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MS028807 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028807
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE
Genome locationscaffold207:209963..210166
RNA-Seq ExpressionMS028807
SyntenyMS028807
Gene Ontology termsGO:0009725 - response to hormone (biological process)
GO:0046622 - positive regulation of organ growth (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ERN18453.1 hypothetical protein AMTR_s00190p00037690 [Amborella trichopoda]2.3e-0667.24Show/hide
Query:  MVKFYSVFSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFALSTSQL
        MV+++S+ S VVL+  TASLVVLPLVLPPLPPPP  +LL+PV IL +LLFFALS+S +
Subjt:  MVKFYSVFSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFALSTSQL
KAF8044024.1 hypothetical protein BT93_A2107 [Corymbia citriodora subsp. variegata]2.5e-0556.67Show/hide
Query:  MVKFYSVFSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFALSTSQLPD
        MVKF+S  S  +L L   SL+VLPL+LPPLPPPP P+LLVPV I+ +L+  ALS   +P+
Subjt:  MVKFYSVFSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFALSTSQLPD
KYP31451.1 hypothetical protein KK1_048228 [Cajanus cajan]1.5e-0557.63Show/hide
Query:  FSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFALSTSQLPDSPLIYS
        +S ++L L T S+++LPLVLPPLPPPPL +L VPVFILG+L F A S S LP+  ++ S
Subjt:  FSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFALSTSQLPDSPLIYS
ONH94911.1 hypothetical protein PRUPE_7G039200 [Prunus persica]2.9e-0662.9Show/hide
Query:  MVKFYSVFSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFALSTS--QLPD
        MV+F+S  SG+ +V+   +L+VLPLVLPPLPPPPL +LLVPV IL +L F ALS S  QLPD
Subjt:  MVKFYSVFSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFALSTS--QLPD
RQO91248.1 hypothetical protein POPTR_006G037801 [Populus trichocarpa]1.7e-0654.84Show/hide
Query:  MVKFYSVFSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFALSTSQLPDSP
        M +++   + +V+V+ T  L+VLPLVLPPLPPPPL +L VPVFI+ +L+F A S S+LPD+P
Subjt:  MVKFYSVFSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFALSTSQLPDSP
TrEMBL top hitse value%identityAlignment
A0A151QMC9 Uncharacterized protein7.1e-0657.63Show/hide
Query:  FSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFALSTSQLPDSPLIYS
        +S ++L L T S+++LPLVLPPLPPPPL +L VPVFILG+L F A S S LP+  ++ S
Subjt:  FSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFALSTSQLPDSPLIYS
A0A251N6D5 Uncharacterized protein1.4e-0662.9Show/hide
Query:  MVKFYSVFSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFALSTS--QLPD
        MV+F+S  SG+ +V+   +L+VLPLVLPPLPPPPL +LLVPV IL +L F ALS S  QLPD
Subjt:  MVKFYSVFSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFALSTS--QLPD
A0A3N7GCD6 Uncharacterized protein8.4e-0754.84Show/hide
Query:  MVKFYSVFSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFALSTSQLPDSP
        M +++   + +V+V+ T  L+VLPLVLPPLPPPPL +L VPVFI+ +L+F A S S+LPD+P
Subjt:  MVKFYSVFSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFALSTSQLPDSP
A0A5B7AL58 Uncharacterized protein (Fragment)7.1e-0651.67Show/hide
Query:  MVKFYSVFSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFALSTSQLPD
        +V+F+S+ + V++V+ T SL+VLP+VLPPLPPPPL +L +P+ I+ +L+  A S SQLP+
Subjt:  MVKFYSVFSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFALSTSQLPD
U5DDG3 Uncharacterized protein1.1e-0667.24Show/hide
Query:  MVKFYSVFSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFALSTSQL
        MV+++S+ S VVL+  TASLVVLPLVLPPLPPPP  +LL+PV IL +LLFFALS+S +
Subjt:  MVKFYSVFSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFALSTSQL
SwissProt top hitse value%identityAlignment
C7SFP6 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE1.3e-0454.72Show/hide
Query:  FYSVFSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFALSTS
        ++S+ S V+LV  TASL++LPLVLPPLPPPP  +LLVP+ I+ +L+  A   S
Subjt:  FYSVFSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFALSTS
Q7X6L2 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE3.4e-0562Show/hide
Query:  KFYSVFSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFA
        K++SV S ++LV  TASLV+LPLVLPPLPPPP  ++LVPV +L +LL  A
Subjt:  KFYSVFSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFA
Q8RXL7 ARGOS-like protein1.7e-0452.83Show/hide
Query:  FYSVFSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFALSTS
        ++S+ S VVLV  TASL++LPL+LPPLPPPP  +LL+P+ I+ +L+  A   S
Subjt:  FYSVFSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFALSTS
Arabidopsis top hitse value%identityAlignment
AT2G44080.1 ARGOS-like1.2e-0552.83Show/hide
Query:  FYSVFSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFALSTS
        ++S+ S VVLV  TASL++LPL+LPPLPPPP  +LL+P+ I+ +L+  A   S
Subjt:  FYSVFSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFALSTS
AT3G59900.1 auxin-regulated gene involved in organ size1.0e-0452.83Show/hide
Query:  FYSVFSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFALSTS
        ++S+ S  +LV  TASL++LPLVLPPLPPPP  +LLVP+ I+ +L+  A   S
Subjt:  FYSVFSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFALSTS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAAGTTTTATAGCGTGTTCTCCGGCGTGGTTCTGGTGCTGTGCACGGCGTCGCTGGTGGTGCTGCCGCTGGTGCTGCCGCCGCTTCCTCCGCCGCCATTGCCGGT
CCTTCTTGTGCCTGTTTTTATTTTGGGGATTCTCCTTTTCTTCGCTCTCTCCACTTCTCAACTCCCCGATTCCCCCCTCATTTACTCCACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAAGTTTTATAGCGTGTTCTCCGGCGTGGTTCTGGTGCTGTGCACGGCGTCGCTGGTGGTGCTGCCGCTGGTGCTGCCGCCGCTTCCTCCGCCGCCATTGCCGGT
CCTTCTTGTGCCTGTTTTTATTTTGGGGATTCTCCTTTTCTTCGCTCTCTCCACTTCTCAACTCCCCGATTCCCCCCTCATTTACTCCACCTGA
Protein sequenceShow/hide protein sequence
MVKFYSVFSGVVLVLCTASLVVLPLVLPPLPPPPLPVLLVPVFILGILLFFALSTSQLPDSPLIYST