; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc01g00280 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g00280
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTranscription factor
Genome locationchr1:168189..168893
RNA-Seq ExpressionMoc01g00280
SyntenyMoc01g00280
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR007592 - GLABROUS1 enhancer-binding protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158998.1 probable transcription factor At4g01260 [Momordica charantia]2.2e-12599.57Show/hide
Query:  MATNRYEIEGDDSGTNSKTGSETEDEGSRKMSSLKRGREKDEEKCSSPNSKEESKKSKKMGFHWSWSDECVILKNFYEFAGKNGSYSKDFYHFVKNKLSV
        MATNRYEIEGDDSGTNSKTGSETEDEGSRKMSSLKRGREKDEEKCSSPNSKEESKKSKKMGFHWSWSDECVILKNFYEFAGKNGSYSKDFYHFVKNKLSV
Subjt:  MATNRYEIEGDDSGTNSKTGSETEDEGSRKMSSLKRGREKDEEKCSSPNSKEESKKSKKMGFHWSWSDECVILKNFYEFAGKNGSYSKDFYHFVKNKLSV

Query:  DVSNSQLSDKVYRLRKRFLKDECKGKIRMKFSKGNQLEKLYEMSNNIWGSNSNTQNTQSGGNQWKAEAVNRLCEEMFERVIENVKVDISCIPPNVLKDIR
        DVSNSQLSDKVYRLRKRFLKDECKGKIRMKFSKGNQLEKLYEMSNNIWGSNSNTQNTQSGGNQWKAEAVNRLCEEMFERVIENVKVDISCIPPNVL DIR
Subjt:  DVSNSQLSDKVYRLRKRFLKDECKGKIRMKFSKGNQLEKLYEMSNNIWGSNSNTQNTQSGGNQWKAEAVNRLCEEMFERVIENVKVDISCIPPNVLKDIR

Query:  KDWEQMKMAQDEYELKNANLLLQISHIRCTQNNM
        KDWEQMKMAQDEYELKNANLLLQISHIRCTQNNM
Subjt:  KDWEQMKMAQDEYELKNANLLLQISHIRCTQNNM

XP_022951915.1 probable transcription factor At1g66420 [Cucurbita moschata]4.6e-1429.46Show/hide
Query:  SGTNSKT-GSETEDEGSRKMSSLKRGREKDEEKCSSPNSKEESKKSKKMGFHWSWSDECVILKNFYEFAGKNGSYSKDFYHFVKNKLSVD-VSNSQLSDK
        S  +S+T  S + ++ S     ++    ++ E+ S  N+    K+ K+    W   DE ++L+  Y+F G N SYSK FY FVK +L+ + VS  QLS+K
Subjt:  SGTNSKT-GSETEDEGSRKMSSLKRGREKDEEKCSSPNSKEESKKSKKMGFHWSWSDECVILKNFYEFAGKNGSYSKDFYHFVKNKLSVD-VSNSQLSDK

Query:  VYRLRKRFLKDECKGKIR-MKFSKGNQLEKLYEMSNNIWGSNSNTQNTQSGGNQWKAEAVNRLCEEMFERVIENVKVDISCIPPNVLKDIRKDWEQMKMA
        + R +K +LK+EC+ K   +KFS+ ++ E ++ +S  IWG   +  N   GG    A+         F   +E + +DI C+ P+ L+  +K+WE   + 
Subjt:  VYRLRKRFLKDECKGKIR-MKFSKGNQLEKLYEMSNNIWGSNSNTQNTQSGGNQWKAEAVNRLCEEMFERVIENVKVDISCIPPNVLKDIRKDWEQMKMA

Query:  QDEYELKNANLLLQISHIRCTQNN
          E   K +    ++  +  T+++
Subjt:  QDEYELKNANLLLQISHIRCTQNN

XP_022973281.1 probable transcription factor At1g61730 [Cucurbita maxima]4.2e-1531.94Show/hide
Query:  TEDEGSRKMSSLKRGREKDEEKCSSPNSKEESKKSKKMGFHWSWSDECVILKNFYEFAGKNGSYSKDFYHFVKNKLSVD-VSNSQLSDKVYRLRKRFLKD
        +ED    K    +   E+ EE+ S  N+    K+ K+    W   DE ++L+  YEF G N SYSK FY FVK +LS + VS  Q S+K+ R +K +LK+
Subjt:  TEDEGSRKMSSLKRGREKDEEKCSSPNSKEESKKSKKMGFHWSWSDECVILKNFYEFAGKNGSYSKDFYHFVKNKLSVD-VSNSQLSDKVYRLRKRFLKD

