; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS028760 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028760
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionribosomal RNA processing protein 36 homolog
Genome locationscaffold155:591918..605326
RNA-Seq ExpressionMS028760
SyntenyMS028760
Gene Ontology termsGO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0000469 - cleavage involved in rRNA processing (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030686 - 90S preribosome (cellular component)
InterPro domainsIPR009292 - rRNA biogenesis protein RRP36


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008456647.1 PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis melo]3.2e-9077.87Show/hide
Query:  MKKRS----SSSKQVM-EESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPK
        MKK S    SS KQ+M EESEDLESSS ++ +DSEEENIERELADVTFEELQRARSDGSHS YQKT QEKKGGRANKNRPMEVSS+KPVSRFREVIQAPK
Subjt:  MKKRS----SSSKQVM-EESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPK

Query:  NMVRDPRFESLSGTLDVEGFKKRYNFIYENNLPAEKE-------------------------DKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLK
        +MVRDPRFESLSGTLDV+GFKKRY+FIYE NLPAEKE                         DKQFKSD+TKRVDAAILAKHK KEREAAK GKKPFYLK
Subjt:  NMVRDPRFESLSGTLDVEGFKKRYNFIYENNLPAEKE-------------------------DKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLK

Query:  KSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKLDEQE
        KSEIRKQRL+EKY  LKSTGKLDAY+ER+RRKNAAKDRRY+PY RSSKLDEQ+
Subjt:  KSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKLDEQE

XP_022141752.1 ribosomal RNA processing protein 36 homolog [Momordica charantia]2.9e-10789.92Show/hide
Query:  MKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRD
        MKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRD
Subjt:  MKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRD

Query:  PRFESLSGTLDVEGFKKRYNFIYENNLPAEKE-------------------------DKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLKKSEIR
        PRFESLSGTLDVEGFKKRYNFIYENNLPAEKE                         DKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLKKSEIR
Subjt:  PRFESLSGTLDVEGFKKRYNFIYENNLPAEKE-------------------------DKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLKKSEIR

Query:  KQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKLDEQE
        KQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKLDEQE
Subjt:  KQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKLDEQE

XP_022925402.1 ribosomal RNA processing protein 36 homolog [Cucurbita moschata]3.2e-9080.33Show/hide
Query:  SSSKQVME-ESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFE
        SSSKQ+ME E EDLE SS E+ +DSEEENIERELADVTFEELQR RSDGSHS YQKTNQEKKG RANKNRPMEVSSKKPV RFREVIQAPKNMVRDPRFE
Subjt:  SSSKQVME-ESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFE

Query:  SLSGTLDVEGFKKRYNFIYENNLPAEKE-------------------------DKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLKKSEIRKQRL
        SL+G+LDVEGFKKRY+FIYENNLPAEKE                         DKQFKSD+TKRVDAAILA HK KEREAAK GKKPFYLKKSEIRKQRL
Subjt:  SLSGTLDVEGFKKRYNFIYENNLPAEKE-------------------------DKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLKKSEIRKQRL

Query:  IEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKLDEQE
         EKYNTLKSTGKLDAYMERRRRKNAAKDRRY+PY RSSK DEQE
Subjt:  IEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKLDEQE

XP_023535518.1 ribosomal RNA processing protein 36 homolog [Cucurbita pepo subsp. pepo]1.2e-8979.92Show/hide
Query:  SSSKQVME-ESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFE
        SSSKQ+ME E EDLE SS E+ +DSEEENIERELADVTFEELQR RSDGSHS YQKTNQEKKG RANKNRPMEVSSKKPV RFREVIQAPK+MVRDPRFE
Subjt:  SSSKQVME-ESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFE

Query:  SLSGTLDVEGFKKRYNFIYENNLPAEKE-------------------------DKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLKKSEIRKQRL
        SL+G+LDVEGFKKRY+FIYENNLPAEKE                         DKQFKSD+TKRVDAAILA HK KEREAAK GKKPFYLKKSEIRKQRL
Subjt:  SLSGTLDVEGFKKRYNFIYENNLPAEKE-------------------------DKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLKKSEIRKQRL

