; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS028782 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028782
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold570:182187..184097
RNA-Seq ExpressionMS028782
SyntenyMS028782
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154644.1 uncharacterized protein LOC111021856 isoform X1 [Momordica charantia]4.5e-83100Show/hide
Query:  MSSSSSTTTILVTSLVVAVVLLIVRAPTSNRLSRRLRILLSLYGKGCVHSLPNLLLTASRFFRPEMMSDFRRTLGDPQVSISIFLPLKLLEVRASYSSSS
        MSSSSSTTTILVTSLVVAVVLLIVRAPTSNRLSRRLRILLSLYGKGCVHSLPNLLLTASRFFRPEMMSDFRRTLGDPQVSISIFLPLKLLEVRASYSSSS
Subjt:  MSSSSSTTTILVTSLVVAVVLLIVRAPTSNRLSRRLRILLSLYGKGCVHSLPNLLLTASRFFRPEMMSDFRRTLGDPQVSISIFLPLKLLEVRASYSSSS

Query:  EFLEENQVQVQIRIPILNLLGGKICVGLTKHKYETRIKLLTTAEDVARAMAVAVVSATTVIYYPCSLLPSVIYS
        EFLEENQVQVQIRIPILNLLGGKICVGLTKHKYETRIKLLTTAEDVARAMAVAVVSATTVIYYPCSLLPSVIYS
Subjt:  EFLEENQVQVQIRIPILNLLGGKICVGLTKHKYETRIKLLTTAEDVARAMAVAVVSATTVIYYPCSLLPSVIYS
TrEMBL top hitse value%identityAlignment
A0A6J1DMR6 uncharacterized protein LOC111021856 isoform X12.2e-83100Show/hide
Query:  MSSSSSTTTILVTSLVVAVVLLIVRAPTSNRLSRRLRILLSLYGKGCVHSLPNLLLTASRFFRPEMMSDFRRTLGDPQVSISIFLPLKLLEVRASYSSSS
        MSSSSSTTTILVTSLVVAVVLLIVRAPTSNRLSRRLRILLSLYGKGCVHSLPNLLLTASRFFRPEMMSDFRRTLGDPQVSISIFLPLKLLEVRASYSSSS
Subjt:  MSSSSSTTTILVTSLVVAVVLLIVRAPTSNRLSRRLRILLSLYGKGCVHSLPNLLLTASRFFRPEMMSDFRRTLGDPQVSISIFLPLKLLEVRASYSSSS

Query:  EFLEENQVQVQIRIPILNLLGGKICVGLTKHKYETRIKLLTTAEDVARAMAVAVVSATTVIYYPCSLLPSVIYS
        EFLEENQVQVQIRIPILNLLGGKICVGLTKHKYETRIKLLTTAEDVARAMAVAVVSATTVIYYPCSLLPSVIYS
Subjt:  EFLEENQVQVQIRIPILNLLGGKICVGLTKHKYETRIKLLTTAEDVARAMAVAVVSATTVIYYPCSLLPSVIYS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCGTCATCGTCGACAACAACAATTCTCGTAACTTCACTTGTAGTTGCAGTAGTCCTACTCATAGTCCGTGCACCAACGTCGAATCGTCTTTCCCGTCGCCTTCG
CATCCTGCTCTCACTCTACGGTAAAGGTTGCGTCCATTCACTTCCCAATTTACTTCTTACAGCTTCGCGTTTTTTTCGGCCTGAGATGATGAGCGACTTTCGTCGGACGC
TGGGGGATCCGCAGGTTTCGATCTCCATCTTCCTGCCGTTGAAGCTGCTTGAAGTCAGGGCCTCCTATTCATCCTCTTCGGAGTTTTTGGAGGAGAACCAGGTCCAGGTC
CAGATTCGGATTCCTATTTTGAATCTTCTTGGCGGAAAGATATGTGTCGGCTTAACGAAGCATAAGTATGAAACCAGGATAAAATTGTTGACGACGGCAGAAGATGTTGC
AAGAGCCATGGCTGTTGCAGTTGTTTCAGCAACAACTGTTATATATTATCCTTGCTCTCTTCTTCCATCTGTTATATATTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCGTCATCGTCGACAACAACAATTCTCGTAACTTCACTTGTAGTTGCAGTAGTCCTACTCATAGTCCGTGCACCAACGTCGAATCGTCTTTCCCGTCGCCTTCG
CATCCTGCTCTCACTCTACGGTAAAGGTTGCGTCCATTCACTTCCCAATTTACTTCTTACAGCTTCGCGTTTTTTTCGGCCTGAGATGATGAGCGACTTTCGTCGGACGC
TGGGGGATCCGCAGGTTTCGATCTCCATCTTCCTGCCGTTGAAGCTGCTTGAAGTCAGGGCCTCCTATTCATCCTCTTCGGAGTTTTTGGAGGAGAACCAGGTCCAGGTC
CAGATTCGGATTCCTATTTTGAATCTTCTTGGCGGAAAGATATGTGTCGGCTTAACGAAGCATAAGTATGAAACCAGGATAAAATTGTTGACGACGGCAGAAGATGTTGC
AAGAGCCATGGCTGTTGCAGTTGTTTCAGCAACAACTGTTATATATTATCCTTGCTCTCTTCTTCCATCTGTTATATATTCTTAG
Protein sequenceShow/hide protein sequence
MSSSSSTTTILVTSLVVAVVLLIVRAPTSNRLSRRLRILLSLYGKGCVHSLPNLLLTASRFFRPEMMSDFRRTLGDPQVSISIFLPLKLLEVRASYSSSSEFLEENQVQV
QIRIPILNLLGGKICVGLTKHKYETRIKLLTTAEDVARAMAVAVVSATTVIYYPCSLLPSVIYS