Query:  ECKGKIR-MKFSKGNQLEKLYEMSNNIWGSNSNTQNTQSGGNQWKAEAVNRLCEEMFERVIENVKVDISCIPPNVLKDIRKDWEQMKMAQDEYELKNANL
        EC+ K   +KFS+ ++ E ++ +S  IWG+  +  N   GG    A+         F   +E + +DI C+ P+ L+  +K+WE   +   E   K +  
Subjt:  ECKGKIR-MKFSKGNQLEKLYEMSNNIWGSNSNTQNTQSGGNQWKAEAVNRLCEEMFERVIENVKVDISCIPPNVLKDIRKDWEQMKMAQDEYELKNANL

Query:  ---LLQISHIRCTQNN
           L+++   + + NN
Subjt:  ---LLQISHIRCTQNN

XP_023521141.1 probable transcription factor At1g61730 [Cucurbita pepo subsp. pepo]2.4e-1529.52Show/hide
Query:  SGTNSKT-GSETEDEGSRKMSSLKRGREKDEEKCSSPNSKEESKKSKKMGFHWSWSDECVILKNFYEFAGKNGSYSKDFYHFVKNKLSVD-VSNSQLSDK
        S  +S+T  S + ++ S     ++    ++ E+ S  N+    K+ K+    W   DE ++L+  Y+F G N SYSK FY FVK +L+ + VS +Q+S+K
Subjt:  SGTNSKT-GSETEDEGSRKMSSLKRGREKDEEKCSSPNSKEESKKSKKMGFHWSWSDECVILKNFYEFAGKNGSYSKDFYHFVKNKLSVD-VSNSQLSDK

Query:  VYRLRKRFLKDECKGKIR-MKFSKGNQLEKLYEMSNNIWGSNSNTQNTQSGGNQWKAEAVNRLCEEMFERVIENVKVDISCIPPNVLKDIRKDWEQMKMA
        + R +K +LK+EC+ K+  +KFS+ ++ E ++ +S  IWG   +  N   GG    A+         F   +E + +DI C+ P+ L+  +K+WE   + 
Subjt:  VYRLRKRFLKDECKGKIR-MKFSKGNQLEKLYEMSNNIWGSNSNTQNTQSGGNQWKAEAVNRLCEEMFERVIENVKVDISCIPPNVLKDIRKDWEQMKMA

Query:  QDEYELKNANL---LLQISHIRCTQNN
          E   K +     L+++   + + NN
Subjt:  QDEYELKNANL---LLQISHIRCTQNN

XP_038877618.1 STOREKEEPER protein-like [Benincasa hispida]3.9e-4553.3Show/hide
Query:  KEESKKSKKMGFHWSWSDECVILKNFYEFAGKNGSYSKDFYHFVKNKLSVDVSNSQLSDKVYRLRKRFLK----DECKGKIRMKFSKGNQLEKLYEMSNN
        +EE +  +KM F WS +DEC IL+NFYEFAGKNG+YSK FYHFVK KLS +VSNSQLS KVYRLRKRF+K    D     +R KF      EK++E+S N
Subjt:  KEESKKSKKMGFHWSWSDECVILKNFYEFAGKNGSYSKDFYHFVKNKLSVDVSNSQLSDKVYRLRKRFLK----DECKGKIRMKFSKGNQLEKLYEMSNN