Query:  IEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKLDEQE
         EKYNTLKSTGKLDAYMERRRRKNAAKDRRY+PY RSSK DEQE
Subjt:  IEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKLDEQE

XP_038889542.1 ribosomal RNA processing protein 36 homolog [Benincasa hispida]1.4e-9078.26Show/hide
Query:  MKKRS----SSSKQVM-EESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPK
        MKK S    SS KQ+M EESED ESSS +D +DSEEENIERELADVTFEELQRARSDGSHS +QKT QEKKGGRANKNRPMEVSS+KPVSRFREVIQAPK
Subjt:  MKKRS----SSSKQVM-EESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPK

Query:  NMVRDPRFESLSGTLDVEGFKKRYNFIYENNLPAEKE-------------------------DKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLK
        NMVRDPRFESLSGTLDV+GFKKRY+FIYEN LPAEKE                         DKQFKSD+TKRVDAAILAKHK KEREAAK GKKPFYLK
Subjt:  NMVRDPRFESLSGTLDVEGFKKRYNFIYENNLPAEKE-------------------------DKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLK

Query:  KSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKLDEQE
        KSEIRKQRLIEKY +LKSTGKLDAY+ERRRRKNAAKDRRY+P+ RSSKLDEQ+
Subjt:  KSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKLDEQE

TrEMBL top hitse value%identityAlignment
A0A1S3C3C0 ribosomal RNA processing protein 36 homolog1.6e-9077.87Show/hide
Query:  MKKRS----SSSKQVM-EESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPK
        MKK S    SS KQ+M EESEDLESSS ++ +DSEEENIERELADVTFEELQRARSDGSHS YQKT QEKKGGRANKNRPMEVSS+KPVSRFREVIQAPK
Subjt:  MKKRS----SSSKQVM-EESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPK

Query:  NMVRDPRFESLSGTLDVEGFKKRYNFIYENNLPAEKE-------------------------DKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLK
        +MVRDPRFESLSGTLDV+GFKKRY+FIYE NLPAEKE                         DKQFKSD+TKRVDAAILAKHK KEREAAK GKKPFYLK
Subjt:  NMVRDPRFESLSGTLDVEGFKKRYNFIYENNLPAEKE-------------------------DKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLK

Query:  KSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKLDEQE
        KSEIRKQRL+EKY  LKSTGKLDAY+ER+RRKNAAKDRRY+PY RSSKLDEQ+
Subjt:  KSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKLDEQE

A0A5A7SR00 Ribosomal RNA processing protein 36-like protein1.6e-9077.87Show/hide
Query:  MKKRS----SSSKQVM-EESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPK
        MKK S    SS KQ+M EESEDLESSS ++ +DSEEENIERELADVTFEELQRARSDGSHS YQKT QEKKGGRANKNRPMEVSS+KPVSRFREVIQAPK
Subjt:  MKKRS----SSSKQVM-EESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPK

Query:  NMVRDPRFESLSGTLDVEGFKKRYNFIYENNLPAEKE-------------------------DKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLK
        +MVRDPRFESLSGTLDV+GFKKRY+FIYE NLPAEKE                         DKQFKSD+TKRVDAAILAKHK KEREAAK GKKPFYLK
Subjt:  NMVRDPRFESLSGTLDVEGFKKRYNFIYENNLPAEKE-------------------------DKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLK

Query:  KSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKLDEQE
        KSEIRKQRL+EKY  LKSTGKLDAY+ER+RRKNAAKDRRY+PY RSSKLDEQ+
Subjt:  KSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKLDEQE

A0A6J1CKR1 ribosomal RNA processing protein 36 homolog1.4e-10789.92Show/hide
Query:  MKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRD
        MKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRD
Subjt:  MKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRD

Query:  PRFESLSGTLDVEGFKKRYNFIYENNLPAEKE-------------------------DKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLKKSEIR
        PRFESLSGTLDVEGFKKRYNFIYENNLPAEKE                         DKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLKKSEIR
Subjt:  PRFESLSGTLDVEGFKKRYNFIYENNLPAEKE-------------------------DKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLKKSEIR

Query:  KQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKLDEQE
        KQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKLDEQE
Subjt:  KQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKLDEQE

A0A6J1EBL5 ribosomal RNA processing protein 36 homolog1.6e-9080.33Show/hide
Query:  SSSKQVME-ESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFE
        SSSKQ+ME E EDLE SS E+ +DSEEENIERELADVTFEELQR RSDGSHS YQKTNQEKKG RANKNRPMEVSSKKPV RFREVIQAPKNMVRDPRFE
Subjt:  SSSKQVME-ESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFE

Query:  SLSGTLDVEGFKKRYNFIYENNLPAEKE-------------------------DKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLKKSEIRKQRL
        SL+G+LDVEGFKKRY+FIYENNLPAEKE                         DKQFKSD+TKRVDAAILA HK KEREAAK GKKPFYLKKSEIRKQRL
Subjt:  SLSGTLDVEGFKKRYNFIYENNLPAEKE-------------------------DKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLKKSEIRKQRL

Query:  IEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKLDEQE
         EKYNTLKSTGKLDAYMERRRRKNAAKDRRY+PY RSSK DEQE
Subjt:  IEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKLDEQE

A0A6J1I8W9 ribosomal RNA processing protein 36 homolog5.9e-9079.92Show/hide
Query:  SSSKQVME-ESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFE
        SSSKQ+ME E EDLE SS E+ +DSEEENIERELADVTFEELQR RSDGSHS YQKTNQEKKG RANKNRPMEVSSKKPV RFREVIQAPKNMVRDPRFE
Subjt:  SSSKQVME-ESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFE

Query:  SLSGTLDVEGFKKRYNFIYENNLPAEKE-------------------------DKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLKKSEIRKQRL
        SL+G+LDVEGFKKRY+FIYENNLPAEKE                         DKQFKSD+TKRVDAAILA HK KEREAAK GKKPFYLKKSEIRKQRL
Subjt:  SLSGTLDVEGFKKRYNFIYENNLPAEKE-------------------------DKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLKKSEIRKQRL

Query:  IEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKLDEQE
         EKYN LKSTGKLDAYMERRRRKNAAKDRRY+PY RSSK DEQE
Subjt:  IEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKLDEQE

SwissProt top hitse value%identityAlignment
A4R1G4 rRNA biogenesis protein RRP363.8e-1733.84Show/hide
Query:  QRARSDGSHSTYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKN---MVRDPRFESLSGTLDVEGFKKRYNFI--YENN---------------
        + AR   + +  +        GR  K+ P E+SSK+PVSR+REV++ P N     RD RFE      D + F++ Y F+  Y N+               
Subjt:  QRARSDGSHSTYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKN---MVRDPRFESLSGTLDVEGFKKRYNFI--YENN---------------

Query:  LPAEKEDKQFK---------SDTTKRVDAAILAKHKNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR
         PA++ED + K         S   K  +  ++ +HK KE+E  K GKKPF+LKKSE +K  L++KY  + S G++D  +E++R+K A K+++ +P+ R
Subjt:  LPAEKEDKQFK---------SDTTKRVDAAILAKHKNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR

A6RKG5 rRNA biogenesis protein rrp362.9e-1731.98Show/hide
Query:  EDLESSSPEDFVDSEEENIERELADVTFEELQRAR------SDGSHSTYQKTN---------QEKKGG--------RANKNRPMEVSSKKPVSRFREVIQ
        E+++    E+  +SEEE      A ++F  L +A+      S       +K+N          E+K G        R++KN P EVSSKK VSR REV+ 
Subjt:  EDLESSSPEDFVDSEEENIERELADVTFEELQRAR------SDGSHSTYQKTN---------QEKKGG--------RANKNRPMEVSSKKPVSRFREVIQ

