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MS028748 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028748
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTMV resistance protein N-like
Genome locationscaffold155:391717..392064
RNA-Seq ExpressionMS028748
SyntenyMS028748
Gene Ontology termsGO:0007165 - signal transduction (biological process)
GO:0003953 - NAD+ nucleosidase activity (molecular function)
InterPro domainsIPR000157 - Toll/interleukin-1 receptor homology (TIR) domain
IPR035897 - Toll/interleukin-1 receptor homology (TIR) domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141775.1 TMV resistance protein N-like [Momordica charantia]2.2e-0942.86Show/hide
Query:  STWPPDPLMNNCDVFISFSKRDRQGDFASYLDKALTNVGLITMIDHS---FGDELHQTLENIIQNS-CWIVVLSKDYVADERRLRVLAKIMDCVAETT
        ST PP+      DVFISF   D + +F  +L +AL  +G++T +D      GD+L +     I+ S   IVVLSKDY + +  L+ LAKIMDC++ETT
Subjt:  STWPPDPLMNNCDVFISFSKRDRQGDFASYLDKALTNVGLITMIDHS---FGDELHQTLENIIQNS-CWIVVLSKDYVADERRLRVLAKIMDCVAETT

XP_022141776.1 LOW QUALITY PROTEIN: TMV resistance protein N-like [Momordica charantia]1.7e-0942.86Show/hide
Query:  STWPPDPLMNNCDVFISFSKRDRQGDFASYLDKALTNVGLITMIDHS---FGDELHQTLENIIQNS-CWIVVLSKDYVADERRLRVLAKIMDCVAETT
        ST PP+      DVFISF   D + +F  +L +AL  +G++T +D      GD+L + L   I+ S   IVVLSKDY + +  L+ LAKIMDC+++TT
Subjt:  STWPPDPLMNNCDVFISFSKRDRQGDFASYLDKALTNVGLITMIDHS---FGDELHQTLENIIQNS-CWIVVLSKDYVADERRLRVLAKIMDCVAETT

XP_022141803.1 TMV resistance protein N-like [Momordica charantia]1.3e-4993.1Show/hide
Query:  MRESSSVLMLRRTEASSASELSTWPPDPLMNNCDVFISFSKRDRQGDFASYLDKALTNVGLITMIDHSFGDELHQTLENIIQNS-CWIVVLSKDYVADER
        MRESSSVLM RRTEASSASELSTWP DP MNNCDVFISFSKRD QGDFASYLDKALTNVGLIT IDHSFGDELHQTLENIIQNS CWIVVLSKDY A ER
Subjt:  MRESSSVLMLRRTEASSASELSTWPPDPLMNNCDVFISFSKRDRQGDFASYLDKALTNVGLITMIDHSFGDELHQTLENIIQNS-CWIVVLSKDYVADER

Query:  RLRVLAKIMDCVAETT
        RLRVLAKIMDCVAETT
Subjt:  RLRVLAKIMDCVAETT

XP_022141856.1 toll/interleukin-1 receptor-like protein isoform X1 [Momordica charantia]3.7e-0942.86Show/hide
Query:  SSASEL-STWPPDPLMNNCDVFISFSKRDRQGDFASYLDKALTNVGLITMIDHS---FGDELHQTLENIIQNS-CWIVVLSKDYVADERRLRVLAKIMDC
        SS  E+ ST PP+      DVFISF   D + +F  +L + L  +G++T +D      GD+L + L   I+ S   IVVLSKDY + +  L+ LAKIMDC
Subjt:  SSASEL-STWPPDPLMNNCDVFISFSKRDRQGDFASYLDKALTNVGLITMIDHS---FGDELHQTLENIIQNS-CWIVVLSKDYVADERRLRVLAKIMDC

Query:  VAETT
        ++ETT
Subjt:  VAETT

XP_022141862.1 TMV resistance protein N-like [Momordica charantia]2.9e-0942.86Show/hide
Query:  STWPPDPLMNNCDVFISFSKRDRQGDFASYLDKALTNVGLITMIDHS---FGDELHQTLENIIQNS-CWIVVLSKDYVADERRLRVLAKIMDCVAETT
        ST PP+      DVFISF   D + +F  +L +AL  +G++T +D      GD+L + L   I+ S   IVVLSKDY + +  L+ L KIMDC++ETT
Subjt:  STWPPDPLMNNCDVFISFSKRDRQGDFASYLDKALTNVGLITMIDHS---FGDELHQTLENIIQNS-CWIVVLSKDYVADERRLRVLAKIMDCVAETT

TrEMBL top hitse value%identityAlignment
A0A6J1CJ31 TMV resistance protein N-like1.1e-0942.86Show/hide
Query:  STWPPDPLMNNCDVFISFSKRDRQGDFASYLDKALTNVGLITMIDHS---FGDELHQTLENIIQNS-CWIVVLSKDYVADERRLRVLAKIMDCVAETT
        ST PP+      DVFISF   D + +F  +L +AL  +G++T +D      GD+L +     I+ S   IVVLSKDY + +  L+ LAKIMDC++ETT
Subjt:  STWPPDPLMNNCDVFISFSKRDRQGDFASYLDKALTNVGLITMIDHS---FGDELHQTLENIIQNS-CWIVVLSKDYVADERRLRVLAKIMDCVAETT