Query:  IWGSN-SNTQNTQSGGN----------QWKAEAVNRLCEEMFERVIENVKVDISCIPPNVLKDIRKDWEQMKMAQDEYELKNANLLLQISHIRCTQN
        IWG +  N ++T  GG           QWK E V R  E+ F+  +EN+K+D++ IP +VL+D+RK+WE ++ A+++YELKNA+LL +IS IRCTQN
Subjt:  IWGSN-SNTQNTQSGGN----------QWKAEAVNRLCEEMFERVIENVKVDISCIPPNVLKDIRKDWEQMKMAQDEYELKNANLLLQISHIRCTQN

TrEMBL top hitse value%identityAlignment
A0A0A0L833 Uncharacterized protein1.1e-1643.38Show/hide
Query:  VKNKLSVDVSNSQLSDKVYRLRKRFL----KDECKGKIRMKFSKGNQLEKLYEMSNNIWGSNSNTQNTQSGGNQWKAEAVNRLCEEMFERVIENVKVDIS
        ++ KLSV+VSNSQLSDKVYRL+KRF+       C       FS  N  +KL+E+S+NIWG   N + ++    +          E++F+  +E +KVDI+
Subjt:  VKNKLSVDVSNSQLSDKVYRLRKRFL----KDECKGKIRMKFSKGNQLEKLYEMSNNIWGSNSNTQNTQSGGNQWKAEAVNRLCEEMFERVIENVKVDIS

Query:  CIPPNVLKDIRKDWEQMKMAQDEYELKNANLLLQIS
         IPP+ L++IRK+WE +  A++ YELK A LL +IS
Subjt:  CIPPNVLKDIRKDWEQMKMAQDEYELKNANLLLQIS

A0A6J1DXL5 probable transcription factor At4g012601.1e-12599.57Show/hide
Query:  MATNRYEIEGDDSGTNSKTGSETEDEGSRKMSSLKRGREKDEEKCSSPNSKEESKKSKKMGFHWSWSDECVILKNFYEFAGKNGSYSKDFYHFVKNKLSV
        MATNRYEIEGDDSGTNSKTGSETEDEGSRKMSSLKRGREKDEEKCSSPNSKEESKKSKKMGFHWSWSDECVILKNFYEFAGKNGSYSKDFYHFVKNKLSV
Subjt:  MATNRYEIEGDDSGTNSKTGSETEDEGSRKMSSLKRGREKDEEKCSSPNSKEESKKSKKMGFHWSWSDECVILKNFYEFAGKNGSYSKDFYHFVKNKLSV

Query:  DVSNSQLSDKVYRLRKRFLKDECKGKIRMKFSKGNQLEKLYEMSNNIWGSNSNTQNTQSGGNQWKAEAVNRLCEEMFERVIENVKVDISCIPPNVLKDIR
        DVSNSQLSDKVYRLRKRFLKDECKGKIRMKFSKGNQLEKLYEMSNNIWGSNSNTQNTQSGGNQWKAEAVNRLCEEMFERVIENVKVDISCIPPNVL DIR
Subjt:  DVSNSQLSDKVYRLRKRFLKDECKGKIRMKFSKGNQLEKLYEMSNNIWGSNSNTQNTQSGGNQWKAEAVNRLCEEMFERVIENVKVDISCIPPNVLKDIR

Query:  KDWEQMKMAQDEYELKNANLLLQISHIRCTQNNM
        KDWEQMKMAQDEYELKNANLLLQISHIRCTQNNM
Subjt:  KDWEQMKMAQDEYELKNANLLLQISHIRCTQNNM

A0A6J1E125 probable transcription factor At4g006102.9e-1433.5Show/hide
Query:  DDSGTNSKTGSETEDEGSRKMSSLKRGREKDEEKCSSPNSKEESKKSKKMGFHWSWSDECVILKNFYEFAGKNGSYSKDFYHFVKNKLSVDVSNSQLSDK
        D+  ++++   E+E E   +    +R R +   K   P +K   KK   + F W   DE  +LK  YEF+GKN +YS++FY FVK KL   VS  Q+ +K
Subjt:  DDSGTNSKTGSETEDEGSRKMSSLKRGREKDEEKCSSPNSKEESKKSKKMGFHWSWSDECVILKNFYEFAGKNGSYSKDFYHFVKNKLSVDVSNSQLSDK