Query:  APKNMVRDPRFESLSGTLDVEGFKKRYNFIY---ENNLPAEKE---------------------DKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFY
          K  +RDPRFE  +G +D++  +K Y+F+    E+ +   KE                     + + K+D  KR    +L KH+ +E+E  K GK P+Y
Subjt:  APKNMVRDPRFESLSGTLDVEGFKKRYNFIY---ENNLPAEKE---------------------DKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFY

Query:  LKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR
        LKK+E +K+ L++ +  LK   +LD  +ERRR+K   K+++ +P  R
Subjt:  LKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR

A7E4K0 rRNA biogenesis protein rrp364.9e-1730.48Show/hide
Query:  ELGQINGMKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGG-----------------------RA
        E+G+ +  ++ SS        S++ E    E+  +SEEE      A ++F  L +A++  S  + + + + KK                         R+
Subjt:  ELGQINGMKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGG-----------------------RA

Query:  NKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYNF---------------IYENNLPAEKE---------DKQFKSDTTKRVDA
        +KN P E+SSKK VSR REV+   K  +RDPRF+   G +D+   +K Y+F               I +     EKE         + + K+D  KR   
Subjt:  NKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYNF---------------IYENNLPAEKE---------DKQFKSDTTKRVDA

Query:  AILAKHKNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR
         IL KH+ +E+E  K GK P+YLKK+E +K+ L++ Y  LK   +LD  +ERRR+K   K+++ +P  R
Subjt:  AILAKHKNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR

A7SL20 Ribosomal RNA processing protein 36 homolog4.3e-2136.4Show/hide
Query:  MEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKT----NQEKKGG------RANKNR-PMEVSSKKPVSRFREVIQAPKNMVRD
        + +S D ES + +   + E E+++ EL+ + F ELQ  +       Y        +E+  G      +  KN+ P E+SSK+ V + R+V+Q  K M RD
Subjt:  MEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKT----NQEKKGG------RANKNR-PMEVSSKKPVSRFREVIQAPKNMVRD

Query:  PRFESLSGTLDVEGFKKRYNFI----YENNLPAEKEDKQFKS------------------DTTKRVDAAILAKHKNK--EREAAKLGKKPFYLKKSEIRK
        PRF+ LSG  + + F+K Y+F+     E     EKE K+ K+                   + K  +A   +K K K  ERE  + GKKPFYL+KSE++K
Subjt:  PRFESLSGTLDVEGFKKRYNFI----YENNLPAEKEDKQFKS------------------DTTKRVDAAILAKHKNK--EREAAKLGKKPFYLKKSEIRK

Query:  QRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR
          L EKY  LKS GKL  Y+ +RR+K A+KDRR+VP  R
Subjt:  QRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR

B6K8A0 rRNA biogenesis protein rrp363.3e-2129.89Show/hide
Query:  LGQINGMKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGGRANKNR--------------------
        L  +N   +     + VM E E  + ++ E    ++ E+ +R+L  + F EL  A+        + T  +K G + +KNR                    
Subjt:  LGQINGMKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGGRANKNR--------------------

Query:  ---PMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYNFIYENNLPAEKEDKQ--------------------FKSDTTKRVD----AA
           P+E+SSK+ V RFREV+  PK + RDPRF++LSG L+V+  K  Y F+ E  L   K+ +Q                     +S   +R +    A 
Subjt:  ---PMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYNFIYENNLPAEKEDKQ--------------------FKSDTTKRVD----AA

Query:  ILAKHKNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSK
        +L +H+  E+E  + GKKPFYLKKSE +K   ++KY +++ T  LD YME+++++ A K+++ +P  R  +
Subjt:  ILAKHKNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSK

Arabidopsis top hitse value%identityAlignment
AT1G12650.1 unknown protein3.0e-5453.66Show/hide
Query:  KKRSSSSKQVMEESEDLESSSPEDFVDS-EEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGG--RANKNRPMEVSSKKPVSRFREVIQAPKNMV
        K   SSSK V E+SE+ E  S      S EEE  E+EL   TFEE+ + R+DGS +   K NQ KK G  RANKNRPMEVSSKKPVSR+REV+  PK  V
Subjt:  KKRSSSSKQVMEESEDLESSSPEDFVDS-EEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGG--RANKNRPMEVSSKKPVSRFREVIQAPKNMV

Query:  RDPRFESLSGTLDVEGFKKRYNFIYENNLPAEKEDKQFKSDTTKRVD--------------------------AAILAKHKNKEREAAKLGKKPFYLKKS
        RDPRF  L GTLDVEGF+KRYNF +E+ LP E+E+ + K   TK  +                          AAIL +HK KEREAAK GK+P+YLKKS
Subjt:  RDPRFESLSGTLDVEGFKKRYNFIYENNLPAEKEDKQFKSDTTKRVD--------------------------AAILAKHKNKEREAAKLGKKPFYLKKS

Query:  EIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSK
        EIRKQ LIEKYN+LK +GKL +Y+++RR+KNA KD R++PY R+ +
Subjt:  EIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSK

AT1G12650.2 unknown protein3.0e-5453.66Show/hide
Query:  KKRSSSSKQVMEESEDLESSSPEDFVDS-EEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGG--RANKNRPMEVSSKKPVSRFREVIQAPKNMV
        K   SSSK V E+SE+ E  S      S EEE  E+EL   TFEE+ + R+DGS +   K NQ KK G  RANKNRPMEVSSKKPVSR+REV+  PK  V
Subjt:  KKRSSSSKQVMEESEDLESSSPEDFVDS-EEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGG--RANKNRPMEVSSKKPVSRFREVIQAPKNMV

Query:  RDPRFESLSGTLDVEGFKKRYNFIYENNLPAEKEDKQFKSDTTKRVD--------------------------AAILAKHKNKEREAAKLGKKPFYLKKS
        RDPRF  L GTLDVEGF+KRYNF +E+ LP E+E+ + K   TK  +                          AAIL +HK KEREAAK GK+P+YLKKS
Subjt:  RDPRFESLSGTLDVEGFKKRYNFIYENNLPAEKEDKQFKSDTTKRVD--------------------------AAILAKHKNKEREAAKLGKKPFYLKKS

Query:  EIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSK
        EIRKQ LIEKYN+LK +GKL +Y+++RR+KNA KD R++PY R+ +
Subjt:  EIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSK

AT1G12650.3 unknown protein3.0e-5453.66Show/hide
Query:  KKRSSSSKQVMEESEDLESSSPEDFVDS-EEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGG--RANKNRPMEVSSKKPVSRFREVIQAPKNMV
        K   SSSK V E+SE+ E  S      S EEE  E+EL   TFEE+ + R+DGS +   K NQ KK G  RANKNRPMEVSSKKPVSR+REV+  PK  V
Subjt:  KKRSSSSKQVMEESEDLESSSPEDFVDS-EEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGG--RANKNRPMEVSSKKPVSRFREVIQAPKNMV

Query:  RDPRFESLSGTLDVEGFKKRYNFIYENNLPAEKEDKQFKSDTTKRVD--------------------------AAILAKHKNKEREAAKLGKKPFYLKKS
        RDPRF  L GTLDVEGF+KRYNF +E+ LP E+E+ + K   TK  +                          AAIL +HK KEREAAK GK+P+YLKKS
Subjt:  RDPRFESLSGTLDVEGFKKRYNFIYENNLPAEKEDKQFKSDTTKRVD--------------------------AAILAKHKNKEREAAKLGKKPFYLKKS

