; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc01g00340 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc01g00340
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDNA-binding storekeeper protein-related transcriptional regulator
Genome locationchr1:177670..178368
RNA-Seq ExpressionMoc01g00340
SyntenyMoc01g00340
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR007592 - GLABROUS1 enhancer-binding protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585873.1 putative transcription factor, partial [Cucurbita argyrosperma subsp. sororia]2.5e-3646.12Show/hide
Query:  NSSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKPKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSEEFYEFVKKKL-GGQVSMHQMRNKI
        NS   E +SD+EY++E ES  +SE++ +            +KK+      +W EEDE+ VL+QLY+F G NA+YS+ FYEFVKK+L   QVSMHQ+ NKI
Subjt:  NSSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKPKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSEEFYEFVKKKL-GGQVSMHQMRNKI

Query:  RGLRRKYLENDEC----NGLKFCGSGSQQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVESLEEMEIEMDCLKPSCLEFLYKDWEIQTL
           +++YL+N EC    N LKF    S+ H+ +V   S+RIWG        ++K+ GG     +Y +GF+E LEEM+I++DCL PSCLE   K+WE+Q L
Subjt:  RGLRRKYLENDEC----NGLKFCGSGSQQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVESLEEMEIEMDCLKPSCLEFLYKDWEIQTL

Query:  MHVQLLSNKCKLDAKLTEL
        M+++LLS K K DAKL EL
Subjt:  MHVQLLSNKCKLDAKLTEL

XP_022158994.1 probable transcription factor At4g00610 [Momordica charantia]1.7e-122100Show/hide
Query:  MSEYYSNSSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKPKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSEEFYEFVKKKLGGQVSMHQ
        MSEYYSNSSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKPKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSEEFYEFVKKKLGGQVSMHQ
Subjt:  MSEYYSNSSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKPKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSEEFYEFVKKKLGGQVSMHQ

Query:  MRNKIRGLRRKYLENDECNGLKFCGSGSQQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVESLEEMEIEMDCLKPSCLEFLYKDWEIQT
        MRNKIRGLRRKYLENDECNGLKFCGSGSQQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVESLEEMEIEMDCLKPSCLEFLYKDWEIQT
Subjt:  MRNKIRGLRRKYLENDECNGLKFCGSGSQQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVESLEEMEIEMDCLKPSCLEFLYKDWEIQT

Query:  LMHVQLLSNKCKLDAKLTELCIQFLNTPTNTK
        LMHVQLLSNKCKLDAKLTELCIQFLNTPTNTK
Subjt:  LMHVQLLSNKCKLDAKLTELCIQFLNTPTNTK

XP_022951915.1 probable transcription factor At1g66420 [Cucurbita moschata]3.2e-3646.12Show/hide
Query:  NSSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKPKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSEEFYEFVKKKL-GGQVSMHQMRNKI
        NS   E +SD+EY++E ES  +SE++ +            +KK+      +W EEDE+ VL+QLY+F G NA+YS+ FYEFVKK+L   QVSMHQ+ NKI
Subjt:  NSSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKPKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSEEFYEFVKKKL-GGQVSMHQMRNKI

Query:  RGLRRKYLENDEC----NGLKFCGSGSQQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVESLEEMEIEMDCLKPSCLEFLYKDWEIQTL
           +++YL+N EC    N LKF    S+ H+ +V   S+RIWG        ++K+ GG     +Y +GF+E LEEM+I++DCL PSCLE   K+WE+Q L
Subjt:  RGLRRKYLENDEC----NGLKFCGSGSQQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVESLEEMEIEMDCLKPSCLEFLYKDWEIQTL