Query:  VYRLRKRFLK-DECKGKIRMKF-SKGNQ--LEKLYEMSNNIWGS--NSNTQNTQSGGNQWKAEAVNRLCEEMFERVIENVKVDISCIPPNVLKDIRKDWE
        +  LR+++L+ DEC G   +KF   G+Q    K+   S  IWG+  N N    ++GG     E      E  F   +E +++++ C+ P+ L+ + KDWE
Subjt:  VYRLRKRFLK-DECKGKIRMKF-SKGNQ--LEKLYEMSNNIWGS--NSNTQNTQSGGNQWKAEAVNRLCEEMFERVIENVKVDISCIPPNVLKDIRKDWE

A0A6J1GK86 probable transcription factor At1g664202.2e-1429.46Show/hide
Query:  SGTNSKT-GSETEDEGSRKMSSLKRGREKDEEKCSSPNSKEESKKSKKMGFHWSWSDECVILKNFYEFAGKNGSYSKDFYHFVKNKLSVD-VSNSQLSDK
        S  +S+T  S + ++ S     ++    ++ E+ S  N+    K+ K+    W   DE ++L+  Y+F G N SYSK FY FVK +L+ + VS  QLS+K
Subjt:  SGTNSKT-GSETEDEGSRKMSSLKRGREKDEEKCSSPNSKEESKKSKKMGFHWSWSDECVILKNFYEFAGKNGSYSKDFYHFVKNKLSVD-VSNSQLSDK

Query:  VYRLRKRFLKDECKGKIR-MKFSKGNQLEKLYEMSNNIWGSNSNTQNTQSGGNQWKAEAVNRLCEEMFERVIENVKVDISCIPPNVLKDIRKDWEQMKMA
        + R +K +LK+EC+ K   +KFS+ ++ E ++ +S  IWG   +  N   GG    A+         F   +E + +DI C+ P+ L+  +K+WE   + 
Subjt:  VYRLRKRFLKDECKGKIR-MKFSKGNQLEKLYEMSNNIWGSNSNTQNTQSGGNQWKAEAVNRLCEEMFERVIENVKVDISCIPPNVLKDIRKDWEQMKMA

Query:  QDEYELKNANLLLQISHIRCTQNN
          E   K +    ++  +  T+++
Subjt:  QDEYELKNANLLLQISHIRCTQNN

A0A6J1I882 probable transcription factor At1g617302.0e-1531.94Show/hide
Query:  TEDEGSRKMSSLKRGREKDEEKCSSPNSKEESKKSKKMGFHWSWSDECVILKNFYEFAGKNGSYSKDFYHFVKNKLSVD-VSNSQLSDKVYRLRKRFLKD
        +ED    K    +   E+ EE+ S  N+    K+ K+    W   DE ++L+  YEF G N SYSK FY FVK +LS + VS  Q S+K+ R +K +LK+
Subjt:  TEDEGSRKMSSLKRGREKDEEKCSSPNSKEESKKSKKMGFHWSWSDECVILKNFYEFAGKNGSYSKDFYHFVKNKLSVD-VSNSQLSDKVYRLRKRFLKD

Query:  ECKGKIR-MKFSKGNQLEKLYEMSNNIWGSNSNTQNTQSGGNQWKAEAVNRLCEEMFERVIENVKVDISCIPPNVLKDIRKDWEQMKMAQDEYELKNANL
        EC+ K   +KFS+ ++ E ++ +S  IWG+  +  N   GG    A+         F   +E + +DI C+ P+ L+  +K+WE   +   E   K +  
Subjt:  ECKGKIR-MKFSKGNQLEKLYEMSNNIWGSNSNTQNTQSGGNQWKAEAVNRLCEEMFERVIENVKVDISCIPPNVLKDIRKDWEQMKMAQDEYELKNANL

