0016298 - lipase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1220376.1 Patatin-like protein 2 [Morella rubra]5.1e-1147.87Show/hide
Query:  DVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSETNRQALVRFAKLLSHNKR
        DV L ++F+   SE  YLRI ++  +  +  +SVD+ATTKNL  LVK GE+LL KPV++   + +E   ++   SETN +ALVRFAKLLS  +R
Subjt:  DVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSETNRQALVRFAKLLSHNKR

KAG5251292.1 patatin family protein [Salix suchowensis]1.9e-1047.87Show/hide
Query:  DVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSETNRQALVRFAKLLSHNKR
        D  LG +F+   SE  YLRI E+  +  L  ASVD+AT KNLK LVK G++LL KPVS+   + +E  V++     TN +ALV+FAK+LS  K+
Subjt:  DVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSETNRQALVRFAKLLSHNKR

KAG8632591.1 hypothetical protein MANES_18G033422v8 [Manihot esculenta]1.5e-1045.74Show/hide
Query:  DVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSETNRQALVRFAKLLSHNKR
        D  + ++F+   SE+ YLRI ++  S  +  +SVD+AT KNL  LVK GE LL KPVS+   + +E  V + +  ETN +AL+RFAKLLS  +R
Subjt:  DVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSETNRQALVRFAKLLSHNKR

XP_022159387.1 patatin-like protein 2 [Momordica charantia]2.9e-5193.75Show/hide
Query:  MFCYPSQNGDVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSETNRQALVRFAKLLSH
        MFC+PSQNGDV LGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEG+ Y++DAVHKGYPSETNRQALVRFAKLLSH
Subjt:  MFCYPSQNGDVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSETNRQALVRFAKLLSH

Query:  NKRSSSTNNTRT
        NKRSSSTNNT T
Subjt:  NKRSSSTNNTRT

XP_040997731.1 patatin-like protein 2 [Juglans microcarpa x Juglans regia]1.5e-1049Show/hide
Query:  DVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSETNRQALVRFAKLLS---HNKRSSS
        DV L  +FR   SE  YLRI ++  S ++  +SVD+AT+KNL  LVK GE+LL KPV++   + +E  V++   SETN QAL RFAKLLS   H + S S
Subjt:  DVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSETNRQALVRFAKLLS---HNKRSSS

TrEMBL top hitse value%identityAlignment
A0A2I4E9L9 Patatin1.6e-1041.96Show/hide
Query:  MFCYPSQN-GDVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSETNRQALVRFAKLLS
        +FC  S +  DV L  +F+   SE  YLRI ++  + ++  +SVD+ATTKNL  LVK GE+LL KPV++   + +E  + +     TN QAL+RFAKLLS
Subjt:  MFCYPSQN-GDVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSETNRQALVRFAKLLS

Query:  HNKRSSSTNNTR
          +R   +  +R
Subjt:  HNKRSSSTNNTR

A0A6A1W7T7 Patatin2.5e-1147.87Show/hide
Query:  DVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSETNRQALVRFAKLLSHNKR
        DV L ++F+   SE  YLRI ++  +  +  +SVD+ATTKNL  LVK GE+LL KPV++   + +E   ++   SETN +ALVRFAKLLS  +R
Subjt:  DVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSETNRQALVRFAKLLSHNKR

A0A6J1DZQ3 patatin-like protein 21.4e-5193.75Show/hide
Query:  MFCYPSQNGDVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSETNRQALVRFAKLLSH
        MFC+PSQNGDV LGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEG+ Y++DAVHKGYPSETNRQALVRFAKLLSH
Subjt:  MFCYPSQNGDVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSETNRQALVRFAKLLSH

Query:  NKRSSSTNNTRT
        NKRSSSTNNT T
Subjt:  NKRSSSTNNTRT

B9R7G6 Patatin2.7e-1045.74Show/hide
Query:  DVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSETNRQALVRFAKLLSHNKR
        D+ + +LF+   SE  YLRI ++  SE +  ASVD+AT KNL  L K GE LL KPVS+   + +E  + +    ETN +AL+RFAK LS  +R
Subjt:  DVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSETNRQALVRFAKLLSHNKR

B9R7G7 Patatin2.1e-1045Show/hide
Query:  DVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSETNRQALVRFAKLLSHNKRSSSTNN
        D+ +  +F+   SE+ YLRI +E  S+I+  +SVD+AT KNL  LVK GE LL KPVS+   + +E  +      ETN +AL+RFAKLLS  +R    N+
Subjt:  DVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSETNRQALVRFAKLLSHNKRSSSTNN