Query:  MHVQLLSNKCKLDAKLTEL
        M+++LLS K K DAKL EL
Subjt:  MHVQLLSNKCKLDAKLTEL

XP_022973281.1 probable transcription factor At1g61730 [Cucurbita maxima]2.5e-3647.03Show/hide
Query:  NSSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKPKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSEEFYEFVKKKL-GGQVSMHQMRNKI
        NS   E +SD++Y++E ES  +SE++     +   H+  K  K++     +W+EEDE+ VL+QLYEF G NA+YS+ FYEFVKK+L   QVSMHQ  NKI
Subjt:  NSSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKPKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSEEFYEFVKKKL-GGQVSMHQMRNKI

Query:  RGLRRKYLENDEC----NGLKFCGSGSQQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVESLEEMEIEMDCLKPSCLEFLYKDWEIQTL
           +++YL+N EC    N LKF    S+ H+ +V   SKRIWGA  +++     NGGG +    Y +GF+E LEEM+I++DCL PSCLE   K+WE+Q L
Subjt:  RGLRRKYLENDEC----NGLKFCGSGSQQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVESLEEMEIEMDCLKPSCLEFLYKDWEIQTL

Query:  MHVQLLSNKCKLDAKLTEL
        M+++LLS K K + KL EL
Subjt:  MHVQLLSNKCKLDAKLTEL

XP_023521141.1 probable transcription factor At1g61730 [Cucurbita pepo subsp. pepo]2.5e-3645.87Show/hide
Query:  NSSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKPKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSEEFYEFVKKKL-GGQVSMHQMRNKI
        NS   E +SD+EY++E ES  +SE++ +R           +KK+      +W EEDE+ VL+QLY+F G NA+YS+ FYEFVKK+L   QVSM+QM NKI
Subjt:  NSSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKPKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSEEFYEFVKKKL-GGQVSMHQMRNKI

Query:  RGLRRKYLEND---ECNGLKFCGSGSQQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVESLEEMEIEMDCLKPSCLEFLYKDWEIQTLM
           +++YL+N+   + N LKF    S+ H+ +V   S+RIWG        ++K+ GG     +Y +GF E LEEM+I++DCL PSCLE   K+WE+Q LM
Subjt:  RGLRRKYLEND---ECNGLKFCGSGSQQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVESLEEMEIEMDCLKPSCLEFLYKDWEIQTLM

Query:  HVQLLSNKCKLDAKLTEL
        +++LLS K K DAKL EL
Subjt:  HVQLLSNKCKLDAKLTEL

TrEMBL top hitse value%identityAlignment
A0A6A5ML47 Putative transcription factor GeBP family1.9e-0530.63Show/hide
Query:  SEDEQRRRRRRRRHTKPKTKKKKAALSFK-----WREEDEVFVLKQLYEFSGKNA----TYSEEFYEFVKKKLGGQVSMHQMRNKIRGLRRKYLENDECN
        ++++ +R +++  +   +  KK    S K     W EEDE+ +LK + EF+ K       Y+E FYEFVKK L  + S +Q++ KIR L+RK+  N    
Subjt:  SEDEQRRRRRRRRHTKPKTKKKKAALSFK-----WREEDEVFVLKQLYEFSGKNA----TYSEEFYEFVKKKLGGQVSMHQMRNKIRGLRRKYLENDECN

Query:  GLKFCGSGSQQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVESLEEMEI
              + S+Q  R+    SK++WG A         +GGG + V+    G V + ++ E+
Subjt:  GLKFCGSGSQQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVESLEEMEI

A0A6J1DXL5 probable transcription factor At4g012607.1e-1333.5Show/hide
Query:  DERSSDTEYRVESESESDSEDEQRRRRRRRRHTK---PKTK---KKKAALSFKWREEDEVFVLKQLYEFSGKNATYSEEFYEFVKKKLGGQVSMHQMRNK
        D+  ++++   E+E E   +    +R R +   K   P +K   KK   + F W   DE  +LK  YEF+GKN +YS++FY FVK KL   VS  Q+ +K
Subjt:  DERSSDTEYRVESESESDSEDEQRRRRRRRRHTK---PKTK---KKKAALSFKWREEDEVFVLKQLYEFSGKNATYSEEFYEFVKKKLGGQVSMHQMRNK