Query:  EIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSK
        EIRKQ LIEKYN+LK +GKL +Y+++RR+KNA KD R++PY R+ +
Subjt:  EIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSK

AT1G12650.4 unknown protein3.0e-5453.66Show/hide
Query:  KKRSSSSKQVMEESEDLESSSPEDFVDS-EEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGG--RANKNRPMEVSSKKPVSRFREVIQAPKNMV
        K   SSSK V E+SE+ E  S      S EEE  E+EL   TFEE+ + R+DGS +   K NQ KK G  RANKNRPMEVSSKKPVSR+REV+  PK  V
Subjt:  KKRSSSSKQVMEESEDLESSSPEDFVDS-EEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGG--RANKNRPMEVSSKKPVSRFREVIQAPKNMV

Query:  RDPRFESLSGTLDVEGFKKRYNFIYENNLPAEKEDKQFKSDTTKRVD--------------------------AAILAKHKNKEREAAKLGKKPFYLKKS
        RDPRF  L GTLDVEGF+KRYNF +E+ LP E+E+ + K   TK  +                          AAIL +HK KEREAAK GK+P+YLKKS
Subjt:  RDPRFESLSGTLDVEGFKKRYNFIYENNLPAEKEDKQFKSDTTKRVD--------------------------AAILAKHKNKEREAAKLGKKPFYLKKS