SwissProt top hitse value%identityAlignment
A2YW91 Patatin-like protein 23.5e-0739.18Show/hide
Query:  DVQLGILFRGTESEAYYLRIHEEVPSEILASA-SVDMATTKNLKRLVKFGEQLLDKPVSKEGML--YIEDAVHKGYPSETNRQALVRFAKLLSHNKR
        D+ LG+LF   + E  YLRI  +   ++  SA S+D  + +N+  LVK GE LLDK VS+  +   +  D   +G    TNR  L +FAK LS  +R
Subjt:  DVQLGILFRGTESEAYYLRIHEEVPSEILASA-SVDMATTKNLKRLVKFGEQLLDKPVSKEGML--YIEDAVHKGYPSETNRQALVRFAKLLSHNKR

O23181 Patatin-like protein 37.9e-0739.58Show/hide
Query:  DVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSE--TNRQALVRFAKLLSHNKR
        D Q  ++F+   SE  YLRI ++     L   SVD++T KN++ LV+ GE LL K VS+  +    ++ H    SE  TN +AL RFAK+LS  ++
Subjt:  DVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSE--TNRQALVRFAKLLSHNKR

O48723 Patatin-like protein 27.1e-0836.17Show/hide
Query:  DVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSETNRQALVRFAKLLSHNKR
        D  L  +FR   SEA Y+RI ++  +    +ASVD+AT +NL  L K G++LL KPV++   + ++   ++     TN  AL++ A +LS  K+
Subjt:  DVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSETNRQALVRFAKLLSHNKR

Q2MY43 Patatin-086.7e-0636.17Show/hide
Query:  DVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSETNRQALVRFAKLLSHNKR
        D  L  +F+   S+  YLR+ E   +    +  +D A+  N++ LV+ GE LL KPVSK+               ET  +AL RFAKLLS  K+
Subjt:  DVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSETNRQALVRFAKLLSHNKR

Q6ZJD3 Patatin-like protein 23.5e-0739.18Show/hide
Query:  DVQLGILFRGTESEAYYLRIHEEVPSEILASA-SVDMATTKNLKRLVKFGEQLLDKPVSKEGML--YIEDAVHKGYPSETNRQALVRFAKLLSHNKR
        D+ LG+LF   + E  YLRI  +   ++  SA S+D  + +N+  LVK GE LLDK VS+  +   +  D   +G    TNR  L +FAK LS  +R
Subjt:  DVQLGILFRGTESEAYYLRIHEEVPSEILASA-SVDMATTKNLKRLVKFGEQLLDKPVSKEGML--YIEDAVHKGYPSETNRQALVRFAKLLSHNKR

Arabidopsis top hitse value%identityAlignment
AT2G26560.1 phospholipase A 2A5.1e-0936.17Show/hide
Query:  DVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSETNRQALVRFAKLLSHNKR
        D  L  +FR   SEA Y+RI ++  +    +ASVD+AT +NL  L K G++LL KPV++   + ++   ++     TN  AL++ A +LS  K+
Subjt:  DVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSETNRQALVRFAKLLSHNKR

AT4G37050.1 PATATIN-like protein 45.6e-0839.58Show/hide
Query:  DVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSE--TNRQALVRFAKLLSHNKR
        D Q  ++F+   SE  YLRI ++     L   SVD++T KN++ LV+ GE LL K VS+  +    ++ H    SE  TN +AL RFAK+LS  ++
Subjt:  DVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSE--TNRQALVRFAKLLSHNKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTGTTATCCTTCACAAAATGGGGATGTACAACTGGGCATCCTTTTTCGAGGTACTGAATCCGAAGCCTATTATCTTCGTATTCACGAAGAAGTGCCCAGTGAAAT
CCTGGCATCAGCATCAGTAGACATGGCCACTACCAAGAATCTTAAGCGACTCGTAAAATTCGGTGAACAATTGTTGGACAAGCCTGTCTCCAAGGAGGGGATGCTTTATA
TAGAGGATGCAGTGCACAAGGGTTACCCCTCTGAAACCAATCGCCAAGCTTTGGTCAGGTTCGCCAAATTGCTCTCACACAACAAAAGGTCTTCTTCTACCAACAACACC
AGAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTGTTATCCTTCACAAAATGGGGATGTACAACTGGGCATCCTTTTTCGAGGTACTGAATCCGAAGCCTATTATCTTCGTATTCACGAAGAAGTGCCCAGTGAAAT
CCTGGCATCAGCATCAGTAGACATGGCCACTACCAAGAATCTTAAGCGACTCGTAAAATTCGGTGAACAATTGTTGGACAAGCCTGTCTCCAAGGAGGGGATGCTTTATA
TAGAGGATGCAGTGCACAAGGGTTACCCCTCTGAAACCAATCGCCAAGCTTTGGTCAGGTTCGCCAAATTGCTCTCACACAACAAAAGGTCTTCTTCTACCAACAACACC
AGAACTTGA
Protein sequenceShow/hide protein sequence
MFCYPSQNGDVQLGILFRGTESEAYYLRIHEEVPSEILASASVDMATTKNLKRLVKFGEQLLDKPVSKEGMLYIEDAVHKGYPSETNRQALVRFAKLLSHNKRSSSTNNT
RT