Query:  IRGLRRKYLENDECNG---LKFCGSGSQQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQY----ERGFVESLEEMEIEMDCLKPSCLEFLYKDWE
        +  LR+++L+ DEC G   +KF   G+Q    K+   S  IWG+  N N    ++GG     E      E  F   +E +++++ C+ P+ L  + KDWE
Subjt:  IRGLRRKYLENDECNG---LKFCGSGSQQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQY----ERGFVESLEEMEIEMDCLKPSCLEFLYKDWE

A0A6J1E125 probable transcription factor At4g006108.4e-123100Show/hide
Query:  MSEYYSNSSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKPKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSEEFYEFVKKKLGGQVSMHQ
        MSEYYSNSSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKPKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSEEFYEFVKKKLGGQVSMHQ
Subjt:  MSEYYSNSSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKPKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSEEFYEFVKKKLGGQVSMHQ

Query:  MRNKIRGLRRKYLENDECNGLKFCGSGSQQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVESLEEMEIEMDCLKPSCLEFLYKDWEIQT
        MRNKIRGLRRKYLENDECNGLKFCGSGSQQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVESLEEMEIEMDCLKPSCLEFLYKDWEIQT
Subjt:  MRNKIRGLRRKYLENDECNGLKFCGSGSQQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVESLEEMEIEMDCLKPSCLEFLYKDWEIQT

Query:  LMHVQLLSNKCKLDAKLTELCIQFLNTPTNTK
        LMHVQLLSNKCKLDAKLTELCIQFLNTPTNTK
Subjt:  LMHVQLLSNKCKLDAKLTELCIQFLNTPTNTK

A0A6J1GK86 probable transcription factor At1g664201.6e-3646.12Show/hide
Query:  NSSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKPKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSEEFYEFVKKKL-GGQVSMHQMRNKI
        NS   E +SD+EY++E ES  +SE++ +            +KK+      +W EEDE+ VL+QLY+F G NA+YS+ FYEFVKK+L   QVSMHQ+ NKI
Subjt:  NSSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKPKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSEEFYEFVKKKL-GGQVSMHQMRNKI

Query:  RGLRRKYLENDEC----NGLKFCGSGSQQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVESLEEMEIEMDCLKPSCLEFLYKDWEIQTL
           +++YL+N EC    N LKF    S+ H+ +V   S+RIWG        ++K+ GG     +Y +GF+E LEEM+I++DCL PSCLE   K+WE+Q L
Subjt:  RGLRRKYLENDEC----NGLKFCGSGSQQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVESLEEMEIEMDCLKPSCLEFLYKDWEIQTL

Query:  MHVQLLSNKCKLDAKLTEL
        M+++LLS K K DAKL EL
Subjt:  MHVQLLSNKCKLDAKLTEL

A0A6J1I882 probable transcription factor At1g617301.2e-3647.03Show/hide
Query:  NSSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKPKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSEEFYEFVKKKL-GGQVSMHQMRNKI
        NS   E +SD++Y++E ES  +SE++     +   H+  K  K++     +W+EEDE+ VL+QLYEF G NA+YS+ FYEFVKK+L   QVSMHQ  NKI
Subjt:  NSSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKPKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSEEFYEFVKKKL-GGQVSMHQMRNKI

Query:  RGLRRKYLENDEC----NGLKFCGSGSQQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVESLEEMEIEMDCLKPSCLEFLYKDWEIQTL
           +++YL+N EC    N LKF    S+ H+ +V   SKRIWGA  +++     NGGG +    Y +GF+E LEEM+I++DCL PSCLE   K+WE+Q L
Subjt:  RGLRRKYLENDEC----NGLKFCGSGSQQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVESLEEMEIEMDCLKPSCLEFLYKDWEIQTL