Query:  ---LLQISHIRCTQNN
           L+++   + + NN
Subjt:  ---LLQISHIRCTQNN

SwissProt top hitse value%identityAlignment
O04608 Probable transcription factor At4g012604.1e-0532.93Show/hide
Query:  DSGTNSKTGSETEDEGSRKMSSLKRGREKDEEKCSSPNSKEESKKSKKMGFHWSWSDECVILKNFYEFAGKN---GSYSKDFYHFVKNKLSVDVSNSQLS
        +S T +K   E  DE S+K S    G E+D +K      K+E+ K       ++  DE ++L+ F +FA K      +  DFY  +KN +S DV+  QL 
Subjt:  DSGTNSKTGSETEDEGSRKMSSLKRGREKDEEKCSSPNSKEESKKSKKMGFHWSWSDECVILKNFYEFAGKN---GSYSKDFYHFVKNKLSVDVSNSQLS

Query:  DKVYRLRKRF----LKDECKGKIR--MKFSKGNQLEKLYEMSNNIWGSN-------SNTQNTQSGGN
         K+  L+K+F     K   KGK    M FSK +  +  +++S  IWGSN        N +  Q GG+
Subjt:  DKVYRLRKRF----LKDECKGKIR--MKFSKGNQLEKLYEMSNNIWGSN-------SNTQNTQSGGN

Q94IK2 STOREKEEPER protein9.0e-0532.59Show/hide
Query:  EKDEEKCSSPNSKEESKKSKKMGFH-WSWSDECVILKNFYEFAGKNG----SYSKDFYHFVKNKLSVDVSNSQLSDKVYRLRKRFLKDECKGKIRMKFSK
        +K++ K     ++EE KKS       WS  D+  +LK   E+    G    +    F+ F++ KL  +VS SQ+SDKV RL+K+FL +   G+    F K
Subjt:  EKDEEKCSSPNSKEESKKSKKMGFH-WSWSDECVILKNFYEFAGKNG----SYSKDFYHFVKNKLSVDVSNSQLSDKVYRLRKRFLKDECKGKIRMKFSK

Query:  GNQLEKLYEMSNNIWGS--------NSNTQNTQSG
        G     ++E S  IWG+          N  NT +G
Subjt:  GNQLEKLYEMSNNIWGS--------NSNTQNTQSG

Arabidopsis top hitse value%identityAlignment
AT4G00390.1 DNA-binding storekeeper protein-related transcriptional regulator2.7e-0427.32Show/hide
Query:  SGTNSKTGSETEDEGSRKMSSL-----KRGREKDEEKCSSPNSK------EESKKSKKMGFHWSWSDECVILKNFYEFAGKNG-SYSKD---FYHFVKNK
        SG+     S+ +D+ S   ++L     K G ++   + ++ ++K      E  KK       WS  DE  +L+   ++    G S S D   FY F K  
Subjt:  SGTNSKTGSETEDEGSRKMSSL-----KRGREKDEEKCSSPNSK------EESKKSKKMGFHWSWSDECVILKNFYEFAGKNG-SYSKD---FYHFVKNK

Query:  LSVDVSNSQLSDKVYRLRKRFLKDECKGKIRMKFSKGNQLEKLYEMSNNIWGSNSNTQNTQSGGNQWKAEAVNRLCEEMFERVIENVKVDISCI
        +S +VS SQ SDKV  LRK++   E  GK   +F K +  +K +E+S  IWG      ++ +     K+  V++      +  +++VK D++ +
Subjt:  LSVDVSNSQLSDKVYRLRKRFLKDECKGKIRMKFSKGNQLEKLYEMSNNIWGSNSNTQNTQSGGNQWKAEAVNRLCEEMFERVIENVKVDISCI

AT4G01260.1 DNA-binding storekeeper protein-related transcriptional regulator2.9e-0632.93Show/hide
Query:  DSGTNSKTGSETEDEGSRKMSSLKRGREKDEEKCSSPNSKEESKKSKKMGFHWSWSDECVILKNFYEFAGKN---GSYSKDFYHFVKNKLSVDVSNSQLS
        +S T +K   E  DE S+K S    G E+D +K      K+E+ K       ++  DE ++L+ F +FA K      +  DFY  +KN +S DV+  QL 
Subjt:  DSGTNSKTGSETEDEGSRKMSSLKRGREKDEEKCSSPNSKEESKKSKKMGFHWSWSDECVILKNFYEFAGKN---GSYSKDFYHFVKNKLSVDVSNSQLS