A0A6J1CJZ3 toll/interleukin-1 receptor-like protein isoform X21.8e-0942.86Show/hide
Query:  STWPPDPLMNNCDVFISFSKRDRQGDFASYLDKALTNVGLITMIDHS---FGDELHQTLENIIQNS-CWIVVLSKDYVADERRLRVLAKIMDCVAETT
        ST PP+      DVFISF   D + +F  +L + L  +G++T +D      GD+L + L   I+ S   IVVLSKDY + +  L+ LAKIMDC++ETT
Subjt:  STWPPDPLMNNCDVFISFSKRDRQGDFASYLDKALTNVGLITMIDHS---FGDELHQTLENIIQNS-CWIVVLSKDYVADERRLRVLAKIMDCVAETT

A0A6J1CK95 LOW QUALITY PROTEIN: TMV resistance protein N-like8.1e-1042.86Show/hide
Query:  STWPPDPLMNNCDVFISFSKRDRQGDFASYLDKALTNVGLITMIDHS---FGDELHQTLENIIQNS-CWIVVLSKDYVADERRLRVLAKIMDCVAETT
        ST PP+      DVFISF   D + +F  +L +AL  +G++T +D      GD+L + L   I+ S   IVVLSKDY + +  L+ LAKIMDC+++TT
Subjt:  STWPPDPLMNNCDVFISFSKRDRQGDFASYLDKALTNVGLITMIDHS---FGDELHQTLENIIQNS-CWIVVLSKDYVADERRLRVLAKIMDCVAETT

A0A6J1CL15 TMV resistance protein N-like1.4e-0942.86Show/hide
Query:  STWPPDPLMNNCDVFISFSKRDRQGDFASYLDKALTNVGLITMIDHS---FGDELHQTLENIIQNS-CWIVVLSKDYVADERRLRVLAKIMDCVAETT
        ST PP+      DVFISF   D + +F  +L +AL  +G++T +D      GD+L + L   I+ S   IVVLSKDY + +  L+ L KIMDC++ETT
Subjt:  STWPPDPLMNNCDVFISFSKRDRQGDFASYLDKALTNVGLITMIDHS---FGDELHQTLENIIQNS-CWIVVLSKDYVADERRLRVLAKIMDCVAETT

A0A6J1CLL3 TMV resistance protein N-like6.1e-5093.1Show/hide
Query:  MRESSSVLMLRRTEASSASELSTWPPDPLMNNCDVFISFSKRDRQGDFASYLDKALTNVGLITMIDHSFGDELHQTLENIIQNS-CWIVVLSKDYVADER
        MRESSSVLM RRTEASSASELSTWP DP MNNCDVFISFSKRD QGDFASYLDKALTNVGLIT IDHSFGDELHQTLENIIQNS CWIVVLSKDY A ER
Subjt:  MRESSSVLMLRRTEASSASELSTWPPDPLMNNCDVFISFSKRDRQGDFASYLDKALTNVGLITMIDHSFGDELHQTLENIIQNS-CWIVVLSKDYVADER

Query:  RLRVLAKIMDCVAETT
        RLRVLAKIMDCVAETT
Subjt:  RLRVLAKIMDCVAETT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGAATCTTCTTCTGTTTTGATGTTAAGGCGCACGGAGGCATCTTCTGCGTCTGAGTTATCAACTTGGCCGCCGGATCCTCTGATGAACAATTGTGATGTGTTCAT
AAGTTTCAGCAAAAGGGACCGCCAGGGAGATTTCGCTTCTTATTTGGATAAGGCCCTGACTAATGTTGGCCTCATAACTATGATTGACCATAGCTTTGGAGATGAACTCC
ATCAAACGCTAGAGAATATAATCCAAAATTCGTGTTGGATCGTGGTTCTATCAAAAGACTACGTTGCTGACGAGCGGCGGCTGAGAGTGTTGGCCAAGATTATGGATTGT
GTGGCTGAGACGACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGGAATCTTCTTCTGTTTTGATGTTAAGGCGCACGGAGGCATCTTCTGCGTCTGAGTTATCAACTTGGCCGCCGGATCCTCTGATGAACAATTGTGATGTGTTCAT
AAGTTTCAGCAAAAGGGACCGCCAGGGAGATTTCGCTTCTTATTTGGATAAGGCCCTGACTAATGTTGGCCTCATAACTATGATTGACCATAGCTTTGGAGATGAACTCC
ATCAAACGCTAGAGAATATAATCCAAAATTCGTGTTGGATCGTGGTTCTATCAAAAGACTACGTTGCTGACGAGCGGCGGCTGAGAGTGTTGGCCAAGATTATGGATTGT
GTGGCTGAGACGACGTGA
Protein sequenceShow/hide protein sequence
MRESSSVLMLRRTEASSASELSTWPPDPLMNNCDVFISFSKRDRQGDFASYLDKALTNVGLITMIDHSFGDELHQTLENIIQNSCWIVVLSKDYVADERRLRVLAKIMDC
VAETT