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MS028626 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028626
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPolyprotein
Genome locationscaffold101:24393..24659
RNA-Seq ExpressionMS028626
SyntenyMS028626
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052109.1 Enzymatic polyprotein [Cucumis melo var. makuwa]1.1e-3276.47Show/hide
Query:  EMKSHYPQPSPPDLGWDDLRHDQRAYDESSIVTWNIDGYSEAQMMNAFQEMMMAATAFSTKKSVLQTAHILISGFSGNLRSWWHN
        +MK+HYPQPSPPDLGWDDL H++R YD  S++TWNIDGYSEAQMMN FQEM++AATA+STKKS  +TA ILI GF+GNLRSWWHN
Subjt:  EMKSHYPQPSPPDLGWDDLRHDQRAYDESSIVTWNIDGYSEAQMMNAFQEMMMAATAFSTKKSVLQTAHILISGFSGNLRSWWHN

KAA0056776.1 Enzymatic polyprotein [Cucumis melo var. makuwa]1.1e-3276.47Show/hide
Query:  EMKSHYPQPSPPDLGWDDLRHDQRAYDESSIVTWNIDGYSEAQMMNAFQEMMMAATAFSTKKSVLQTAHILISGFSGNLRSWWHN
        +MK+HYPQPSPPDLGWDDL H++R YD  S++TWNIDGYSEAQMMN FQEM++AATA+STKKS  +TA ILI GF+GNLRSWWHN
Subjt:  EMKSHYPQPSPPDLGWDDLRHDQRAYDESSIVTWNIDGYSEAQMMNAFQEMMMAATAFSTKKSVLQTAHILISGFSGNLRSWWHN

TYJ97599.1 Enzymatic polyprotein [Cucumis melo var. makuwa]1.1e-3276.47Show/hide
Query:  EMKSHYPQPSPPDLGWDDLRHDQRAYDESSIVTWNIDGYSEAQMMNAFQEMMMAATAFSTKKSVLQTAHILISGFSGNLRSWWHN
        +MK+HYPQPSPPDLGWDDL H++R YD  S++TWNIDGYSEAQMMN FQEM++AATA+STKKS  +TA ILI GF+GNLRSWWHN
Subjt:  EMKSHYPQPSPPDLGWDDLRHDQRAYDESSIVTWNIDGYSEAQMMNAFQEMMMAATAFSTKKSVLQTAHILISGFSGNLRSWWHN

TYJ98087.1 Enzymatic polyprotein [Cucumis melo var. makuwa]1.1e-3276.47Show/hide
Query:  EMKSHYPQPSPPDLGWDDLRHDQRAYDESSIVTWNIDGYSEAQMMNAFQEMMMAATAFSTKKSVLQTAHILISGFSGNLRSWWHN
        +MK+HYPQPSPPDLGWDDL H++R YD  S++TWNIDGYSEAQMMN FQEM++AATA+STKKS  +TA ILI GF+GNLRSWWHN
Subjt:  EMKSHYPQPSPPDLGWDDLRHDQRAYDESSIVTWNIDGYSEAQMMNAFQEMMMAATAFSTKKSVLQTAHILISGFSGNLRSWWHN

XP_022151716.1 uncharacterized protein LOC111019629 [Momordica charantia]1.3e-3887.5Show/hide
Query:  MHTEMKSHYPQPSPPDLGWDDLRHDQRAYDESSIVTWNIDGYSEAQMMNAFQEMMMAATAFSTKKSVLQTAHILISGFSGNLRSWWHN
        MHTE+K+HYP+PSPPD+GWDDLRHDQR YDESSI+TWNIDGYSEAQMMN FQEMMMAATAFSTKK VLQTA ILIS  SGNLRSWWHN
Subjt:  MHTEMKSHYPQPSPPDLGWDDLRHDQRAYDESSIVTWNIDGYSEAQMMNAFQEMMMAATAFSTKKSVLQTAHILISGFSGNLRSWWHN

TrEMBL top hitse value%identityAlignment
A0A5A7UR29 Enzymatic polyprotein5.2e-3376.47Show/hide
Query:  EMKSHYPQPSPPDLGWDDLRHDQRAYDESSIVTWNIDGYSEAQMMNAFQEMMMAATAFSTKKSVLQTAHILISGFSGNLRSWWHN
        +MK+HYPQPSPPDLGWDDL H++R YD  S++TWNIDGYSEAQMMN FQEM++AATA+STKKS  +TA ILI GF+GNLRSWWHN
Subjt:  EMKSHYPQPSPPDLGWDDLRHDQRAYDESSIVTWNIDGYSEAQMMNAFQEMMMAATAFSTKKSVLQTAHILISGFSGNLRSWWHN