Query:  MHVQLLSNKCKLDAKLTEL
        M+++LLS K K + KL EL
Subjt:  MHVQLLSNKCKLDAKLTEL

SwissProt top hitse value%identityAlignment
Q9SYA9 Probable transcription factor At1g617307.3e-0734.17Show/hide
Query:  KKKAALSFKWREEDEVFVLKQLYEF---SGKNA-TYSEEFYEFVKKKLGGQVSMHQMRNKIRGLRRKYLENDECNGLKFCGSGSQQHQRKVLAWSKRIWG
        KK       W EEDE+ VL+ + +F   +GK+    +  FY+F+KK +  +VS +Q  +KIR LR+KY+  +  N   F     + H +K    SK IWG
Subjt:  KKKAALSFKWREEDEVFVLKQLYEF---SGKNA-TYSEEFYEFVKKKLGGQVSMHQMRNKIRGLRRKYLENDECNGLKFCGSGSQQHQRKVLAWSKRIWG

Query:  AAENE-NENKNKNGGGTRSV
              + N   NG   +SV
Subjt:  AAENE-NENKNKNGGGTRSV

Arabidopsis top hitse value%identityAlignment
AT1G61730.1 DNA-binding storekeeper protein-related transcriptional regulator5.2e-0834.17Show/hide
Query:  KKKAALSFKWREEDEVFVLKQLYEF---SGKNA-TYSEEFYEFVKKKLGGQVSMHQMRNKIRGLRRKYLENDECNGLKFCGSGSQQHQRKVLAWSKRIWG
        KK       W EEDE+ VL+ + +F   +GK+    +  FY+F+KK +  +VS +Q  +KIR LR+KY+  +  N   F     + H +K    SK IWG
Subjt:  KKKAALSFKWREEDEVFVLKQLYEF---SGKNA-TYSEEFYEFVKKKLGGQVSMHQMRNKIRGLRRKYLENDECNGLKFCGSGSQQHQRKVLAWSKRIWG

Query:  AAENE-NENKNKNGGGTRSV
              + N   NG   +SV
Subjt:  AAENE-NENKNKNGGGTRSV

AT4G00250.1 DNA-binding storekeeper protein-related transcriptional regulator1.1e-0530.28Show/hide
Query:  RHTKPKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNAT----YSEEFYEFVKKKLGGQVSMHQMRNKIRGLRRKYLENDECNGLKFCGSGSQQHQRKVL
        +  K +   KKA     W EEDE+ +L+ + +F  +  T    +   F++  KK +   VS  Q  +KIR L+ KY  N +        SG   H +K L
Subjt:  RHTKPKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNAT----YSEEFYEFVKKKLGGQVSMHQMRNKIRGLRRKYLENDECNGLKFCGSGSQQHQRKVL

Query:  AWSKRIWGA
          +  IWG+
Subjt:  AWSKRIWGA

AT4G00610.1 DNA-binding storekeeper protein-related transcriptional regulator3.5e-0429.03Show/hide
Query:  EDERSSDTEYRVESESESDSE------------DEQR----RRRRRRRHTKPKTKKKKAALSFKWREEDEVFVLKQLYEF---SGKNATYS-EEFYEFVK
        EDE SSD+E   ESES++++E            +E+R    +    R  T+ +T KK       W +EDE+  L+ + +F   +GKN +     F+E +K
Subjt:  EDERSSDTEYRVESESESDSE------------DEQR----RRRRRRRHTKPKTKKKKAALSFKWREEDEVFVLKQLYEF---SGKNATYS-EEFYEFVK