Query:  DKVYRLRKRF----LKDECKGKIR--MKFSKGNQLEKLYEMSNNIWGSN-------SNTQNTQSGGN
         K+  L+K+F     K   KGK    M FSK +  +  +++S  IWGSN        N +  Q GG+
Subjt:  DKVYRLRKRF----LKDECKGKIR--MKFSKGNQLEKLYEMSNNIWGSN-------SNTQNTQSGGN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACAAATCGTTATGAGATCGAAGGCGATGATTCGGGGACGAACAGTAAAACAGGGTCGGAAACCGAAGACGAGGGTTCCCGAAAAATGTCATCCTTAAAACGTGG
AAGAGAGAAAGACGAGGAGAAATGCAGCAGTCCAAACTCAAAGGAAGAATCAAAGAAATCAAAGAAGATGGGTTTTCATTGGAGTTGGAGCGATGAATGTGTAATCTTGA
AGAACTTTTATGAATTTGCAGGTAAAAACGGGAGTTACTCCAAGGATTTTTACCATTTTGTGAAGAACAAGTTGAGTGTGGATGTCTCTAATTCTCAACTCTCAGATAAA
GTGTATCGGTTGAGGAAGAGATTCTTGAAAGATGAATGCAAGGGAAAAATAAGGATGAAATTTTCAAAGGGCAACCAGCTGGAGAAGTTGTACGAGATGTCAAACAACAT
TTGGGGTTCCAATTCCAATACCCAAAATACCCAAAGTGGAGGGAATCAGTGGAAGGCTGAAGCAGTGAATCGGTTGTGTGAAGAAATGTTTGAACGCGTTATAGAGAATG
TGAAGGTGGACATCAGTTGCATACCACCTAACGTTTTGAAAGACATCAGGAAAGATTGGGAGCAAATGAAGATGGCACAAGATGAATATGAATTGAAGAATGCCAACTTA
CTCCTTCAAATCTCCCACATAAGATGCACTCAAAACAACATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACAAATCGTTATGAGATCGAAGGCGATGATTCGGGGACGAACAGTAAAACAGGGTCGGAAACCGAAGACGAGGGTTCCCGAAAAATGTCATCCTTAAAACGTGG
AAGAGAGAAAGACGAGGAGAAATGCAGCAGTCCAAACTCAAAGGAAGAATCAAAGAAATCAAAGAAGATGGGTTTTCATTGGAGTTGGAGCGATGAATGTGTAATCTTGA
AGAACTTTTATGAATTTGCAGGTAAAAACGGGAGTTACTCCAAGGATTTTTACCATTTTGTGAAGAACAAGTTGAGTGTGGATGTCTCTAATTCTCAACTCTCAGATAAA
GTGTATCGGTTGAGGAAGAGATTCTTGAAAGATGAATGCAAGGGAAAAATAAGGATGAAATTTTCAAAGGGCAACCAGCTGGAGAAGTTGTACGAGATGTCAAACAACAT
TTGGGGTTCCAATTCCAATACCCAAAATACCCAAAGTGGAGGGAATCAGTGGAAGGCTGAAGCAGTGAATCGGTTGTGTGAAGAAATGTTTGAACGCGTTATAGAGAATG
TGAAGGTGGACATCAGTTGCATACCACCTAACGTTTTGAAAGACATCAGGAAAGATTGGGAGCAAATGAAGATGGCACAAGATGAATATGAATTGAAGAATGCCAACTTA
CTCCTTCAAATCTCCCACATAAGATGCACTCAAAACAACATGTAA
Protein sequenceShow/hide protein sequence
MATNRYEIEGDDSGTNSKTGSETEDEGSRKMSSLKRGREKDEEKCSSPNSKEESKKSKKMGFHWSWSDECVILKNFYEFAGKNGSYSKDFYHFVKNKLSVDVSNSQLSDK
VYRLRKRFLKDECKGKIRMKFSKGNQLEKLYEMSNNIWGSNSNTQNTQSGGNQWKAEAVNRLCEEMFERVIENVKVDISCIPPNVLKDIRKDWEQMKMAQDEYELKNANL
LLQISHIRCTQNNM