; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS028789 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028789
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProfilin
Genome locationscaffold570:555681..557001
RNA-Seq ExpressionMS028789
SyntenyMS028789
Gene Ontology termsGO:0042989 - sequestering of actin monomers (biological process)
GO:0005856 - cytoskeleton (cellular component)
GO:0005938 - cell cortex (cellular component)
GO:0003785 - actin monomer binding (molecular function)
InterPro domainsIPR005455 - Profilin
IPR027310 - Profilin conserved site
IPR036140 - Profilin superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458981.1 PREDICTED: profilin-4 [Cucumis melo]2.0e-7096.24Show/hide
Query:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG
        MSWQTYVDDHLMCDIDGQGQHLTA+AIVGHDGSVWAQS+SFPQFK +EI GIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG
Subjt:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG

Query:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL
        QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL
Subjt:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL

XP_021596833.1 profilin-4 [Manihot esculenta]1.2e-7096.99Show/hide
Query:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG
        MSWQTYVD+HLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQE+T IMKDFDEPGHLAPTGLHLGGTKYMVIQGE GAVIRGKKGSGGITIKKTG
Subjt:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG

Query:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL
        QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL
Subjt:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL

XP_022154694.1 profilin-4 [Momordica charantia]5.5e-73100Show/hide
Query:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG
        MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG
Subjt:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG

Query:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL
        QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL
Subjt:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL

XP_038695731.1 profilin-4 [Tripterygium wilfordii]2.0e-7095.49Show/hide
Query:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG
        MSWQTYVDDHLMCDIDGQGQHLTA+AIVGHDGSVWAQSS+FPQ KP+EITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGG+TIKKT 
Subjt:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG

Query:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL
        QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL
Subjt:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL

XP_038890820.1 profilin-4 [Benincasa hispida]6.8e-7196.24Show/hide
Query:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG
        MSWQTYVDDHLMCDIDGQGQHLTA+AIVGHDGSVWAQS+SFPQFK +EITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGIT+KKTG
Subjt:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG

Query:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL
        QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL
Subjt:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL

TrEMBL top hitse value%identityAlignment
A0A1S3C988 Profilin9.5e-7196.24Show/hide
Query:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG
        MSWQTYVDDHLMCDIDGQGQHLTA+AIVGHDGSVWAQS+SFPQFK +EI GIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG
Subjt:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG

Query:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL
        QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL
Subjt:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL

A0A2C9UCE7 Profilin5.6e-7196.99Show/hide
Query:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG
        MSWQTYVD+HLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQE+T IMKDFDEPGHLAPTGLHLGGTKYMVIQGE GAVIRGKKGSGGITIKKTG
Subjt:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG

Query:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL
        QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL
Subjt:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL

A0A6A4Q0W5 Profilin2.1e-7093.98Show/hide
Query:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG
        MSWQTYVD+HLMCDIDG G HL ASAI+GHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGG+TIKKTG
Subjt:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG

Query:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL
        QALVFG+YEEPVTPGQCNMVVERLGDYL+DQGL
Subjt:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL

A0A6J1DMX1 Profilin2.7e-73100Show/hide
Query:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG
        MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG
Subjt:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG

Query:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL
        QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL
Subjt:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL

A0A7J7BW29 Profilin9.5e-7195.49Show/hide
Query:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG
        MSWQTYVDDHLMCDIDGQGQHLTA+AIVGHDGSVWAQSS+FPQ KP+EITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGG+TIKKT 
Subjt:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG

Query:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL
        QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL
Subjt:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL

SwissProt top hitse value%identityAlignment
A4K9Z8 Profilin-21.1e-7194.74Show/hide
Query:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG
        MSWQTYVD+HLMCDIDGQGQ L ASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDF+EPGHLAPTGLHLGG KYMVIQGE GAVIRGKKGSGGITIKKTG
Subjt:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG

Query:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL
        QALVFGIYEEPVTPGQCNMVVERLGDYL+DQGL
Subjt:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL

A4KA39 Profilin-11.6e-7093.23Show/hide
Query:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG
        MSWQ YVD+HLMCDIDGQGQ L ASAIVGHDGSVWAQSSSFPQ KP+EITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGE GAVIRGKKGSGGITIKKTG
Subjt:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG

Query:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL
        QALVFGIYEEPVTPGQCNMVVERLGDYL++QGL
Subjt:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL

A4KA40 Profilin-22.0e-7093.23Show/hide
Query:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG
        MSWQ YVD+HLMCDIDGQGQ L ASAIVGHDGSVWAQSSSFPQ KP+EITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGE GAVIRGKKGSGGITIKKTG
Subjt:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG

Query:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL
        QALVFGIYEEPVTPGQCNMVVERLGDYL +QGL
Subjt:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL

A4KA44 Profilin-37.0e-7193.98Show/hide
Query:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG
        MSWQ YVD+HLMCDIDGQGQ L ASAIVGHDGSVWAQSSSFPQ KP+EITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGE GAVIRGKKGSGGITIKKTG
Subjt:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG

Query:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL
        QALVFGIYEEPVTPGQCNMVVERLGDYLV+QGL
Subjt:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL

A4KA45 Profilin-48.3e-7294.74Show/hide
Query:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG
        MSWQTYVD+HLMCDIDGQGQ L ASAIVGHDGSVWAQSSSFPQ KP+EITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGE GAVIRGKKGSGGITIKKTG
Subjt:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG

Query:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL
        QALVFGIYEEPVTPGQCNMVVERLGDYL+DQGL
Subjt:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL

Arabidopsis top hitse value%identityAlignment
AT2G19760.1 profilin 17.0e-5876.69Show/hide
Query:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG
        MSWQ+YVDDHLMCD+  +G HLTA+AI+G DGSVWAQS+ FPQ KPQEI GI KDF+EPG LAPTGL LGG KYMVIQGE GAVIRGKKG GG+TIKKT 
Subjt:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG

Query:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL
        QALVFG Y+EP+T GQCN+VVERLGDYL++  L
Subjt:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL

AT2G19770.1 profilin 58.3e-6784.33Show/hide
Query:  MSWQTYVDDHLMCDI-DGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKT
        MSWQ YVD+HLMCD+ DGQG HLTA+AI+GHDGSVWAQS++FPQFKPQEIT IMKDFDEPGHLAPTG+ L G KYMVIQGEP AVIRGKKG+GGITIKKT
Subjt:  MSWQTYVDDHLMCDI-DGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKT

Query:  GQALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL
        GQ++VFG+YEEPVTPGQCNMVVERLGDYL++QGL
Subjt:  GQALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL

AT4G29340.1 profilin 45.4e-6685.07Show/hide
Query:  MSWQTYVDDHLMCDI-DGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKT
        MSWQTYVD+HLMCD+ DGQG HLTA+AIVGHDGSVWAQS++FPQFK QE + IMKDFDEPGHLAPTGL + G KYMVIQGEPGAVIRGKKG+GGITIKKT
Subjt:  MSWQTYVDDHLMCDI-DGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKT

Query:  GQALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL
        GQ+ VFGIYEEPVTPGQCNMVVERLGDYL++QGL
Subjt:  GQALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL

AT4G29350.1 profilin 22.0e-5775.94Show/hide
Query:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG
        MSWQ+YVDDHLMC++  +G HLT +AI G DGSVWAQSS+FPQ KP EI GI KDF+E GHLAPTGL LGG KYMV+QGE GAVIRGKKG GG+TIKKT 
Subjt:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG

Query:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL
        QALVFGIY+EP+T GQCN+VVERLGDYL++ GL
Subjt:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL

AT5G56600.1 profilin 33.8e-5675.19Show/hide
Query:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG
        MSWQTYVDDHLMCD+   G  LTA+AI+G DGSVWAQS++FPQ KP+EI GI  DF  PG LAPTGL LGG KYMVIQGEP AVIRGKKG+GG+TIKKT 
Subjt:  MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTG

Query:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL
         ALVFGIY+EP+TPGQCNMVVE LG+YL++ GL
Subjt:  QALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTGGCAAACGTATGTGGATGACCATTTGATGTGCGACATCGATGGCCAAGGCCAGCACCTCACCGCCTCTGCCATTGTCGGCCATGATGGCAGCGTCTGGGCTCA
GAGCTCTTCATTTCCTCAGTTCAAGCCTCAGGAGATCACTGGTATCATGAAGGATTTTGATGAACCGGGTCATCTTGCACCTACTGGATTACACCTTGGAGGTACAAAGT
ACATGGTAATCCAAGGAGAGCCTGGAGCGGTCATCCGTGGAAAAAAGGGGTCTGGAGGGATTACCATAAAGAAGACTGGTCAAGCTCTAGTTTTTGGAATTTACGAAGAA
CCTGTTACTCCAGGACAGTGCAACATGGTCGTTGAGAGGCTGGGGGATTACCTCGTCGATCAGGGTCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGTGGCAAACGTATGTGGATGACCATTTGATGTGCGACATCGATGGCCAAGGCCAGCACCTCACCGCCTCTGCCATTGTCGGCCATGATGGCAGCGTCTGGGCTCA
GAGCTCTTCATTTCCTCAGTTCAAGCCTCAGGAGATCACTGGTATCATGAAGGATTTTGATGAACCGGGTCATCTTGCACCTACTGGATTACACCTTGGAGGTACAAAGT
ACATGGTAATCCAAGGAGAGCCTGGAGCGGTCATCCGTGGAAAAAAGGGGTCTGGAGGGATTACCATAAAGAAGACTGGTCAAGCTCTAGTTTTTGGAATTTACGAAGAA
CCTGTTACTCCAGGACAGTGCAACATGGTCGTTGAGAGGCTGGGGGATTACCTCGTCGATCAGGGTCTCTAG
Protein sequenceShow/hide protein sequence
MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEE
PVTPGQCNMVVERLGDYLVDQGL