Query:  KKLGGQVSMHQMRNKIRGLRRKYLENDECNGLKFCGSGSQQHQRKVLAWSKRIW---GAAENENENKNKNGGGTRSVEQYERGFVE
          +  +V   Q  NKIR ++RKY+EN +          + +H +K    ++ IW   G A    + K K        + +ER FV+
Subjt:  KKLGGQVSMHQMRNKIRGLRRKYLENDECNGLKFCGSGSQQHQRKVLAWSKRIW---GAAENENENKNKNGGGTRSVEQYERGFVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGAATATTATTCTAATTCAAGTGAGGACGAGAGATCATCAGACACAGAGTACAGAGTGGAGTCTGAGAGTGAATCGGATTCGGAAGACGAACAGCGTCGC
CGAAGAAGAAGAAGAAGGCACACGAAACCGAAAACAAAGAAAAAGAAAGCTGCATTATCATTCAAATGGCGGGAAGAGGATGAAGTGTTTGTGTTGAAACAACTG
TATGAATTCTCAGGGAAGAACGCGACGTATTCGGAGGAGTTCTATGAATTTGTGAAGAAGAAATTAGGCGGCCAAGTTTCGATGCATCAGATGAGGAACAAAATA
CGTGGGTTGAGAAGGAAATATTTGGAGAATGATGAGTGCAATGGCCTCAAATTCTGTGGGTCTGGGTCTCAACAGCACCAACGGAAGGTGCTTGCATGGTCGAAG
AGAATATGGGGAGCAGCCGAGAACGAGAACGAGAACAAAAACAAGAACGGAGGAGGCACACGCAGCGTGGAGCAATATGAAAGAGGATTTGTGGAGTCTCTTGAG
GAGATGGAGATTGAGATGGATTGTTTGAAGCCTTCATGTTTGGAATTTCTTTACAAGGACTGGGAAATTCAAACACTTATGCACGTTCAGCTTTTGTCCAACAAG
TGCAAGTTGGATGCCAAGCTCACGGAATTGTGTATCCAATTTCTAAACACCCCGACCAATACTAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGAATATTATTCTAATTCAAGTGAGGACGAGAGATCATCAGACACAGAGTACAGAGTGGAGTCTGAGAGTGAATCGGATTCGGAAGACGAACAGCGTCGC
CGAAGAAGAAGAAGAAGGCACACGAAACCGAAAACAAAGAAAAAGAAAGCTGCATTATCATTCAAATGGCGGGAAGAGGATGAAGTGTTTGTGTTGAAACAACTG
TATGAATTCTCAGGGAAGAACGCGACGTATTCGGAGGAGTTCTATGAATTTGTGAAGAAGAAATTAGGCGGCCAAGTTTCGATGCATCAGATGAGGAACAAAATA
CGTGGGTTGAGAAGGAAATATTTGGAGAATGATGAGTGCAATGGCCTCAAATTCTGTGGGTCTGGGTCTCAACAGCACCAACGGAAGGTGCTTGCATGGTCGAAG
AGAATATGGGGAGCAGCCGAGAACGAGAACGAGAACAAAAACAAGAACGGAGGAGGCACACGCAGCGTGGAGCAATATGAAAGAGGATTTGTGGAGTCTCTTGAG
GAGATGGAGATTGAGATGGATTGTTTGAAGCCTTCATGTTTGGAATTTCTTTACAAGGACTGGGAAATTCAAACACTTATGCACGTTCAGCTTTTGTCCAACAAG
TGCAAGTTGGATGCCAAGCTCACGGAATTGTGTATCCAATTTCTAAACACCCCGACCAATACTAAATAA
Protein sequenceShow/hide protein sequence
MSEYYSNSSEDERSSDTEYRVESESESDSEDEQRRRRRRRRHTKPKTKKKKAALSFKWREEDEVFVLKQLYEFSGKNATYSEEFYEFVKKKLGGQVSMHQMRNKI
RGLRRKYLENDECNGLKFCGSGSQQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVESLEEMEIEMDCLKPSCLEFLYKDWEIQTLMHVQLLSNK
CKLDAKLTELCIQFLNTPTNTK