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MS028758 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028758
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold155:582117..582892
RNA-Seq ExpressionMS028758
SyntenyMS028758
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5576495.1 hypothetical protein H5410_056629 [Solanum commersonii]6.3e-0443.08Show/hide
Query:  MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIGMGYGPKPTRNKGSSSKYSDEYVESLEARLQK
        MI LKA + S     T +EI++ +LG++S YI G+GYGPKP  N+ ++ + + E  +SLE R +K
Subjt:  MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIGMGYGPKPTRNKGSSSKYSDEYVESLEARLQK

XP_022143616.1 uncharacterized protein LOC111013476 [Momordica charantia]1.5e-4585.25Show/hide
Query:  MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIGMGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEELATQRKANEDQQIATQEQIQKALEAQSQEFN
        MITLKAYHASQGDEKTEEEIMETVLG+RSNY+IGMGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEE+A            TQEQIQKALEAQSQEFN
Subjt:  MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIGMGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEELATQRKANEDQQIATQEQIQKALEAQSQEFN

Query:  RKLLEMQQMFLSGPGSSSNSKE
        RKLLEMQQMFLSG GSSS SK+
Subjt:  RKLLEMQQMFLSGPGSSSNSKE

XP_022148911.1 uncharacterized protein LOC111017461 [Momordica charantia]1.3e-4679.17Show/hide
Query:  MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIGMGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEELATQRKANEDQQIATQEQIQKALEAQSQEFN
        MITLKAYHASQGDEKTEEEIMETVLG+RSNY+IGMGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEE+A            TQEQIQKALEAQSQEFN
Subjt:  MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIGMGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEELATQRKANEDQQIATQEQIQKALEAQSQEFN

Query:  RKLLEMQQMFLSGPGSSSNSKE-RKIWVGVMRLC--VCIEYVCF
        RKLLEMQQMFLSG GSSS SK  R+I   V  LC  V   YVCF
Subjt:  RKLLEMQQMFLSGPGSSSNSKE-RKIWVGVMRLC--VCIEYVCF

XP_022153681.1 uncharacterized protein LOC111021138 [Momordica charantia]9.6e-1397.56Show/hide
Query:  MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIGMGYGPKP
        MITLKA HASQGDEKTEEEIMETVLGRRSNYIIGMGYGPKP
Subjt:  MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIGMGYGPKP

TrEMBL top hitse value%identityAlignment
A0A6J1CQT5 uncharacterized protein LOC1110134767.1e-4685.25Show/hide
Query:  MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIGMGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEELATQRKANEDQQIATQEQIQKALEAQSQEFN
        MITLKAYHASQGDEKTEEEIMETVLG+RSNY+IGMGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEE+A            TQEQIQKALEAQSQEFN
Subjt:  MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIGMGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEELATQRKANEDQQIATQEQIQKALEAQSQEFN

Query:  RKLLEMQQMFLSGPGSSSNSKE
        RKLLEMQQMFLSG GSSS SK+
Subjt:  RKLLEMQQMFLSGPGSSSNSKE

A0A6J1D6S9 uncharacterized protein LOC1110174616.4e-4779.17Show/hide
Query:  MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIGMGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEELATQRKANEDQQIATQEQIQKALEAQSQEFN
        MITLKAYHASQGDEKTEEEIMETVLG+RSNY+IGMGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEE+A            TQEQIQKALEAQSQEFN
Subjt:  MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIGMGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEELATQRKANEDQQIATQEQIQKALEAQSQEFN

Query:  RKLLEMQQMFLSGPGSSSNSKE-RKIWVGVMRLC--VCIEYVCF
        RKLLEMQQMFLSG GSSS SK  R+I   V  LC  V   YVCF
Subjt:  RKLLEMQQMFLSGPGSSSNSKE-RKIWVGVMRLC--VCIEYVCF

A0A6J1DLF1 uncharacterized protein LOC1110211384.7e-1397.56Show/hide
Query:  MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIGMGYGPKP
        MITLKA HASQGDEKTEEEIMETVLGRRSNYIIGMGYGPKP
Subjt:  MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIGMGYGPKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTACCTTAAAGGCGTATCATGCTTCTCAAGGAGACGAAAAAACAGAAGAAGAAATCATGGAGACGGTCCTTGGGAGAAGATCAAACTATATAATAGGAATGGGATA
TGGACCGAAACCCACCAGAAACAAAGGATCATCATCAAAATACTCTGATGAATATGTGGAGTCATTAGAGGCTCGTCTTCAGAAGCATGAGGAAGAATTGGCAACTCAAC
GAAAAGCGAACGAAGACCAACAAATTGCCACCCAAGAACAAATACAAAAAGCATTGGAGGCTCAAAGCCAGGAGTTTAACAGGAAACTTCTCGAAATGCAACAAATGTTT
CTTTCGGGGCCAGGAAGTTCATCGAATAGTAAGGAGAGGAAGATATGGGTGGGTGTTATGCGTTTATGTGTGTGTATTGAGTACGTATGCTTTTCTTTGGAATATATTTT
ACCTTTGGAGTATGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTACCTTAAAGGCGTATCATGCTTCTCAAGGAGACGAAAAAACAGAAGAAGAAATCATGGAGACGGTCCTTGGGAGAAGATCAAACTATATAATAGGAATGGGATA
TGGACCGAAACCCACCAGAAACAAAGGATCATCATCAAAATACTCTGATGAATATGTGGAGTCATTAGAGGCTCGTCTTCAGAAGCATGAGGAAGAATTGGCAACTCAAC
GAAAAGCGAACGAAGACCAACAAATTGCCACCCAAGAACAAATACAAAAAGCATTGGAGGCTCAAAGCCAGGAGTTTAACAGGAAACTTCTCGAAATGCAACAAATGTTT
CTTTCGGGGCCAGGAAGTTCATCGAATAGTAAGGAGAGGAAGATATGGGTGGGTGTTATGCGTTTATGTGTGTGTATTGAGTACGTATGCTTTTCTTTGGAATATATTTT
ACCTTTGGAGTATGTCTGA
Protein sequenceShow/hide protein sequence
MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIGMGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEELATQRKANEDQQIATQEQIQKALEAQSQEFNRKLLEMQQMF
LSGPGSSSNSKERKIWVGVMRLCVCIEYVCFSLEYILPLEYV