A0A5D3BEY3 Enzymatic polyprotein5.2e-3376.47Show/hide
Query:  EMKSHYPQPSPPDLGWDDLRHDQRAYDESSIVTWNIDGYSEAQMMNAFQEMMMAATAFSTKKSVLQTAHILISGFSGNLRSWWHN
        +MK+HYPQPSPPDLGWDDL H++R YD  S++TWNIDGYSEAQMMN FQEM++AATA+STKKS  +TA ILI GF+GNLRSWWHN
Subjt:  EMKSHYPQPSPPDLGWDDLRHDQRAYDESSIVTWNIDGYSEAQMMNAFQEMMMAATAFSTKKSVLQTAHILISGFSGNLRSWWHN

A0A5D3BG41 Enzymatic polyprotein5.2e-3376.47Show/hide
Query:  EMKSHYPQPSPPDLGWDDLRHDQRAYDESSIVTWNIDGYSEAQMMNAFQEMMMAATAFSTKKSVLQTAHILISGFSGNLRSWWHN
        +MK+HYPQPSPPDLGWDDL H++R YD  S++TWNIDGYSEAQMMN FQEM++AATA+STKKS  +TA ILI GF+GNLRSWWHN
Subjt:  EMKSHYPQPSPPDLGWDDLRHDQRAYDESSIVTWNIDGYSEAQMMNAFQEMMMAATAFSTKKSVLQTAHILISGFSGNLRSWWHN

A0A5D3DC89 Uncharacterized protein5.2e-3376.47Show/hide
Query:  EMKSHYPQPSPPDLGWDDLRHDQRAYDESSIVTWNIDGYSEAQMMNAFQEMMMAATAFSTKKSVLQTAHILISGFSGNLRSWWHN
        +MK+HYPQPSPPDLGWDDL H++R YD  S++TWNIDGYSEAQMMN FQEM++AATA+STKKS  +TA ILI GF+GNLRSWWHN
Subjt:  EMKSHYPQPSPPDLGWDDLRHDQRAYDESSIVTWNIDGYSEAQMMNAFQEMMMAATAFSTKKSVLQTAHILISGFSGNLRSWWHN

A0A6J1DFI7 uncharacterized protein LOC1110196296.4e-3987.5Show/hide
Query:  MHTEMKSHYPQPSPPDLGWDDLRHDQRAYDESSIVTWNIDGYSEAQMMNAFQEMMMAATAFSTKKSVLQTAHILISGFSGNLRSWWHN
        MHTE+K+HYP+PSPPD+GWDDLRHDQR YDESSI+TWNIDGYSEAQMMN FQEMMMAATAFSTKK VLQTA ILIS  SGNLRSWWHN
Subjt:  MHTEMKSHYPQPSPPDLGWDDLRHDQRAYDESSIVTWNIDGYSEAQMMNAFQEMMMAATAFSTKKSVLQTAHILISGFSGNLRSWWHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACACGGAAATGAAGAGTCATTATCCTCAACCATCCCCTCCTGACCTAGGATGGGACGATCTCCGCCATGATCAACGTGCTTATGACGAATCGTCAATAGTTACTTG
GAATATCGACGGATATTCTGAAGCTCAAATGATGAATGCTTTTCAAGAAATGATGATGGCAGCTACAGCATTCAGCACCAAAAAGTCGGTTTTACAGACCGCCCATATCT
TAATCTCTGGTTTCTCTGGAAACCTAAGGAGCTGGTGGCATAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCACACGGAAATGAAGAGTCATTATCCTCAACCATCCCCTCCTGACCTAGGATGGGACGATCTCCGCCATGATCAACGTGCTTATGACGAATCGTCAATAGTTACTTG
GAATATCGACGGATATTCTGAAGCTCAAATGATGAATGCTTTTCAAGAAATGATGATGGCAGCTACAGCATTCAGCACCAAAAAGTCGGTTTTACAGACCGCCCATATCT
TAATCTCTGGTTTCTCTGGAAACCTAAGGAGCTGGTGGCATAACTAG
Protein sequenceShow/hide protein sequence
MHTEMKSHYPQPSPPDLGWDDLRHDQRAYDESSIVTWNIDGYSEAQMMNAFQEMMMAATAFSTKKSVLQTAHILISGFSGNLRSWWHN