Query:  EIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSK
        EIRKQ LIEKYN+LK +GKL +Y+++RR+KNA KD R++PY R+ +
Subjt:  EIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAGTTGGAGCTTCCTCCAACTTGGACCCTGGTCGAGCTCTTCGCAAATCCCAGCATACCCCTGGTTGGGATGGCCGCTCCTCACCGTCGATACCATTCAGCCTTC
ATCGCCCATCATCCGCTACGTTCAGCCACACAAGGAAGAAGAGAATATAGAGCGTGAACTTGCAGATATAACTTTTGAAGAGTTGCAGAGAGTGCAGTCTGATGGGTCAC
ATTTGACGTATCAAAAGACCAATCAAGAGAAGAAAGGTGGGAGGGCAAACAAGAACAGGCCAATGGAGGTTAGTAGTAAGAAACTAGTTAGTAGATTGAGAAAAGCCAAT
CAGGCTCCTAAGAATGTGGTACAAGATCCATGTTTCGAATCTTTATCTGGCACTTTCGATGTTGAGGGCCAAAATCGTGAGTCGCCACCTTCAAATACCGCCATCGCTAG
TGGTCTAGCCGGATCTGTCGTGGTCTCGCTGGAAGCAAACCCGATCGGATATCTGCAGCAAATCCGAACGCCGGAGACGAACGGAGCAACAGCCGCGTGGAGTCTTGTGG
TTGCGGCAGGCACAAACGGTTATCAAAGCATTTGTGAATTAGGGCAAATAAATGGAATGAAGAAACGTAGCAGTTCTAGCAAACAAGTGATGGAGGAAAGCGAGGATCTT
GAATCTTCTTCCCCAGAAGATTTTGTTGACTCGGAAGAAGAGAATATTGAGCGTGAACTTGCCGATGTAACTTTTGAAGAGTTGCAGAGAGCGCGGTCTGATGGGTCGCA
TTCGACGTATCAAAAGACCAATCAAGAGAAGAAAGGTGGGAGGGCAAACAAGAACAGGCCAATGGAGGTTAGTAGTAAGAAACCAGTTAGTAGATTCAGAGAGGTCATTC
AGGCTCCTAAGAACATGGTACGTGATCCACGTTTCGAATCTTTATCTGGCACTTTAGATGTCGAGGGATTTAAGAAGAGATATAATTTCATTTACGAGAATAATCTTCCT
GCTGAAAAAGAGGACAAACAATTCAAATCTGACACCACAAAACGTGTCGATGCTGCAATTCTGGCCAAACACAAGAATAAAGAGAGAGAAGCAGCCAAGCTTGGGAAAAA
GCCCTTCTATCTTAAGAAATCTGAAATTCGAAAGCAAAGGCTTATTGAAAAATACAACACTCTTAAGTCCACTGGAAAGCTTGATGCCTATATGGAGAGGAGGAGGAGGA
AAAATGCTGCAAAGGATCGTAGATATGTACCATATGGACGATCTAGCAAGCTTGATGAACAAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAGTTGGAGCTTCCTCCAACTTGGACCCTGGTCGAGCTCTTCGCAAATCCCAGCATACCCCTGGTTGGGATGGCCGCTCCTCACCGTCGATACCATTCAGCCTTC
ATCGCCCATCATCCGCTACGTTCAGCCACACAAGGAAGAAGAGAATATAGAGCGTGAACTTGCAGATATAACTTTTGAAGAGTTGCAGAGAGTGCAGTCTGATGGGTCAC
ATTTGACGTATCAAAAGACCAATCAAGAGAAGAAAGGTGGGAGGGCAAACAAGAACAGGCCAATGGAGGTTAGTAGTAAGAAACTAGTTAGTAGATTGAGAAAAGCCAAT
CAGGCTCCTAAGAATGTGGTACAAGATCCATGTTTCGAATCTTTATCTGGCACTTTCGATGTTGAGGGCCAAAATCGTGAGTCGCCACCTTCAAATACCGCCATCGCTAG
TGGTCTAGCCGGATCTGTCGTGGTCTCGCTGGAAGCAAACCCGATCGGATATCTGCAGCAAATCCGAACGCCGGAGACGAACGGAGCAACAGCCGCGTGGAGTCTTGTGG
TTGCGGCAGGCACAAACGGTTATCAAAGCATTTGTGAATTAGGGCAAATAAATGGAATGAAGAAACGTAGCAGTTCTAGCAAACAAGTGATGGAGGAAAGCGAGGATCTT
GAATCTTCTTCCCCAGAAGATTTTGTTGACTCGGAAGAAGAGAATATTGAGCGTGAACTTGCCGATGTAACTTTTGAAGAGTTGCAGAGAGCGCGGTCTGATGGGTCGCA
TTCGACGTATCAAAAGACCAATCAAGAGAAGAAAGGTGGGAGGGCAAACAAGAACAGGCCAATGGAGGTTAGTAGTAAGAAACCAGTTAGTAGATTCAGAGAGGTCATTC
AGGCTCCTAAGAACATGGTACGTGATCCACGTTTCGAATCTTTATCTGGCACTTTAGATGTCGAGGGATTTAAGAAGAGATATAATTTCATTTACGAGAATAATCTTCCT
GCTGAAAAAGAGGACAAACAATTCAAATCTGACACCACAAAACGTGTCGATGCTGCAATTCTGGCCAAACACAAGAATAAAGAGAGAGAAGCAGCCAAGCTTGGGAAAAA
GCCCTTCTATCTTAAGAAATCTGAAATTCGAAAGCAAAGGCTTATTGAAAAATACAACACTCTTAAGTCCACTGGAAAGCTTGATGCCTATATGGAGAGGAGGAGGAGGA
AAAATGCTGCAAAGGATCGTAGATATGTACCATATGGACGATCTAGCAAGCTTGATGAACAAGAGTGA
Protein sequenceShow/hide protein sequence
MASWSFLQLGPWSSSSQIPAYPWLGWPLLTVDTIQPSSPIIRYVQPHKEEENIERELADITFEELQRVQSDGSHLTYQKTNQEKKGGRANKNRPMEVSSKKLVSRLRKAN
QAPKNVVQDPCFESLSGTFDVEGQNRESPPSNTAIASGLAGSVVVSLEANPIGYLQQIRTPETNGATAAWSLVVAAGTNGYQSICELGQINGMKKRSSSSKQVMEESEDL
ESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYNFIYENNLP
AEKEDKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKLDEQE